Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 468 |
| AccI | GTMKAC | 1 cut(s) | 233 |
| AciI | CCGC | 1 cut(s) | 454 |
| AclWI | GGATC | 2 cut(s) | 104, 117 |
| AfaI | GTAC | 2 cut(s) | 184, 537 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 104, 160, 468 |
| AgsI | TTSAA | 2 cut(s) | 122, 284 |
| AjnI | CCWGG | 1 cut(s) | 493 |
| AluBI | AGCT | 6 cut(s) | 8, 62, 70, 269, 357, 421 |
| AluI | AGCT | 6 cut(s) | 8, 62, 70, 269, 357, 421 |
| AlwI | GGATC | 2 cut(s) | 104, 117 |
| Ama87I | CYCGRG | 1 cut(s) | 312 |
| AoxI | GGCC | 2 cut(s) | 387, 540 |
| ApeKI | GCWGC | 5 cut(s) | 92, 130, 269, 376, 421 |
| AspS9I | GGNCC | 1 cut(s) | 387 |
| AsuHPI | GGTGA | 2 cut(s) | 251, 396 |
| AvaI | CYCGRG | 1 cut(s) | 312 |
| BamHI | GGATCC | 1 cut(s) | 109 |
| BanII | GRGCYC | 1 cut(s) | 494 |
| BauI | CACGAG | 2 cut(s) | 63, 524 |
| BbvI | GCAGC | 5 cut(s) | 79, 142, 256, 363, 408 |
| BccI | CCATC | 2 cut(s) | 171, 205 |
| BciT130I | CCWGG | 1 cut(s) | 495 |
| BfaI | CTAG | 3 cut(s) | 207, 354, 500 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BisI | GCNGC | 5 cut(s) | 93, 131, 270, 377, 422 |
| BlsI | GCNGC | 5 cut(s) | 94, 132, 271, 378, 423 |
| Bme1390I | CCNGG | 1 cut(s) | 495 |
| BmeT110I | CYCGRG | 1 cut(s) | 312 |
| BmgT120I | GGNCC | 1 cut(s) | 387 |
| BmiI | GGNNCC | 1 cut(s) | 111 |
| BmrFI | CCNGG | 1 cut(s) | 495 |
| BmrI | ACTGGG | 2 cut(s) | 114, 478 |
| BmsI | GCATC | 2 cut(s) | 316, 515 |
| BmuI | ACTGGG | 2 cut(s) | 114, 478 |
| BpmI | CTGGAG | 1 cut(s) | 401 |
| BpuEI | CTTGAG | 1 cut(s) | 249 |
| BsaAI | YACGTR | 1 cut(s) | 535 |
| BsaJI | CCNNGG | 3 cut(s) | 362, 467, 493 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 104, 160, 468 |
| Bse1I | ACTGG | 2 cut(s) | 109, 484 |
| Bse3DI | GCAATG | 2 cut(s) | 88, 463 |
| BseBI | CCWGG | 1 cut(s) | 495 |
| BseDI | CCNNGG | 3 cut(s) | 362, 467, 493 |
| BseGI | GGATG | 4 cut(s) | 182, 216, 322, 331 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 104, 160, 468 |
| BseMI | GCAATG | 2 cut(s) | 88, 463 |
| BseNI | ACTGG | 2 cut(s) | 109, 484 |
| BseRI | GAGGAG | 1 cut(s) | 321 |
| BseXI | GCAGC | 5 cut(s) | 79, 142, 256, 363, 408 |
| BsgI | GTGCAG | 1 cut(s) | 78 |
| BshFI | GGCC | 2 cut(s) | 389, 542 |
| BsiHKCI | CYCGRG | 1 cut(s) | 312 |
| BslFI | GGGAC | 1 cut(s) | 137 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 104, 160, 468 |
| BsmFI | GGGAC | 1 cut(s) | 137 |
| BsnI | GGCC | 2 cut(s) | 389, 542 |
| BsoBI | CYCGRG | 1 cut(s) | 312 |
| Bsp1286I | GDGCHC | 1 cut(s) | 494 |
| Bsp143I | GATC | 1 cut(s) | 109 |
| Bsp19I | CCATGG | 2 cut(s) | 362, 467 |
| BspACI | CCGC | 1 cut(s) | 454 |
| BspANI | GGCC | 2 cut(s) | 389, 542 |
| BspLI | GGNNCC | 1 cut(s) | 111 |
| BspMAI | CTGCAG | 1 cut(s) | 274 |
| BspPI | GGATC | 2 cut(s) | 104, 117 |
| BsrDI | GCAATG | 2 cut(s) | 88, 463 |
| BsrI | ACTGG | 2 cut(s) | 109, 484 |
| BssECI | CCNNGG | 3 cut(s) | 362, 467, 493 |
| BssMI | GATC | 1 cut(s) | 109 |
| BssNAI | GTATAC | 1 cut(s) | 234 |
| BssSI | CACGAG | 2 cut(s) | 63, 524 |
| BssT1I | CCWWGG | 2 cut(s) | 362, 467 |
| Bst1107I | GTATAC | 1 cut(s) | 234 |
| Bst2BI | CACGAG | 2 cut(s) | 63, 524 |
| Bst2UI | CCWGG | 1 cut(s) | 495 |
| Bst4CI | ACNGT | 1 cut(s) | 99 |
| BstBAI | YACGTR | 1 cut(s) | 535 |
| BstDEI | CTNAG | 1 cut(s) | 159 |
| BstDSI | CCRYGG | 2 cut(s) | 362, 467 |
| BstF5I | GGATG | 4 cut(s) | 182, 216, 322, 331 |
| BstKTI | GATC | 1 cut(s) | 112 |
| BstMBI | GATC | 1 cut(s) | 109 |
| BstNI | CCWGG | 1 cut(s) | 495 |
| BstSCI | CCNGG | 1 cut(s) | 493 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstSNI | TACGTA | 1 cut(s) | 535 |
| BstV1I | GCAGC | 5 cut(s) | 79, 142, 256, 363, 408 |
| BstX2I | RGATCY | 1 cut(s) | 109 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 211 |
| BstYI | RGATCY | 1 cut(s) | 109 |
| BstZ17I | GTATAC | 1 cut(s) | 234 |
| BsuRI | GGCC | 2 cut(s) | 389, 542 |
| BtgI | CCRYGG | 2 cut(s) | 362, 467 |
| BtsCI | GGATG | 4 cut(s) | 182, 216, 322, 331 |
| BtsIMutI | CAGTG | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 1 cut(s) | 387 |
| Csp6I | GTAC | 2 cut(s) | 183, 536 |
| CviAII | CATG | 5 cut(s) | 55, 363, 372, 468, 519 |
| CviQI | GTAC | 2 cut(s) | 183, 536 |
| DdeI | CTNAG | 1 cut(s) | 159 |
| DpnI | GATC | 1 cut(s) | 111 |
| DpnII | GATC | 1 cut(s) | 109 |
| Eco105I | TACGTA | 1 cut(s) | 535 |
| Eco130I | CCWWGG | 2 cut(s) | 362, 467 |
| Eco24I | GRGCYC | 1 cut(s) | 494 |
| Eco88I | CYCGRG | 1 cut(s) | 312 |
| EcoRII | CCWGG | 1 cut(s) | 493 |
| EcoT14I | CCWWGG | 2 cut(s) | 362, 467 |
| EcoT38I | GRGCYC | 1 cut(s) | 494 |
| ErhI | CCWWGG | 2 cut(s) | 362, 467 |
| FaeI | CATG | 5 cut(s) | 58, 366, 375, 471, 522 |
| FaqI | GGGAC | 1 cut(s) | 137 |
| FatI | CATG | 5 cut(s) | 54, 362, 371, 467, 518 |
| FblI | GTMKAC | 1 cut(s) | 233 |
| Fnu4HI | GCNGC | 5 cut(s) | 93, 131, 270, 377, 422 |
| FokI | GGATG | 4 cut(s) | 189, 223, 329, 338 |
| FriOI | GRGCYC | 1 cut(s) | 494 |
| Fsp4HI | GCNGC | 5 cut(s) | 93, 131, 270, 377, 422 |
| FspBI | CTAG | 3 cut(s) | 207, 354, 500 |
| GluI | GCNGC | 5 cut(s) | 93, 131, 270, 377, 422 |
| GsuI | CTGGAG | 1 cut(s) | 401 |
| HaeIII | GGCC | 2 cut(s) | 389, 542 |
| Hin1II | CATG | 5 cut(s) | 58, 366, 375, 471, 522 |
| HphI | GGTGA | 2 cut(s) | 251, 396 |
| Hpy166II | GTNNAC | 3 cut(s) | 102, 183, 234 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 314 |
| Hpy8I | GTNNAC | 3 cut(s) | 102, 183, 234 |
| HpyAV | CCTTC | 7 cut(s) | 19, 206, 220, 346, 360, 361, 411 |
| HpyCH4III | ACNGT | 1 cut(s) | 99 |
| HpyCH4IV | ACGT | 1 cut(s) | 534 |
| HpyCH4V | TGCA | 2 cut(s) | 95, 272 |
| HpyF3I | CTNAG | 1 cut(s) | 159 |
| HpySE526I | ACGT | 1 cut(s) | 534 |
| Hsp92II | CATG | 5 cut(s) | 58, 366, 375, 471, 522 |
| Kzo9I | GATC | 1 cut(s) | 109 |
| LmnI | GCTCC | 1 cut(s) | 334 |
| LpnPI | CCDG | 7 cut(s) | 90, 222, 365, 480, 497, 507, 524 |
| Lsp1109I | GCAGC | 5 cut(s) | 79, 142, 256, 363, 408 |
| LweI | GCATC | 2 cut(s) | 316, 515 |
| MaeI | CTAG | 3 cut(s) | 207, 354, 500 |
| MaeII | ACGT | 1 cut(s) | 534 |
| MaeIII | GTNAC | 1 cut(s) | 243 |
| MalI | GATC | 1 cut(s) | 111 |
| MboI | GATC | 1 cut(s) | 109 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MflI | RGATCY | 1 cut(s) | 109 |
| MhlI | GDGCHC | 1 cut(s) | 494 |
| MnlI | CCTC | 4 cut(s) | 342, 378, 417, 520 |
| MseI | TTAA | 2 cut(s) | 42, 305 |
| MslI | CAYNNNNRTG | 1 cut(s) | 209 |
| MspR9I | CCNGG | 1 cut(s) | 495 |
| MvaI | CCWGG | 1 cut(s) | 495 |
| NcoI | CCATGG | 2 cut(s) | 362, 467 |
| NdeII | GATC | 1 cut(s) | 109 |
| NlaIII | CATG | 5 cut(s) | 58, 366, 375, 471, 522 |
| NlaIV | GGNNCC | 1 cut(s) | 111 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 531 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 468 |
| PkrI | GCNGC | 5 cut(s) | 94, 132, 271, 378, 423 |
| Ppu21I | YACGTR | 1 cut(s) | 535 |
| Psp6I | CCWGG | 1 cut(s) | 493 |
| PspGI | CCWGG | 1 cut(s) | 493 |
| PspN4I | GGNNCC | 1 cut(s) | 111 |
| PspPI | GGNCC | 1 cut(s) | 387 |
| PstI | CTGCAG | 1 cut(s) | 274 |
| PsuI | RGATCY | 1 cut(s) | 109 |
| RsaI | GTAC | 2 cut(s) | 184, 537 |
| RsaNI | GTAC | 2 cut(s) | 183, 536 |
| RseI | CAYNNNNRTG | 1 cut(s) | 209 |
| SaqAI | TTAA | 2 cut(s) | 42, 305 |
| SatI | GCNGC | 5 cut(s) | 93, 131, 270, 377, 422 |
| Sau3AI | GATC | 1 cut(s) | 109 |
| Sau96I | GGNCC | 1 cut(s) | 387 |
| ScrFI | CCNGG | 1 cut(s) | 495 |
| SduI | GDGCHC | 1 cut(s) | 494 |
| SfaNI | GCATC | 2 cut(s) | 316, 515 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 209 |
| SmlI | CTYRAG | 1 cut(s) | 264 |
| SmoI | CTYRAG | 1 cut(s) | 264 |
| SnaBI | TACGTA | 1 cut(s) | 535 |
| SsiI | CCGC | 1 cut(s) | 454 |
| SspMI | CTAG | 3 cut(s) | 207, 354, 500 |
| StyD4I | CCNGG | 1 cut(s) | 493 |
| StyI | CCWWGG | 2 cut(s) | 362, 467 |
| TaaI | ACNGT | 1 cut(s) | 99 |
| TaiI | ACGT | 1 cut(s) | 537 |
| TaqI | TCGA | 1 cut(s) | 488 |
| TatI | WGTACW | 1 cut(s) | 182 |
| Tru1I | TTAA | 2 cut(s) | 42, 305 |
| Tru9I | TTAA | 2 cut(s) | 42, 305 |
| TscAI | CASTG | 1 cut(s) | 109 |
| TseI | GCWGC | 5 cut(s) | 92, 130, 269, 376, 421 |
| TspDTI | ATGAA | 1 cut(s) | 239 |
| TspRI | CASTG | 1 cut(s) | 109 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 468 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 369 |
| XmiI | GTMKAC | 1 cut(s) | 233 |
| XspI | CTAG | 3 cut(s) | 207, 354, 500 |