ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 2 cut(s) | 54, 230 |
| AfaI | GTAC | 1 cut(s) | 384 |
| AluBI | AGCT | 2 cut(s) | 314, 368 |
| AluI | AGCT | 2 cut(s) | 314, 368 |
| Alw26I | GTCTC | 3 cut(s) | 112, 134, 143 |
| AsuC2I | CCSGG | 1 cut(s) | 258 |
| BciVI | GTATCC | 1 cut(s) | 64 |
| BcnI | CCSGG | 1 cut(s) | 258 |
| BcoDI | GTCTC | 3 cut(s) | 112, 134, 143 |
| BfaI | CTAG | 2 cut(s) | 137, 336 |
| BfuI | GTATCC | 1 cut(s) | 64 |
| Bme1390I | CCNGG | 1 cut(s) | 258 |
| BmrFI | CCNGG | 1 cut(s) | 258 |
| BmsI | GCATC | 1 cut(s) | 243 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 92, 124, 386 |
| BpmI | CTGGAG | 2 cut(s) | 33, 348 |
| BpuMI | CCSGG | 1 cut(s) | 258 |
| BsaI | GGTCTC | 2 cut(s) | 134, 143 |
| BsaJI | CCNNGG | 1 cut(s) | 390 |
| Bse1I | ACTGG | 1 cut(s) | 50 |
| BseDI | CCNNGG | 1 cut(s) | 390 |
| BseNI | ACTGG | 1 cut(s) | 50 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BsmAI | GTCTC | 3 cut(s) | 112, 134, 143 |
| Bso31I | GGTCTC | 2 cut(s) | 134, 143 |
| BspTNI | GGTCTC | 2 cut(s) | 134, 143 |
| BsrI | ACTGG | 1 cut(s) | 50 |
| BssECI | CCNNGG | 1 cut(s) | 390 |
| BssT1I | CCWWGG | 1 cut(s) | 390 |
| BstDEI | CTNAG | 1 cut(s) | 180 |
| BstMAI | GTCTC | 3 cut(s) | 112, 134, 143 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 320 |
| BstSCI | CCNGG | 1 cut(s) | 256 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 298 |
| BsuI | GTATCC | 1 cut(s) | 64 |
| Csp6I | GTAC | 1 cut(s) | 383 |
| CviAII | CATG | 3 cut(s) | 59, 173, 275 |
| CviJI | RGCY | 6 cut(s) | 86, 290, 302, 314, 361, 368 |
| CviKI_1 | RGCY | 6 cut(s) | 86, 290, 302, 314, 361, 368 |
| CviQI | GTAC | 1 cut(s) | 383 |
| DdeI | CTNAG | 1 cut(s) | 180 |
| Eco130I | CCWWGG | 1 cut(s) | 390 |
| Eco31I | GGTCTC | 2 cut(s) | 134, 143 |
| Eco57I | CTGAAG | 2 cut(s) | 54, 230 |
| EcoT14I | CCWWGG | 1 cut(s) | 390 |
| ErhI | CCWWGG | 1 cut(s) | 390 |
| FaeI | CATG | 3 cut(s) | 62, 176, 278 |
| FaiI | YATR | 9 cut(s) | 18, 45, 60, 174, 201, 225, 276, 306, 356 |
| FatI | CATG | 3 cut(s) | 58, 172, 274 |
| FspBI | CTAG | 2 cut(s) | 137, 336 |
| GsuI | CTGGAG | 2 cut(s) | 33, 348 |
| HapII | CCGG | 1 cut(s) | 257 |
| Hin1II | CATG | 3 cut(s) | 62, 176, 278 |
| HinfI | GANTC | 2 cut(s) | 155, 189 |
| HpaII | CCGG | 1 cut(s) | 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 399 |
| Hpy188III | TCNNGA | 1 cut(s) | 72 |
| Hpy8I | GTNNAC | 1 cut(s) | 399 |
| HpyAV | CCTTC | 1 cut(s) | 217 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 320 |
| HpyF3I | CTNAG | 1 cut(s) | 180 |
| Hsp92II | CATG | 3 cut(s) | 62, 176, 278 |
| LmnI | GCTCC | 1 cut(s) | 52 |
| LpnPI | CCDG | 6 cut(s) | 57, 62, 63, 78, 270, 378 |
| LweI | GCATC | 1 cut(s) | 243 |
| MaeI | CTAG | 2 cut(s) | 137, 336 |
| MaeIII | GTNAC | 1 cut(s) | 139 |
| MboII | GAAGA | 4 cut(s) | 60, 236, 321, 324 |
| MlyI | GAGTC | 1 cut(s) | 198 |
| MnlI | CCTC | 5 cut(s) | 76, 90, 94, 119, 372 |
| MspI | CCGG | 1 cut(s) | 257 |
| MspR9I | CCNGG | 1 cut(s) | 258 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 320 |
| NciI | CCSGG | 1 cut(s) | 258 |
| NlaIII | CATG | 3 cut(s) | 62, 176, 278 |
| PfeI | GAWTC | 1 cut(s) | 155 |
| PleI | GAGTC | 1 cut(s) | 197 |
| PpsI | GAGTC | 1 cut(s) | 197 |
| RsaI | GTAC | 1 cut(s) | 384 |
| RsaNI | GTAC | 1 cut(s) | 383 |
| SchI | GAGTC | 1 cut(s) | 198 |
| ScrFI | CCNGG | 1 cut(s) | 258 |
| SetI | ASST | 9 cut(s) | 13, 37, 81, 130, 146, 239, 316, 370, 404 |
| SfaNI | GCATC | 1 cut(s) | 243 |
| SspMI | CTAG | 2 cut(s) | 137, 336 |
| StyD4I | CCNGG | 1 cut(s) | 256 |
| StyI | CCWWGG | 1 cut(s) | 390 |
| TaqII | GACCGA | 1 cut(s) | 167 |
| TatI | WGTACW | 1 cut(s) | 382 |
| TfiI | GAWTC | 1 cut(s) | 155 |
| TspDTI | ATGAA | 3 cut(s) | 161, 199, 230 |
| XspI | CTAG | 2 cut(s) | 137, 336 |