Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 11, 154 |
| AciI | CCGC | 2 cut(s) | 58, 125 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AjnI | CCWGG | 1 cut(s) | 259 |
| ApeKI | GCWGC | 1 cut(s) | 203 |
| BbsI | GAAGAC | 2 cut(s) | 239, 306 |
| BbvI | GCAGC | 1 cut(s) | 190 |
| BccI | CCATC | 1 cut(s) | 332 |
| BciT130I | CCWGG | 1 cut(s) | 261 |
| BfaI | CTAG | 2 cut(s) | 117, 150 |
| BfuAI | ACCTGC | 2 cut(s) | 11, 154 |
| BisI | GCNGC | 1 cut(s) | 204 |
| BlsI | GCNGC | 1 cut(s) | 205 |
| Bme1390I | CCNGG | 1 cut(s) | 261 |
| BmrFI | CCNGG | 1 cut(s) | 261 |
| BmsI | GCATC | 1 cut(s) | 155 |
| BpiI | GAAGAC | 2 cut(s) | 239, 306 |
| Bpu10I | CCTNAGC | 1 cut(s) | 32 |
| Bse1I | ACTGG | 2 cut(s) | 191, 314 |
| BseBI | CCWGG | 1 cut(s) | 261 |
| BseMII | CTCAG | 2 cut(s) | 23, 105 |
| BseNI | ACTGG | 2 cut(s) | 191, 314 |
| BseXI | GCAGC | 1 cut(s) | 190 |
| BspACI | CCGC | 2 cut(s) | 58, 125 |
| BspCNI | CTCAG | 2 cut(s) | 24, 104 |
| BspMI | ACCTGC | 2 cut(s) | 11, 154 |
| BsrI | ACTGG | 2 cut(s) | 191, 314 |
| Bst2UI | CCWGG | 1 cut(s) | 261 |
| BstC8I | GCNNGC | 2 cut(s) | 279, 361 |
| BstDEI | CTNAG | 2 cut(s) | 32, 91 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 64, 122 |
| BstNI | CCWGG | 1 cut(s) | 261 |
| BstSCI | CCNGG | 1 cut(s) | 259 |
| BstV1I | GCAGC | 1 cut(s) | 190 |
| BstV2I | GAAGAC | 2 cut(s) | 239, 306 |
| BtsIMutI | CAGTG | 1 cut(s) | 307 |
| BveI | ACCTGC | 2 cut(s) | 11, 154 |
| Cac8I | GCNNGC | 2 cut(s) | 279, 361 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviAII | CATG | 2 cut(s) | 110, 250 |
| CviJI | RGCY | 4 cut(s) | 116, 203, 277, 359 |
| CviKI_1 | RGCY | 4 cut(s) | 116, 203, 277, 359 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DdeI | CTNAG | 2 cut(s) | 32, 91 |
| EcoRII | CCWGG | 1 cut(s) | 259 |
| FaeI | CATG | 2 cut(s) | 113, 253 |
| FaiI | YATR | 4 cut(s) | 72, 111, 251, 283 |
| FatI | CATG | 2 cut(s) | 109, 249 |
| FauI | CCCGC | 1 cut(s) | 51 |
| Fnu4HI | GCNGC | 1 cut(s) | 204 |
| Fsp4HI | GCNGC | 1 cut(s) | 204 |
| FspBI | CTAG | 2 cut(s) | 117, 150 |
| GluI | GCNGC | 1 cut(s) | 204 |
| Hin1II | CATG | 2 cut(s) | 113, 253 |
| HinfI | GANTC | 1 cut(s) | 271 |
| Hpy188I | TCNGA | 2 cut(s) | 219, 289 |
| HpyCH4IV | ACGT | 1 cut(s) | 236 |
| HpyCH4V | TGCA | 2 cut(s) | 20, 146 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 64, 122 |
| HpyF3I | CTNAG | 2 cut(s) | 32, 91 |
| HpySE526I | ACGT | 1 cut(s) | 236 |
| Hsp92II | CATG | 2 cut(s) | 113, 253 |
| LpnPI | CCDG | 9 cut(s) | 6, 44, 149, 172, 184, 246, 263, 273, 295 |
| Lsp1109I | GCAGC | 1 cut(s) | 190 |
| LweI | GCATC | 1 cut(s) | 155 |
| MaeI | CTAG | 2 cut(s) | 117, 150 |
| MaeII | ACGT | 1 cut(s) | 236 |
| MboII | GAAGA | 3 cut(s) | 22, 244, 306 |
| MnlI | CCTC | 3 cut(s) | 114, 174, 225 |
| MseI | TTAA | 1 cut(s) | 366 |
| MspR9I | CCNGG | 1 cut(s) | 261 |
| MvaI | CCWGG | 1 cut(s) | 261 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 64, 122 |
| NlaIII | CATG | 2 cut(s) | 113, 253 |
| PfeI | GAWTC | 1 cut(s) | 271 |
| PkrI | GCNGC | 1 cut(s) | 205 |
| Psp6I | CCWGG | 1 cut(s) | 259 |
| PspGI | CCWGG | 1 cut(s) | 259 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| SaqAI | TTAA | 1 cut(s) | 366 |
| SatI | GCNGC | 1 cut(s) | 204 |
| ScrFI | CCNGG | 1 cut(s) | 261 |
| SetI | ASST | 4 cut(s) | 25, 168, 185, 239 |
| SfaNI | GCATC | 1 cut(s) | 155 |
| SsiI | CCGC | 2 cut(s) | 58, 125 |
| SspI | AATATT | 1 cut(s) | 211 |
| SspMI | CTAG | 2 cut(s) | 117, 150 |
| StyD4I | CCNGG | 1 cut(s) | 259 |
| TaiI | ACGT | 1 cut(s) | 239 |
| TfiI | GAWTC | 1 cut(s) | 271 |
| Tru1I | TTAA | 1 cut(s) | 366 |
| Tru9I | TTAA | 1 cut(s) | 366 |
| TscAI | CASTG | 1 cut(s) | 314 |
| TseI | GCWGC | 1 cut(s) | 203 |
| TspDTI | ATGAA | 2 cut(s) | 257, 359 |
| TspGWI | ACGGA | 1 cut(s) | 152 |
| TspRI | CASTG | 1 cut(s) | 314 |
| XspI | CTAG | 2 cut(s) | 117, 150 |