Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 65 - 133 | 3.5e-08 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 341 |
| AccI | GTMKAC | 1 cut(s) | 381 |
| AciI | CCGC | 2 cut(s) | 173, 341 |
| AclWI | GGATC | 1 cut(s) | 56 |
| AcsI | RAATTY | 1 cut(s) | 441 |
| AfaI | GTAC | 2 cut(s) | 95, 297 |
| AfeI | AGCGCT | 1 cut(s) | 113 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 176 |
| AgsI | TTSAA | 2 cut(s) | 329, 389 |
| AluBI | AGCT | 2 cut(s) | 278, 284 |
| AluI | AGCT | 2 cut(s) | 278, 284 |
| AlwI | GGATC | 1 cut(s) | 56 |
| Aor51HI | AGCGCT | 1 cut(s) | 113 |
| AoxI | GGCC | 1 cut(s) | 287 |
| ApeKI | GCWGC | 1 cut(s) | 275 |
| ApoI | RAATTY | 1 cut(s) | 441 |
| AseI | ATTAAT | 1 cut(s) | 192 |
| AspLEI | GCGC | 1 cut(s) | 114 |
| AspS9I | GGNCC | 2 cut(s) | 12, 288 |
| AsuHPI | GGTGA | 1 cut(s) | 300 |
| AvaII | GGWCC | 1 cut(s) | 12 |
| BbvI | GCAGC | 1 cut(s) | 287 |
| BccI | CCATC | 3 cut(s) | 79, 194, 215 |
| BfaI | CTAG | 4 cut(s) | 129, 249, 285, 417 |
| BfmI | CTRYAG | 1 cut(s) | 279 |
| BfoI | RGCGCY | 1 cut(s) | 115 |
| BisI | GCNGC | 1 cut(s) | 276 |
| BlsI | GCNGC | 1 cut(s) | 277 |
| BmcAI | AGTACT | 1 cut(s) | 95 |
| Bme18I | GGWCC | 1 cut(s) | 12 |
| BmgT120I | GGNCC | 2 cut(s) | 12, 288 |
| BmiI | GGNNCC | 1 cut(s) | 14 |
| BpmI | CTGGAG | 1 cut(s) | 40 |
| BsaJI | CCNNGG | 1 cut(s) | 364 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 41, 71 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 176 |
| BseDI | CCNNGG | 1 cut(s) | 364 |
| BseGI | GGATG | 2 cut(s) | 90, 226 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BseMII | CTCAG | 1 cut(s) | 426 |
| BseXI | GCAGC | 1 cut(s) | 287 |
| BshFI | GGCC | 1 cut(s) | 289 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BsnI | GGCC | 1 cut(s) | 289 |
| Bsp1407I | TGTACA | 1 cut(s) | 295 |
| Bsp143I | GATC | 1 cut(s) | 61 |
| BspACI | CCGC | 2 cut(s) | 173, 341 |
| BspANI | GGCC | 1 cut(s) | 289 |
| BspCNI | CTCAG | 1 cut(s) | 427 |
| BspLI | GGNNCC | 1 cut(s) | 14 |
| BspPI | GGATC | 1 cut(s) | 56 |
| BsrBI | CCGCTC | 1 cut(s) | 341 |
| BsrGI | TGTACA | 1 cut(s) | 295 |
| BssECI | CCNNGG | 1 cut(s) | 364 |
| BssMI | GATC | 1 cut(s) | 61 |
| BssT1I | CCWWGG | 1 cut(s) | 364 |
| Bst4CI | ACNGT | 1 cut(s) | 147 |
| BstAUI | TGTACA | 1 cut(s) | 295 |
| BstDEI | CTNAG | 1 cut(s) | 435 |
| BstF5I | GGATG | 2 cut(s) | 90, 226 |
| BstH2I | RGCGCY | 1 cut(s) | 115 |
| BstHHI | GCGC | 1 cut(s) | 114 |
| BstKTI | GATC | 1 cut(s) | 64 |
| BstMBI | GATC | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 281, 338 |
| BstNSI | RCATGY | 2 cut(s) | 302, 336 |
| BstSFI | CTRYAG | 1 cut(s) | 279 |
| BstV1I | GCAGC | 1 cut(s) | 287 |
| BsuRI | GGCC | 1 cut(s) | 289 |
| BtsCI | GGATG | 2 cut(s) | 90, 226 |
| BtsI | GCAGTG | 1 cut(s) | 60 |
| BtsIMutI | CAGTG | 1 cut(s) | 60 |
| CfoI | GCGC | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 2 cut(s) | 12, 288 |
| Csp6I | GTAC | 2 cut(s) | 94, 296 |
| CviAII | CATG | 2 cut(s) | 299, 333 |
| CviJI | RGCY | 4 cut(s) | 248, 278, 284, 289 |
| CviKI_1 | RGCY | 4 cut(s) | 248, 278, 284, 289 |
| CviQI | GTAC | 2 cut(s) | 94, 296 |
| DdeI | CTNAG | 1 cut(s) | 435 |
| DpnI | GATC | 1 cut(s) | 63 |
| DpnII | GATC | 1 cut(s) | 61 |
| Eco130I | CCWWGG | 1 cut(s) | 364 |
| Eco47I | GGWCC | 1 cut(s) | 12 |
| Eco47III | AGCGCT | 1 cut(s) | 113 |
| EcoRI | GAATTC | 1 cut(s) | 441 |
| EcoT14I | CCWWGG | 1 cut(s) | 364 |
| ErhI | CCWWGG | 1 cut(s) | 364 |
| FaeI | CATG | 2 cut(s) | 302, 336 |
| FaiI | YATR | 5 cut(s) | 281, 300, 320, 334, 425 |
| FatI | CATG | 2 cut(s) | 298, 332 |
| FauI | CCCGC | 1 cut(s) | 334 |
| FblI | GTMKAC | 1 cut(s) | 381 |
| Fnu4HI | GCNGC | 1 cut(s) | 276 |
| FokI | GGATG | 2 cut(s) | 97, 233 |
| Fsp4HI | GCNGC | 1 cut(s) | 276 |
| FspBI | CTAG | 4 cut(s) | 129, 249, 285, 417 |
| GlaI | GCGC | 1 cut(s) | 113 |
| GluI | GCNGC | 1 cut(s) | 276 |
| GsuI | CTGGAG | 1 cut(s) | 40 |
| HaeII | RGCGCY | 1 cut(s) | 115 |
| HaeIII | GGCC | 1 cut(s) | 289 |
| HhaI | GCGC | 1 cut(s) | 114 |
| Hin1II | CATG | 2 cut(s) | 302, 336 |
| Hin6I | GCGC | 1 cut(s) | 112 |
| HinP1I | GCGC | 1 cut(s) | 112 |
| HinfI | GANTC | 2 cut(s) | 270, 395 |
| HphI | GGTGA | 1 cut(s) | 300 |
| Hpy166II | GTNNAC | 4 cut(s) | 12, 125, 170, 382 |
| Hpy188I | TCNGA | 2 cut(s) | 376, 436 |
| Hpy188III | TCNNGA | 1 cut(s) | 19 |
| Hpy8I | GTNNAC | 4 cut(s) | 12, 125, 170, 382 |
| HpyAV | CCTTC | 1 cut(s) | 254 |
| HpyCH4III | ACNGT | 1 cut(s) | 147 |
| HpyCH4IV | ACGT | 1 cut(s) | 378 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 281, 338 |
| HpyF3I | CTNAG | 1 cut(s) | 435 |
| HpySE526I | ACGT | 1 cut(s) | 378 |
| Hsp92II | CATG | 2 cut(s) | 302, 336 |
| HspAI | GCGC | 1 cut(s) | 112 |
| Kzo9I | GATC | 1 cut(s) | 61 |
| LpnPI | CCDG | 4 cut(s) | 4, 28, 32, 161 |
| Lsp1109I | GCAGC | 1 cut(s) | 287 |
| MaeI | CTAG | 4 cut(s) | 129, 249, 285, 417 |
| MaeII | ACGT | 1 cut(s) | 378 |
| MalI | GATC | 1 cut(s) | 63 |
| MbiI | CCGCTC | 1 cut(s) | 341 |
| MboI | GATC | 1 cut(s) | 61 |
| MluCI | AATT | 2 cut(s) | 189, 441 |
| MlyI | GAGTC | 2 cut(s) | 279, 389 |
| MmeI | TCCRAC | 1 cut(s) | 354 |
| MnlI | CCTC | 4 cut(s) | 21, 26, 43, 194 |
| MseI | TTAA | 4 cut(s) | 192, 405, 452, 463 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 281, 338 |
| NdeII | GATC | 1 cut(s) | 61 |
| NlaIII | CATG | 2 cut(s) | 302, 336 |
| NlaIV | GGNNCC | 1 cut(s) | 14 |
| NspI | RCATGY | 2 cut(s) | 302, 336 |
| PkrI | GCNGC | 1 cut(s) | 277 |
| PleI | GAGTC | 2 cut(s) | 278, 389 |
| PpsI | GAGTC | 2 cut(s) | 278, 389 |
| PshBI | ATTAAT | 1 cut(s) | 192 |
| PspN4I | GGNNCC | 1 cut(s) | 14 |
| PspPI | GGNCC | 2 cut(s) | 12, 288 |
| RsaI | GTAC | 2 cut(s) | 95, 297 |
| RsaNI | GTAC | 2 cut(s) | 94, 296 |
| SaqAI | TTAA | 4 cut(s) | 192, 405, 452, 463 |
| SatI | GCNGC | 1 cut(s) | 276 |
| Sau3AI | GATC | 1 cut(s) | 61 |
| Sau96I | GGNCC | 2 cut(s) | 12, 288 |
| ScaI | AGTACT | 1 cut(s) | 95 |
| SchI | GAGTC | 2 cut(s) | 279, 389 |
| SetI | ASST | 7 cut(s) | 39, 130, 265, 280, 286, 370, 381 |
| SfcI | CTRYAG | 1 cut(s) | 279 |
| SinI | GGWCC | 1 cut(s) | 12 |
| Sse9I | AATT | 2 cut(s) | 189, 441 |
| SsiI | CCGC | 2 cut(s) | 173, 341 |
| SspI | AATATT | 1 cut(s) | 196 |
| SspMI | CTAG | 4 cut(s) | 129, 249, 285, 417 |
| StyI | CCWWGG | 1 cut(s) | 364 |
| TaaI | ACNGT | 1 cut(s) | 147 |
| TaiI | ACGT | 1 cut(s) | 381 |
| TasI | AATT | 2 cut(s) | 189, 441 |
| TatI | WGTACW | 2 cut(s) | 93, 295 |
| Tru1I | TTAA | 4 cut(s) | 192, 405, 452, 463 |
| Tru9I | TTAA | 4 cut(s) | 192, 405, 452, 463 |
| TscAI | CASTG | 1 cut(s) | 60 |
| TseI | GCWGC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 2 cut(s) | 273, 440 |
| TspRI | CASTG | 1 cut(s) | 60 |
| VpaK11BI | GGWCC | 1 cut(s) | 12 |
| VspI | ATTAAT | 1 cut(s) | 192 |
| XapI | RAATTY | 1 cut(s) | 441 |
| XceI | RCATGY | 2 cut(s) | 302, 336 |
| XmiI | GTMKAC | 1 cut(s) | 381 |
| XspI | CTAG | 4 cut(s) | 129, 249, 285, 417 |
| ZrmI | AGTACT | 1 cut(s) | 95 |