Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 209 |
| AciI | CCGC | 1 cut(s) | 184 |
| AclWI | GGATC | 1 cut(s) | 337 |
| AfaI | GTAC | 1 cut(s) | 170 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 343 |
| AflII | CTTAAG | 1 cut(s) | 352 |
| AgsI | TTSAA | 1 cut(s) | 25 |
| AluBI | AGCT | 3 cut(s) | 80, 374, 381 |
| AluI | AGCT | 3 cut(s) | 80, 374, 381 |
| Alw21I | GWGCWC | 1 cut(s) | 257 |
| AlwI | GGATC | 1 cut(s) | 337 |
| Aor13HI | TCCGGA | 1 cut(s) | 209 |
| AoxI | GGCC | 3 cut(s) | 63, 70, 281 |
| ApaI | GGGCCC | 1 cut(s) | 285 |
| ApeKI | GCWGC | 1 cut(s) | 181 |
| AseI | ATTAAT | 1 cut(s) | 359 |
| AspLEI | GCGC | 1 cut(s) | 197 |
| AspS9I | GGNCC | 5 cut(s) | 63, 70, 207, 281, 282 |
| AsuHPI | GGTGA | 2 cut(s) | 100, 130 |
| AvaII | GGWCC | 1 cut(s) | 207 |
| BaeGI | GKGCMC | 1 cut(s) | 285 |
| BanII | GRGCYC | 1 cut(s) | 285 |
| BbsI | GAAGAC | 1 cut(s) | 318 |
| Bbv12I | GWGCWC | 1 cut(s) | 257 |
| BbvI | GCAGC | 1 cut(s) | 168 |
| BccI | CCATC | 2 cut(s) | 293, 361 |
| BfaI | CTAG | 1 cut(s) | 234 |
| BfrI | CTTAAG | 1 cut(s) | 352 |
| BisI | GCNGC | 1 cut(s) | 182 |
| BlsI | GCNGC | 1 cut(s) | 183 |
| Bme18I | GGWCC | 1 cut(s) | 207 |
| BmgT120I | GGNCC | 5 cut(s) | 63, 70, 207, 281, 282 |
| BmiI | GGNNCC | 2 cut(s) | 64, 283 |
| BpiI | GAAGAC | 1 cut(s) | 318 |
| BpuEI | CTTGAG | 1 cut(s) | 241 |
| BsaBI | GATNNNNATC | 1 cut(s) | 272 |
| BsaJI | CCNNGG | 1 cut(s) | 66 |
| BsaWI | WCCGGW | 1 cut(s) | 209 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 343 |
| Bse8I | GATNNNNATC | 1 cut(s) | 272 |
| BseAI | TCCGGA | 1 cut(s) | 209 |
| BseDI | CCNNGG | 1 cut(s) | 66 |
| BseGI | GGATG | 1 cut(s) | 285 |
| BseJI | GATNNNNATC | 1 cut(s) | 272 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BseRI | GAGGAG | 1 cut(s) | 122 |
| BseSI | GKGCMC | 1 cut(s) | 285 |
| BseXI | GCAGC | 1 cut(s) | 168 |
| BshFI | GGCC | 3 cut(s) | 65, 72, 283 |
| BsiHKAI | GWGCWC | 1 cut(s) | 257 |
| BsiSI | CCGG | 1 cut(s) | 210 |
| BslFI | GGGAC | 1 cut(s) | 200 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BsmFI | GGGAC | 1 cut(s) | 200 |
| BsnI | GGCC | 3 cut(s) | 65, 72, 283 |
| Bsp120I | GGGCCC | 1 cut(s) | 281 |
| Bsp1286I | GDGCHC | 2 cut(s) | 257, 285 |
| Bsp13I | TCCGGA | 1 cut(s) | 209 |
| Bsp143I | GATC | 2 cut(s) | 10, 329 |
| BspACI | CCGC | 1 cut(s) | 184 |
| BspANI | GGCC | 3 cut(s) | 65, 72, 283 |
| BspEI | TCCGGA | 1 cut(s) | 209 |
| BspLI | GGNNCC | 2 cut(s) | 64, 283 |
| BspPI | GGATC | 1 cut(s) | 337 |
| BspTI | CTTAAG | 1 cut(s) | 352 |
| BssECI | CCNNGG | 1 cut(s) | 66 |
| BssMI | GATC | 2 cut(s) | 10, 329 |
| BssT1I | CCWWGG | 1 cut(s) | 66 |
| BstAFI | CTTAAG | 1 cut(s) | 352 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstF5I | GGATG | 1 cut(s) | 285 |
| BstHHI | GCGC | 1 cut(s) | 197 |
| BstKTI | GATC | 2 cut(s) | 13, 332 |
| BstMBI | GATC | 2 cut(s) | 10, 329 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 62 |
| BstNSI | RCATGY | 2 cut(s) | 20, 102 |
| BstSLI | GKGCMC | 1 cut(s) | 285 |
| BstV1I | GCAGC | 1 cut(s) | 168 |
| BstV2I | GAAGAC | 1 cut(s) | 318 |
| BsuRI | GGCC | 3 cut(s) | 65, 72, 283 |
| BtsCI | GGATG | 1 cut(s) | 285 |
| CfoI | GCGC | 1 cut(s) | 197 |
| Cfr13I | GGNCC | 5 cut(s) | 63, 70, 207, 281, 282 |
| Csp6I | GTAC | 1 cut(s) | 169 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 13, 48 |
| CviAII | CATG | 4 cut(s) | 17, 99, 103, 146 |
| CviJI | RGCY | 8 cut(s) | 65, 72, 80, 95, 283, 351, 374, 381 |
| CviKI_1 | RGCY | 8 cut(s) | 65, 72, 80, 95, 283, 351, 374, 381 |
| CviQI | GTAC | 1 cut(s) | 169 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| DpnI | GATC | 2 cut(s) | 12, 331 |
| DpnII | GATC | 2 cut(s) | 10, 329 |
| Eco130I | CCWWGG | 1 cut(s) | 66 |
| Eco24I | GRGCYC | 1 cut(s) | 285 |
| Eco47I | GGWCC | 1 cut(s) | 207 |
| EcoO109I | RGGNCCY | 2 cut(s) | 63, 281 |
| EcoT14I | CCWWGG | 1 cut(s) | 66 |
| EcoT22I | ATGCAT | 1 cut(s) | 104 |
| EcoT38I | GRGCYC | 1 cut(s) | 285 |
| ErhI | CCWWGG | 1 cut(s) | 66 |
| FaeI | CATG | 4 cut(s) | 20, 102, 106, 149 |
| FaiI | YATR | 5 cut(s) | 18, 100, 104, 147, 175 |
| FaqI | GGGAC | 1 cut(s) | 200 |
| FatI | CATG | 4 cut(s) | 16, 98, 102, 145 |
| FauI | CCCGC | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 1 cut(s) | 182 |
| FokI | GGATG | 1 cut(s) | 272 |
| FriOI | GRGCYC | 1 cut(s) | 285 |
| Fsp4HI | GCNGC | 1 cut(s) | 182 |
| FspBI | CTAG | 1 cut(s) | 234 |
| GlaI | GCGC | 1 cut(s) | 196 |
| GluI | GCNGC | 1 cut(s) | 182 |
| HaeIII | GGCC | 3 cut(s) | 65, 72, 283 |
| HapII | CCGG | 1 cut(s) | 210 |
| HhaI | GCGC | 1 cut(s) | 197 |
| Hin1II | CATG | 4 cut(s) | 20, 102, 106, 149 |
| Hin6I | GCGC | 1 cut(s) | 195 |
| HinP1I | GCGC | 1 cut(s) | 195 |
| HincII | GTYRAC | 1 cut(s) | 219 |
| HindII | GTYRAC | 1 cut(s) | 219 |
| HinfI | GANTC | 1 cut(s) | 36 |
| HpaII | CCGG | 1 cut(s) | 210 |
| HphI | GGTGA | 2 cut(s) | 100, 130 |
| Hpy166II | GTNNAC | 1 cut(s) | 219 |
| Hpy188I | TCNGA | 1 cut(s) | 278 |
| Hpy188III | TCNNGA | 2 cut(s) | 210, 265 |
| Hpy8I | GTNNAC | 1 cut(s) | 219 |
| HpyCH4IV | ACGT | 1 cut(s) | 203 |
| HpyCH4V | TGCA | 2 cut(s) | 16, 102 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 62 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| HpySE526I | ACGT | 1 cut(s) | 203 |
| Hsp92II | CATG | 4 cut(s) | 20, 102, 106, 149 |
| HspAI | GCGC | 1 cut(s) | 195 |
| Kpn2I | TCCGGA | 1 cut(s) | 209 |
| Kzo9I | GATC | 2 cut(s) | 10, 329 |
| LmnI | GCTCC | 1 cut(s) | 371 |
| LpnPI | CCDG | 1 cut(s) | 223 |
| Lsp1109I | GCAGC | 1 cut(s) | 168 |
| MaeI | CTAG | 1 cut(s) | 234 |
| MaeII | ACGT | 1 cut(s) | 203 |
| MaeIII | GTNAC | 1 cut(s) | 240 |
| MalI | GATC | 2 cut(s) | 12, 331 |
| MboI | GATC | 2 cut(s) | 10, 329 |
| MboII | GAAGA | 2 cut(s) | 40, 323 |
| MhlI | GDGCHC | 2 cut(s) | 257, 285 |
| MluCI | AATT | 1 cut(s) | 155 |
| MlyI | GAGTC | 1 cut(s) | 45 |
| MnlI | CCTC | 4 cut(s) | 84, 100, 272, 341 |
| Mph1103I | ATGCAT | 1 cut(s) | 104 |
| MroI | TCCGGA | 1 cut(s) | 209 |
| MseI | TTAA | 5 cut(s) | 42, 117, 227, 353, 359 |
| MspCI | CTTAAG | 1 cut(s) | 352 |
| MspI | CCGG | 1 cut(s) | 210 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 62 |
| NdeII | GATC | 2 cut(s) | 10, 329 |
| NlaIII | CATG | 4 cut(s) | 20, 102, 106, 149 |
| NlaIV | GGNNCC | 2 cut(s) | 64, 283 |
| NmeAIII | GCCGAG | 1 cut(s) | 32 |
| NsiI | ATGCAT | 1 cut(s) | 104 |
| NspI | RCATGY | 2 cut(s) | 20, 102 |
| PkrI | GCNGC | 1 cut(s) | 183 |
| PleI | GAGTC | 1 cut(s) | 44 |
| PpsI | GAGTC | 1 cut(s) | 44 |
| PshBI | ATTAAT | 1 cut(s) | 359 |
| PspN4I | GGNNCC | 2 cut(s) | 64, 283 |
| PspOMI | GGGCCC | 1 cut(s) | 281 |
| PspPI | GGNCC | 5 cut(s) | 63, 70, 207, 281, 282 |
| RsaI | GTAC | 1 cut(s) | 170 |
| RsaNI | GTAC | 1 cut(s) | 169 |
| SaqAI | TTAA | 5 cut(s) | 42, 117, 227, 353, 359 |
| SatI | GCNGC | 1 cut(s) | 182 |
| Sau3AI | GATC | 2 cut(s) | 10, 329 |
| Sau96I | GGNCC | 5 cut(s) | 63, 70, 207, 281, 282 |
| SchI | GAGTC | 1 cut(s) | 45 |
| SduI | GDGCHC | 2 cut(s) | 257, 285 |
| SetI | ASST | 6 cut(s) | 82, 90, 174, 206, 376, 383 |
| SinI | GGWCC | 1 cut(s) | 207 |
| SmlI | CTYRAG | 2 cut(s) | 256, 352 |
| SmoI | CTYRAG | 2 cut(s) | 256, 352 |
| Sse9I | AATT | 1 cut(s) | 155 |
| SsiI | CCGC | 1 cut(s) | 184 |
| SspMI | CTAG | 1 cut(s) | 234 |
| StyI | CCWWGG | 1 cut(s) | 66 |
| TaiI | ACGT | 1 cut(s) | 206 |
| TaqII | GACCGA | 1 cut(s) | 330 |
| TasI | AATT | 1 cut(s) | 155 |
| Tru1I | TTAA | 5 cut(s) | 42, 117, 227, 353, 359 |
| Tru9I | TTAA | 5 cut(s) | 42, 117, 227, 353, 359 |
| TseI | GCWGC | 1 cut(s) | 181 |
| TspDTI | ATGAA | 1 cut(s) | 162 |
| Vha464I | CTTAAG | 1 cut(s) | 352 |
| VpaK11BI | GGWCC | 1 cut(s) | 207 |
| VspI | ATTAAT | 1 cut(s) | 359 |
| XceI | RCATGY | 2 cut(s) | 20, 102 |
| XspI | CTAG | 1 cut(s) | 234 |
| Zsp2I | ATGCAT | 1 cut(s) | 104 |