Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 13 - 88 | 1.3e-12 | Reverse transcriptase-like |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 254 |
| AclWI | GGATC | 1 cut(s) | 150 |
| AgsI | TTSAA | 2 cut(s) | 71, 176 |
| AluBI | AGCT | 1 cut(s) | 64 |
| AluI | AGCT | 1 cut(s) | 64 |
| AlwI | GGATC | 1 cut(s) | 150 |
| AsuII | TTCGAA | 1 cut(s) | 312 |
| BccI | CCATC | 1 cut(s) | 228 |
| BfaI | CTAG | 2 cut(s) | 87, 260 |
| BfmI | CTRYAG | 1 cut(s) | 321 |
| BfuAI | ACCTGC | 1 cut(s) | 254 |
| Bpu14I | TTCGAA | 1 cut(s) | 312 |
| Bsp119I | TTCGAA | 1 cut(s) | 312 |
| Bsp143I | GATC | 1 cut(s) | 142 |
| BspMI | ACCTGC | 1 cut(s) | 254 |
| BspPI | GGATC | 1 cut(s) | 150 |
| BspT104I | TTCGAA | 1 cut(s) | 312 |
| BssMI | GATC | 1 cut(s) | 142 |
| Bst4CI | ACNGT | 1 cut(s) | 325 |
| BstBI | TTCGAA | 1 cut(s) | 312 |
| BstDEI | CTNAG | 1 cut(s) | 194 |
| BstKTI | GATC | 1 cut(s) | 145 |
| BstMBI | GATC | 1 cut(s) | 142 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 125 |
| BstSFI | CTRYAG | 1 cut(s) | 321 |
| BveI | ACCTGC | 1 cut(s) | 254 |
| CviAII | CATG | 2 cut(s) | 245, 295 |
| CviJI | RGCY | 3 cut(s) | 64, 119, 128 |
| CviKI_1 | RGCY | 3 cut(s) | 64, 119, 128 |
| DdeI | CTNAG | 1 cut(s) | 194 |
| DpnI | GATC | 1 cut(s) | 144 |
| DpnII | GATC | 1 cut(s) | 142 |
| FaeI | CATG | 2 cut(s) | 248, 298 |
| FaiI | YATR | 8 cut(s) | 26, 83, 225, 231, 246, 255, 296, 337 |
| FatI | CATG | 2 cut(s) | 244, 294 |
| FspBI | CTAG | 2 cut(s) | 87, 260 |
| Hin1II | CATG | 2 cut(s) | 248, 298 |
| HinfI | GANTC | 2 cut(s) | 165, 278 |
| Hpy188I | TCNGA | 1 cut(s) | 283 |
| Hpy188III | TCNNGA | 1 cut(s) | 146 |
| HpyAV | CCTTC | 1 cut(s) | 27 |
| HpyCH4III | ACNGT | 1 cut(s) | 325 |
| HpyCH4V | TGCA | 2 cut(s) | 24, 205 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 125 |
| HpyF3I | CTNAG | 1 cut(s) | 194 |
| Hsp92II | CATG | 2 cut(s) | 248, 298 |
| Kzo9I | GATC | 1 cut(s) | 142 |
| LmnI | GCTCC | 1 cut(s) | 61 |
| LpnPI | CCDG | 2 cut(s) | 39, 249 |
| MaeI | CTAG | 2 cut(s) | 87, 260 |
| MaeIII | GTNAC | 1 cut(s) | 130 |
| MalI | GATC | 1 cut(s) | 144 |
| MboI | GATC | 1 cut(s) | 142 |
| MboII | GAAGA | 1 cut(s) | 188 |
| MluCI | AATT | 2 cut(s) | 180, 330 |
| MmeI | TCCRAC | 1 cut(s) | 39 |
| MnlI | CCTC | 2 cut(s) | 7, 109 |
| MseI | TTAA | 4 cut(s) | 48, 98, 123, 183 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 125 |
| NdeII | GATC | 1 cut(s) | 142 |
| NlaIII | CATG | 2 cut(s) | 248, 298 |
| NmuCI | GTSAC | 1 cut(s) | 130 |
| NspV | TTCGAA | 1 cut(s) | 312 |
| PfeI | GAWTC | 2 cut(s) | 165, 278 |
| SaqAI | TTAA | 4 cut(s) | 48, 98, 123, 183 |
| Sau3AI | GATC | 1 cut(s) | 142 |
| SetI | ASST | 5 cut(s) | 18, 38, 66, 217, 268 |
| SfcI | CTRYAG | 1 cut(s) | 321 |
| SfuI | TTCGAA | 1 cut(s) | 312 |
| Sse9I | AATT | 2 cut(s) | 180, 330 |
| SspMI | CTAG | 2 cut(s) | 87, 260 |
| TaaI | ACNGT | 1 cut(s) | 325 |
| TaqI | TCGA | 1 cut(s) | 312 |
| TasI | AATT | 2 cut(s) | 180, 330 |
| TfiI | GAWTC | 2 cut(s) | 165, 278 |
| Tru1I | TTAA | 4 cut(s) | 48, 98, 123, 183 |
| Tru9I | TTAA | 4 cut(s) | 48, 98, 123, 183 |
| TseFI | GTSAC | 1 cut(s) | 130 |
| Tsp45I | GTSAC | 1 cut(s) | 130 |
| TspDTI | ATGAA | 1 cut(s) | 283 |
| XspI | CTAG | 2 cut(s) | 87, 260 |