Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MPP6 | PF10175 | 5 - 103 | 7.1e-10 | M-phase phosphoprotein 6 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 205 |
| AccII | CGCG | 1 cut(s) | 10 |
| AciI | CCGC | 1 cut(s) | 141 |
| AcsI | RAATTY | 1 cut(s) | 313 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 356, 710 |
| AgsI | TTSAA | 8 cut(s) | 40, 235, 256, 319, 370, 428, 578, 670 |
| AluBI | AGCT | 1 cut(s) | 16 |
| AluI | AGCT | 1 cut(s) | 16 |
| Alw26I | GTCTC | 1 cut(s) | 504 |
| ApeKI | GCWGC | 2 cut(s) | 200, 487 |
| ApoI | RAATTY | 1 cut(s) | 313 |
| AseI | ATTAAT | 1 cut(s) | 242 |
| AsuHPI | GGTGA | 4 cut(s) | 16, 197, 293, 339 |
| AsuNHI | GCTAGC | 1 cut(s) | 149 |
| BbvI | GCAGC | 2 cut(s) | 212, 499 |
| BccI | CCATC | 2 cut(s) | 294, 499 |
| BciVI | GTATCC | 3 cut(s) | 398, 459, 548 |
| BclI | TGATCA | 1 cut(s) | 741 |
| BcoDI | GTCTC | 1 cut(s) | 504 |
| BfaI | CTAG | 3 cut(s) | 21, 150, 750 |
| BfmI | CTRYAG | 1 cut(s) | 198 |
| BfuAI | ACCTGC | 1 cut(s) | 205 |
| BfuI | GTATCC | 3 cut(s) | 398, 459, 548 |
| BisI | GCNGC | 2 cut(s) | 201, 488 |
| BlsI | GCNGC | 2 cut(s) | 202, 489 |
| BmiI | GGNNCC | 1 cut(s) | 664 |
| BmsI | GCATC | 4 cut(s) | 272, 395, 545, 646 |
| BmtI | GCTAGC | 1 cut(s) | 153 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 356, 710 |
| BseGI | GGATG | 2 cut(s) | 222, 637 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 356, 710 |
| BseXI | GCAGC | 2 cut(s) | 212, 499 |
| Bsh1236I | CGCG | 1 cut(s) | 10 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 356, 710 |
| BsmAI | GTCTC | 1 cut(s) | 504 |
| Bsp143I | GATC | 2 cut(s) | 171, 741 |
| BspACI | CCGC | 1 cut(s) | 141 |
| BspFNI | CGCG | 1 cut(s) | 10 |
| BspLI | GGNNCC | 1 cut(s) | 664 |
| BspMAI | CTGCAG | 1 cut(s) | 202 |
| BspMI | ACCTGC | 1 cut(s) | 205 |
| BspOI | GCTAGC | 1 cut(s) | 153 |
| BssMI | GATC | 2 cut(s) | 171, 741 |
| Bst4CI | ACNGT | 4 cut(s) | 281, 423, 447, 527 |
| Bst6I | CTCTTC | 2 cut(s) | 714, 728 |
| BstC8I | GCNNGC | 1 cut(s) | 151 |
| BstDEI | CTNAG | 2 cut(s) | 158, 709 |
| BstEII | GGTNACC | 2 cut(s) | 185, 281 |
| BstF5I | GGATG | 2 cut(s) | 222, 637 |
| BstFNI | CGCG | 1 cut(s) | 10 |
| BstKTI | GATC | 2 cut(s) | 174, 744 |
| BstMAI | GTCTC | 1 cut(s) | 504 |
| BstMBI | GATC | 2 cut(s) | 171, 741 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 159 |
| BstPI | GGTNACC | 2 cut(s) | 185, 281 |
| BstSFI | CTRYAG | 1 cut(s) | 198 |
| BstUI | CGCG | 1 cut(s) | 10 |
| BstV1I | GCAGC | 2 cut(s) | 212, 499 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 459, 609 |
| BsuI | GTATCC | 3 cut(s) | 398, 459, 548 |
| BtsCI | GGATG | 2 cut(s) | 222, 637 |
| BveI | ACCTGC | 1 cut(s) | 205 |
| Cac8I | GCNNGC | 1 cut(s) | 151 |
| CseI | GACGC | 1 cut(s) | 16 |
| CviAII | CATG | 1 cut(s) | 46 |
| CviJI | RGCY | 4 cut(s) | 16, 153, 490, 663 |
| CviKI_1 | RGCY | 4 cut(s) | 16, 153, 490, 663 |
| DdeI | CTNAG | 2 cut(s) | 158, 709 |
| DpnI | GATC | 2 cut(s) | 173, 743 |
| DpnII | GATC | 2 cut(s) | 171, 741 |
| DraI | TTTAAA | 1 cut(s) | 226 |
| Eam1104I | CTCTTC | 2 cut(s) | 714, 728 |
| EarI | CTCTTC | 2 cut(s) | 714, 728 |
| Eco91I | GGTNACC | 2 cut(s) | 185, 281 |
| EcoO65I | GGTNACC | 2 cut(s) | 185, 281 |
| FaeI | CATG | 1 cut(s) | 49 |
| FaiI | YATR | 7 cut(s) | 47, 74, 352, 354, 411, 561, 746 |
| FatI | CATG | 1 cut(s) | 45 |
| FbaI | TGATCA | 1 cut(s) | 741 |
| Fnu4HI | GCNGC | 2 cut(s) | 201, 488 |
| FokI | GGATG | 2 cut(s) | 229, 624 |
| Fsp4HI | GCNGC | 2 cut(s) | 201, 488 |
| FspBI | CTAG | 3 cut(s) | 21, 150, 750 |
| GluI | GCNGC | 2 cut(s) | 201, 488 |
| HgaI | GACGC | 1 cut(s) | 16 |
| Hin1II | CATG | 1 cut(s) | 49 |
| HinfI | GANTC | 2 cut(s) | 379, 512 |
| HphI | GGTGA | 4 cut(s) | 16, 197, 293, 339 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 304, 732 |
| Hpy188III | TCNNGA | 2 cut(s) | 495, 670 |
| HpyAV | CCTTC | 6 cut(s) | 176, 376, 526, 620, 651, 676 |
| HpyCH4III | ACNGT | 4 cut(s) | 281, 423, 447, 527 |
| HpyCH4V | TGCA | 2 cut(s) | 49, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 159 |
| HpyF3I | CTNAG | 2 cut(s) | 158, 709 |
| Hsp92II | CATG | 1 cut(s) | 49 |
| Ksp22I | TGATCA | 1 cut(s) | 741 |
| Kzo9I | GATC | 2 cut(s) | 171, 741 |
| LmnI | GCTCC | 1 cut(s) | 668 |
| LpnPI | CCDG | 4 cut(s) | 210, 389, 679, 690 |
| Lsp1109I | GCAGC | 2 cut(s) | 212, 499 |
| LweI | GCATC | 4 cut(s) | 272, 395, 545, 646 |
| MaeI | CTAG | 3 cut(s) | 21, 150, 750 |
| MaeIII | GTNAC | 3 cut(s) | 4, 185, 281 |
| MalI | GATC | 2 cut(s) | 173, 743 |
| MboI | GATC | 2 cut(s) | 171, 741 |
| MboII | GAAGA | 7 cut(s) | 91, 104, 107, 440, 590, 731, 745 |
| MfeI | CAATTG | 1 cut(s) | 163 |
| MluCI | AATT | 9 cut(s) | 57, 105, 163, 204, 243, 251, 313, 337, 688 |
| MlyI | GAGTC | 1 cut(s) | 506 |
| MnlI | CCTC | 7 cut(s) | 24, 45, 61, 203, 653, 673, 729 |
| MseI | TTAA | 3 cut(s) | 225, 242, 726 |
| MspA1I | CMGCKG | 1 cut(s) | 143 |
| MunI | CAATTG | 1 cut(s) | 163 |
| MvnI | CGCG | 1 cut(s) | 10 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 159 |
| NdeII | GATC | 2 cut(s) | 171, 741 |
| NheI | GCTAGC | 1 cut(s) | 149 |
| NlaIII | CATG | 1 cut(s) | 49 |
| NlaIV | GGNNCC | 1 cut(s) | 664 |
| NmuCI | GTSAC | 3 cut(s) | 4, 185, 281 |
| PfeI | GAWTC | 1 cut(s) | 379 |
| PkrI | GCNGC | 2 cut(s) | 202, 489 |
| PleI | GAGTC | 1 cut(s) | 506 |
| PpsI | GAGTC | 1 cut(s) | 506 |
| PshBI | ATTAAT | 1 cut(s) | 242 |
| PspEI | GGTNACC | 2 cut(s) | 185, 281 |
| PspN4I | GGNNCC | 1 cut(s) | 664 |
| PstI | CTGCAG | 1 cut(s) | 202 |
| SaqAI | TTAA | 3 cut(s) | 225, 242, 726 |
| SatI | GCNGC | 2 cut(s) | 201, 488 |
| Sau3AI | GATC | 2 cut(s) | 171, 741 |
| SchI | GAGTC | 1 cut(s) | 506 |
| SfaNI | GCATC | 4 cut(s) | 272, 395, 545, 646 |
| SfcI | CTRYAG | 1 cut(s) | 198 |
| Sse9I | AATT | 9 cut(s) | 57, 105, 163, 204, 243, 251, 313, 337, 688 |
| SsiI | CCGC | 1 cut(s) | 141 |
| SspMI | CTAG | 3 cut(s) | 21, 150, 750 |
| TaaI | ACNGT | 4 cut(s) | 281, 423, 447, 527 |
| TaqI | TCGA | 3 cut(s) | 519, 532, 717 |
| TasI | AATT | 9 cut(s) | 57, 105, 163, 204, 243, 251, 313, 337, 688 |
| TfiI | GAWTC | 1 cut(s) | 379 |
| Tru1I | TTAA | 3 cut(s) | 225, 242, 726 |
| Tru9I | TTAA | 3 cut(s) | 225, 242, 726 |
| TseFI | GTSAC | 3 cut(s) | 4, 185, 281 |
| TseI | GCWGC | 2 cut(s) | 200, 487 |
| Tsp45I | GTSAC | 3 cut(s) | 4, 185, 281 |
| TspDTI | ATGAA | 5 cut(s) | 34, 92, 273, 333, 639 |
| VspI | ATTAAT | 1 cut(s) | 242 |
| XapI | RAATTY | 1 cut(s) | 313 |
| XspI | CTAG | 3 cut(s) | 21, 150, 750 |