Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 194 |
| AciI | CCGC | 3 cut(s) | 104, 190, 306 |
| AfaI | GTAC | 1 cut(s) | 224 |
| AgsI | TTSAA | 3 cut(s) | 63, 365, 403 |
| AluBI | AGCT | 1 cut(s) | 328 |
| AluI | AGCT | 1 cut(s) | 328 |
| Alw21I | GWGCWC | 2 cut(s) | 184, 417 |
| Alw26I | GTCTC | 1 cut(s) | 376 |
| AoxI | GGCC | 1 cut(s) | 279 |
| ApeKI | GCWGC | 1 cut(s) | 328 |
| AspS9I | GGNCC | 2 cut(s) | 187, 279 |
| AsuHPI | GGTGA | 1 cut(s) | 308 |
| AvaII | GGWCC | 1 cut(s) | 187 |
| Bbv12I | GWGCWC | 2 cut(s) | 184, 417 |
| BbvI | GCAGC | 1 cut(s) | 315 |
| BciVI | GTATCC | 2 cut(s) | 82, 233 |
| BclI | TGATCA | 1 cut(s) | 24 |
| BcoDI | GTCTC | 1 cut(s) | 376 |
| BfaI | CTAG | 1 cut(s) | 323 |
| BfuI | GTATCC | 2 cut(s) | 82, 233 |
| BisI | GCNGC | 1 cut(s) | 329 |
| BlsI | GCNGC | 1 cut(s) | 330 |
| Bme18I | GGWCC | 1 cut(s) | 187 |
| BmgT120I | GGNCC | 2 cut(s) | 187, 279 |
| BmsI | GCATC | 1 cut(s) | 300 |
| BpmI | CTGGAG | 1 cut(s) | 114 |
| Bpu10I | CCTNAGC | 1 cut(s) | 183 |
| Bse1I | ACTGG | 1 cut(s) | 97 |
| BseGI | GGATG | 1 cut(s) | 315 |
| BseMII | CTCAG | 1 cut(s) | 197 |
| BseNI | ACTGG | 1 cut(s) | 97 |
| BseXI | GCAGC | 1 cut(s) | 315 |
| BshFI | GGCC | 1 cut(s) | 281 |
| BsiHKAI | GWGCWC | 2 cut(s) | 184, 417 |
| BsmAI | GTCTC | 1 cut(s) | 376 |
| BsmI | GAATGC | 1 cut(s) | 159 |
| BsnI | GGCC | 1 cut(s) | 281 |
| Bsp1286I | GDGCHC | 2 cut(s) | 184, 417 |
| Bsp1407I | TGTACA | 1 cut(s) | 222 |
| Bsp143I | GATC | 2 cut(s) | 24, 82 |
| BspACI | CCGC | 3 cut(s) | 104, 190, 306 |
| BspANI | GGCC | 1 cut(s) | 281 |
| BspCNI | CTCAG | 1 cut(s) | 196 |
| BsrGI | TGTACA | 1 cut(s) | 222 |
| BsrI | ACTGG | 1 cut(s) | 97 |
| BssMI | GATC | 2 cut(s) | 24, 82 |
| Bst4CI | ACNGT | 2 cut(s) | 229, 302 |
| Bst6I | CTCTTC | 1 cut(s) | 379 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 386 |
| BstAUI | TGTACA | 1 cut(s) | 222 |
| BstC8I | GCNNGC | 1 cut(s) | 157 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstF5I | GGATG | 1 cut(s) | 315 |
| BstKTI | GATC | 2 cut(s) | 27, 85 |
| BstMAI | GTCTC | 1 cut(s) | 376 |
| BstMBI | GATC | 2 cut(s) | 24, 82 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 386 |
| BstNSI | RCATGY | 1 cut(s) | 159 |
| BstV1I | GCAGC | 1 cut(s) | 315 |
| BsuI | GTATCC | 2 cut(s) | 82, 233 |
| BsuRI | GGCC | 1 cut(s) | 281 |
| BtsCI | GGATG | 1 cut(s) | 315 |
| BtsIMutI | CAGTG | 1 cut(s) | 307 |
| Cac8I | GCNNGC | 1 cut(s) | 157 |
| Cfr13I | GGNCC | 2 cut(s) | 187, 279 |
| Csp6I | GTAC | 1 cut(s) | 223 |
| CviAII | CATG | 6 cut(s) | 115, 156, 176, 245, 381, 390 |
| CviJI | RGCY | 3 cut(s) | 71, 281, 328 |
| CviKI_1 | RGCY | 3 cut(s) | 71, 281, 328 |
| CviQI | GTAC | 1 cut(s) | 223 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| DpnI | GATC | 2 cut(s) | 26, 84 |
| DpnII | GATC | 2 cut(s) | 24, 82 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 194 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 194 |
| Eam1104I | CTCTTC | 1 cut(s) | 379 |
| EarI | CTCTTC | 1 cut(s) | 379 |
| Eco47I | GGWCC | 1 cut(s) | 187 |
| EcoT22I | ATGCAT | 1 cut(s) | 161 |
| FaeI | CATG | 6 cut(s) | 118, 159, 179, 248, 384, 393 |
| FaiI | YATR | 8 cut(s) | 45, 50, 116, 157, 177, 246, 382, 391 |
| FatI | CATG | 6 cut(s) | 114, 155, 175, 244, 380, 389 |
| FauI | CCCGC | 1 cut(s) | 299 |
| FbaI | TGATCA | 1 cut(s) | 24 |
| Fnu4HI | GCNGC | 1 cut(s) | 329 |
| FokI | GGATG | 1 cut(s) | 322 |
| Fsp4HI | GCNGC | 1 cut(s) | 329 |
| FspBI | CTAG | 1 cut(s) | 323 |
| GluI | GCNGC | 1 cut(s) | 329 |
| GsuI | CTGGAG | 1 cut(s) | 114 |
| HaeIII | GGCC | 1 cut(s) | 281 |
| Hin1II | CATG | 6 cut(s) | 118, 159, 179, 248, 384, 393 |
| HinfI | GANTC | 2 cut(s) | 361, 394 |
| HphI | GGTGA | 1 cut(s) | 308 |
| Hpy166II | GTNNAC | 2 cut(s) | 225, 250 |
| Hpy188I | TCNGA | 1 cut(s) | 57 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 185 |
| Hpy8I | GTNNAC | 2 cut(s) | 225, 250 |
| HpyCH4III | ACNGT | 2 cut(s) | 229, 302 |
| HpyCH4IV | ACGT | 2 cut(s) | 131, 342 |
| HpyCH4V | TGCA | 4 cut(s) | 118, 159, 380, 389 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 386 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| HpySE526I | ACGT | 2 cut(s) | 131, 342 |
| Hsp92II | CATG | 6 cut(s) | 118, 159, 179, 248, 384, 393 |
| Ksp22I | TGATCA | 1 cut(s) | 24 |
| Kzo9I | GATC | 2 cut(s) | 24, 82 |
| LpnPI | CCDG | 7 cut(s) | 71, 78, 104, 170, 184, 262, 279 |
| Lsp1109I | GCAGC | 1 cut(s) | 315 |
| LweI | GCATC | 1 cut(s) | 300 |
| MaeI | CTAG | 1 cut(s) | 323 |
| MaeII | ACGT | 2 cut(s) | 131, 342 |
| MaeIII | GTNAC | 1 cut(s) | 296 |
| MalI | GATC | 2 cut(s) | 26, 84 |
| MboI | GATC | 2 cut(s) | 24, 82 |
| MboII | GAAGA | 3 cut(s) | 4, 160, 366 |
| MhlI | GDGCHC | 2 cut(s) | 184, 417 |
| MluCI | AATT | 2 cut(s) | 78, 352 |
| MmeI | TCCRAC | 1 cut(s) | 363 |
| MnlI | CCTC | 2 cut(s) | 133, 351 |
| Mph1103I | ATGCAT | 1 cut(s) | 161 |
| MseI | TTAA | 2 cut(s) | 77, 167 |
| Mva1269I | GAATGC | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 386 |
| NdeII | GATC | 2 cut(s) | 24, 82 |
| NlaIII | CATG | 6 cut(s) | 118, 159, 179, 248, 384, 393 |
| NmuCI | GTSAC | 1 cut(s) | 296 |
| NsiI | ATGCAT | 1 cut(s) | 161 |
| NspI | RCATGY | 1 cut(s) | 159 |
| PaeI | GCATGC | 1 cut(s) | 159 |
| PctI | GAATGC | 1 cut(s) | 159 |
| PfeI | GAWTC | 2 cut(s) | 361, 394 |
| PkrI | GCNGC | 1 cut(s) | 330 |
| PspPI | GGNCC | 2 cut(s) | 187, 279 |
| RsaI | GTAC | 1 cut(s) | 224 |
| RsaNI | GTAC | 1 cut(s) | 223 |
| SaqAI | TTAA | 2 cut(s) | 77, 167 |
| SatI | GCNGC | 1 cut(s) | 329 |
| Sau3AI | GATC | 2 cut(s) | 24, 82 |
| Sau96I | GGNCC | 2 cut(s) | 187, 279 |
| SduI | GDGCHC | 2 cut(s) | 184, 417 |
| SetI | ASST | 6 cut(s) | 134, 144, 220, 298, 330, 345 |
| SfaNI | GCATC | 1 cut(s) | 300 |
| SinI | GGWCC | 1 cut(s) | 187 |
| SphI | GCATGC | 1 cut(s) | 159 |
| Sse9I | AATT | 2 cut(s) | 78, 352 |
| SsiI | CCGC | 3 cut(s) | 104, 190, 306 |
| SspMI | CTAG | 1 cut(s) | 323 |
| TaaI | ACNGT | 2 cut(s) | 229, 302 |
| TaiI | ACGT | 2 cut(s) | 134, 345 |
| TasI | AATT | 2 cut(s) | 78, 352 |
| TatI | WGTACW | 1 cut(s) | 222 |
| TfiI | GAWTC | 2 cut(s) | 361, 394 |
| Tru1I | TTAA | 2 cut(s) | 77, 167 |
| Tru9I | TTAA | 2 cut(s) | 77, 167 |
| TscAI | CASTG | 1 cut(s) | 307 |
| TseFI | GTSAC | 1 cut(s) | 296 |
| TseI | GCWGC | 1 cut(s) | 328 |
| Tsp45I | GTSAC | 1 cut(s) | 296 |
| TspDTI | ATGAA | 2 cut(s) | 103, 164 |
| TspRI | CASTG | 1 cut(s) | 307 |
| VpaK11BI | GGWCC | 1 cut(s) | 187 |
| XceI | RCATGY | 1 cut(s) | 159 |
| XspI | CTAG | 1 cut(s) | 323 |
| Zsp2I | ATGCAT | 1 cut(s) | 161 |