ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 102 |
| AcsI | RAATTY | 1 cut(s) | 42 |
| AcvI | CACGTG | 2 cut(s) | 57, 258 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 109, 258 |
| AflIII | ACRYGT | 1 cut(s) | 255 |
| AgsI | TTSAA | 1 cut(s) | 193 |
| AjnI | CCWGG | 1 cut(s) | 240 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 31, 63 |
| AluBI | AGCT | 2 cut(s) | 115, 286 |
| AluI | AGCT | 2 cut(s) | 115, 286 |
| Alw26I | GTCTC | 2 cut(s) | 177, 240 |
| Aor13HI | TCCGGA | 1 cut(s) | 102 |
| ApoI | RAATTY | 1 cut(s) | 42 |
| AsuHPI | GGTGA | 1 cut(s) | 227 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 185, 217 |
| BbrPI | CACGTG | 2 cut(s) | 57, 258 |
| BciT130I | CCWGG | 1 cut(s) | 242 |
| BcoDI | GTCTC | 2 cut(s) | 177, 240 |
| BfaI | CTAG | 3 cut(s) | 95, 231, 301 |
| Bme1390I | CCNGG | 1 cut(s) | 242 |
| BmrFI | CCNGG | 1 cut(s) | 242 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BsaAI | YACGTR | 2 cut(s) | 57, 258 |
| BsaJI | CCNNGG | 1 cut(s) | 241 |
| BsaWI | WCCGGW | 1 cut(s) | 102 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 109, 258 |
| BseAI | TCCGGA | 1 cut(s) | 102 |
| BseBI | CCWGG | 1 cut(s) | 242 |
| BseDI | CCNNGG | 1 cut(s) | 241 |
| BseGI | GGATG | 1 cut(s) | 163 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 109, 258 |
| BseMII | CTCAG | 1 cut(s) | 159 |
| BseRI | GAGGAG | 1 cut(s) | 277 |
| BsiSI | CCGG | 1 cut(s) | 103 |
| BslFI | GGGAC | 1 cut(s) | 59 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 109, 258 |
| BsmAI | GTCTC | 2 cut(s) | 177, 240 |
| BsmFI | GGGAC | 1 cut(s) | 59 |
| Bsp13I | TCCGGA | 1 cut(s) | 102 |
| BspCNI | CTCAG | 1 cut(s) | 160 |
| BspEI | TCCGGA | 1 cut(s) | 102 |
| BssECI | CCNNGG | 1 cut(s) | 241 |
| Bst2UI | CCWGG | 1 cut(s) | 242 |
| Bst4CI | ACNGT | 1 cut(s) | 215 |
| Bst6I | CTCTTC | 1 cut(s) | 78 |
| BstBAI | YACGTR | 2 cut(s) | 57, 258 |
| BstC8I | GCNNGC | 1 cut(s) | 228 |
| BstDEI | CTNAG | 3 cut(s) | 6, 133, 168 |
| BstF5I | GGATG | 1 cut(s) | 163 |
| BstMAI | GTCTC | 2 cut(s) | 177, 240 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstNI | CCWGG | 1 cut(s) | 242 |
| BstNSI | RCATGY | 1 cut(s) | 230 |
| BstSCI | CCNGG | 1 cut(s) | 240 |
| BtsCI | GGATG | 1 cut(s) | 163 |
| Cac8I | GCNNGC | 1 cut(s) | 228 |
| CseI | GACGC | 1 cut(s) | 61 |
| CviAII | CATG | 1 cut(s) | 227 |
| CviJI | RGCY | 6 cut(s) | 5, 52, 115, 137, 286, 300 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 52, 115, 137, 286, 300 |
| DdeI | CTNAG | 3 cut(s) | 6, 133, 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 78 |
| EarI | CTCTTC | 1 cut(s) | 78 |
| Eco72I | CACGTG | 2 cut(s) | 57, 258 |
| EcoRII | CCWGG | 1 cut(s) | 240 |
| EcoT22I | ATGCAT | 1 cut(s) | 228 |
| FaeI | CATG | 1 cut(s) | 230 |
| FaiI | YATR | 2 cut(s) | 110, 228 |
| FaqI | GGGAC | 1 cut(s) | 59 |
| FatI | CATG | 1 cut(s) | 226 |
| FokI | GGATG | 1 cut(s) | 150 |
| FspBI | CTAG | 3 cut(s) | 95, 231, 301 |
| HapII | CCGG | 1 cut(s) | 103 |
| HgaI | GACGC | 1 cut(s) | 61 |
| Hin1II | CATG | 1 cut(s) | 230 |
| HinfI | GANTC | 3 cut(s) | 23, 170, 248 |
| HpaII | CCGG | 1 cut(s) | 103 |
| HphI | GGTGA | 1 cut(s) | 227 |
| Hpy166II | GTNNAC | 2 cut(s) | 92, 238 |
| Hpy188I | TCNGA | 1 cut(s) | 28 |
| Hpy188III | TCNNGA | 2 cut(s) | 103, 167 |
| Hpy8I | GTNNAC | 2 cut(s) | 92, 238 |
| HpyAV | CCTTC | 1 cut(s) | 187 |
| HpyCH4III | ACNGT | 1 cut(s) | 215 |
| HpyCH4IV | ACGT | 2 cut(s) | 56, 257 |
| HpyCH4V | TGCA | 1 cut(s) | 226 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 3 cut(s) | 6, 133, 168 |
| HpySE526I | ACGT | 2 cut(s) | 56, 257 |
| Hsp92II | CATG | 1 cut(s) | 230 |
| Kpn2I | TCCGGA | 1 cut(s) | 102 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| LpnPI | CCDG | 5 cut(s) | 116, 128, 180, 227, 254 |
| LweI | GCATC | 1 cut(s) | 172 |
| MaeI | CTAG | 3 cut(s) | 95, 231, 301 |
| MaeII | ACGT | 2 cut(s) | 56, 257 |
| MboII | GAAGA | 1 cut(s) | 95 |
| MluCI | AATT | 1 cut(s) | 42 |
| MlyI | GAGTC | 2 cut(s) | 179, 242 |
| MmeI | TCCRAC | 1 cut(s) | 128 |
| MnlI | CCTC | 4 cut(s) | 79, 144, 153, 255 |
| Mph1103I | ATGCAT | 1 cut(s) | 228 |
| MroI | TCCGGA | 1 cut(s) | 102 |
| MseI | TTAA | 3 cut(s) | 120, 221, 269 |
| MslI | CAYNNNNRTG | 1 cut(s) | 231 |
| MspI | CCGG | 1 cut(s) | 103 |
| MspR9I | CCNGG | 1 cut(s) | 242 |
| MvaI | CCWGG | 1 cut(s) | 242 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NlaIII | CATG | 1 cut(s) | 230 |
| NsiI | ATGCAT | 1 cut(s) | 228 |
| NspI | RCATGY | 1 cut(s) | 230 |
| PaeI | GCATGC | 1 cut(s) | 230 |
| PfeI | GAWTC | 1 cut(s) | 23 |
| PleI | GAGTC | 2 cut(s) | 178, 242 |
| PmaCI | CACGTG | 2 cut(s) | 57, 258 |
| PmlI | CACGTG | 2 cut(s) | 57, 258 |
| PpsI | GAGTC | 2 cut(s) | 178, 242 |
| Ppu21I | YACGTR | 2 cut(s) | 57, 258 |
| Psp6I | CCWGG | 1 cut(s) | 240 |
| PspCI | CACGTG | 2 cut(s) | 57, 258 |
| PspGI | CCWGG | 1 cut(s) | 240 |
| RseI | CAYNNNNRTG | 1 cut(s) | 231 |
| SaqAI | TTAA | 3 cut(s) | 120, 221, 269 |
| SchI | GAGTC | 2 cut(s) | 179, 242 |
| ScrFI | CCNGG | 1 cut(s) | 242 |
| SetI | ASST | 7 cut(s) | 59, 100, 117, 155, 243, 260, 288 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 231 |
| SphI | GCATGC | 1 cut(s) | 230 |
| Sse9I | AATT | 1 cut(s) | 42 |
| SspMI | CTAG | 3 cut(s) | 95, 231, 301 |
| StyD4I | CCNGG | 1 cut(s) | 240 |
| TaaI | ACNGT | 1 cut(s) | 215 |
| TaiI | ACGT | 2 cut(s) | 59, 260 |
| TasI | AATT | 1 cut(s) | 42 |
| TfiI | GAWTC | 1 cut(s) | 23 |
| Tru1I | TTAA | 3 cut(s) | 120, 221, 269 |
| Tru9I | TTAA | 3 cut(s) | 120, 221, 269 |
| TspDTI | ATGAA | 2 cut(s) | 35, 287 |
| XapI | RAATTY | 1 cut(s) | 42 |
| XceI | RCATGY | 1 cut(s) | 230 |
| XspI | CTAG | 3 cut(s) | 95, 231, 301 |
| Zsp2I | ATGCAT | 1 cut(s) | 228 |