Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 115, 292 |
| AccII | CGCG | 1 cut(s) | 109 |
| AciI | CCGC | 3 cut(s) | 21, 107, 109 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 58, 110 |
| AjiI | CACGTC | 1 cut(s) | 267 |
| AluBI | AGCT | 3 cut(s) | 149, 212, 275 |
| AluI | AGCT | 3 cut(s) | 149, 212, 275 |
| Alw26I | GTCTC | 1 cut(s) | 257 |
| AoxI | GGCC | 2 cut(s) | 221, 258 |
| ApeKI | GCWGC | 1 cut(s) | 209 |
| AseI | ATTAAT | 2 cut(s) | 126, 249 |
| AsuHPI | GGTGA | 1 cut(s) | 190 |
| AxyI | CCTNAGG | 1 cut(s) | 57 |
| BaeGI | GKGCMC | 1 cut(s) | 200 |
| BbsI | GAAGAC | 1 cut(s) | 272 |
| BbvI | GCAGC | 1 cut(s) | 221 |
| BcoDI | GTCTC | 1 cut(s) | 257 |
| BfaI | CTAG | 1 cut(s) | 66 |
| BisI | GCNGC | 1 cut(s) | 210 |
| BlsI | GCNGC | 1 cut(s) | 211 |
| BmgBI | CACGTC | 1 cut(s) | 267 |
| BpiI | GAAGAC | 1 cut(s) | 272 |
| BsaJI | CCNNGG | 1 cut(s) | 107 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 58, 110 |
| Bse21I | CCTNAGG | 1 cut(s) | 57 |
| BseDI | CCNNGG | 1 cut(s) | 107 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 58, 110 |
| BseSI | GKGCMC | 1 cut(s) | 200 |
| BseXI | GCAGC | 1 cut(s) | 221 |
| BsgI | GTGCAG | 1 cut(s) | 289 |
| Bsh1236I | CGCG | 1 cut(s) | 109 |
| BshFI | GGCC | 2 cut(s) | 223, 260 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 58, 110 |
| BsmAI | GTCTC | 1 cut(s) | 257 |
| BsmBI | CGTCTC | 1 cut(s) | 257 |
| BsnI | GGCC | 2 cut(s) | 223, 260 |
| Bsp1286I | GDGCHC | 1 cut(s) | 200 |
| BspACI | CCGC | 3 cut(s) | 21, 107, 109 |
| BspANI | GGCC | 2 cut(s) | 223, 260 |
| BspFNI | CGCG | 1 cut(s) | 109 |
| BssECI | CCNNGG | 1 cut(s) | 107 |
| BssNAI | GTATAC | 1 cut(s) | 293 |
| Bst1107I | GTATAC | 1 cut(s) | 293 |
| Bst6I | CTCTTC | 1 cut(s) | 71 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 215 |
| BstC8I | GCNNGC | 2 cut(s) | 23, 234 |
| BstDEI | CTNAG | 1 cut(s) | 57 |
| BstDSI | CCRYGG | 1 cut(s) | 107 |
| BstFNI | CGCG | 1 cut(s) | 109 |
| BstMAI | GTCTC | 1 cut(s) | 257 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 146, 215, 229, 242 |
| BstNSI | RCATGY | 1 cut(s) | 236 |
| BstSLI | GKGCMC | 1 cut(s) | 200 |
| BstUI | CGCG | 1 cut(s) | 109 |
| BstV1I | GCAGC | 1 cut(s) | 221 |
| BstV2I | GAAGAC | 1 cut(s) | 272 |
| BstZ17I | GTATAC | 1 cut(s) | 293 |
| Bsu36I | CCTNAGG | 1 cut(s) | 57 |
| BsuRI | GGCC | 2 cut(s) | 223, 260 |
| BtgI | CCRYGG | 1 cut(s) | 107 |
| BtrI | CACGTC | 1 cut(s) | 267 |
| Cac8I | GCNNGC | 2 cut(s) | 23, 234 |
| Cfr42I | CCGCGG | 1 cut(s) | 110 |
| CviAII | CATG | 1 cut(s) | 233 |
| CviJI | RGCY | 6 cut(s) | 149, 212, 223, 245, 260, 275 |
| CviKI_1 | RGCY | 6 cut(s) | 149, 212, 223, 245, 260, 275 |
| DdeI | CTNAG | 1 cut(s) | 57 |
| Eam1104I | CTCTTC | 1 cut(s) | 71 |
| EarI | CTCTTC | 1 cut(s) | 71 |
| Eco147I | AGGCCT | 1 cut(s) | 223 |
| Eco81I | CCTNAGG | 1 cut(s) | 57 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| Esp3I | CGTCTC | 1 cut(s) | 257 |
| FaeI | CATG | 1 cut(s) | 236 |
| FaiI | YATR | 7 cut(s) | 6, 8, 142, 144, 234, 254, 293 |
| FatI | CATG | 1 cut(s) | 232 |
| FauI | CCCGC | 2 cut(s) | 14, 102 |
| FauNDI | CATATG | 1 cut(s) | 6 |
| FblI | GTMKAC | 2 cut(s) | 115, 292 |
| Fnu4HI | GCNGC | 1 cut(s) | 210 |
| Fsp4HI | GCNGC | 1 cut(s) | 210 |
| FspBI | CTAG | 1 cut(s) | 66 |
| GluI | GCNGC | 1 cut(s) | 210 |
| HaeIII | GGCC | 2 cut(s) | 223, 260 |
| Hin1II | CATG | 1 cut(s) | 236 |
| HphI | GGTGA | 1 cut(s) | 190 |
| Hpy166II | GTNNAC | 3 cut(s) | 104, 116, 293 |
| Hpy8I | GTNNAC | 3 cut(s) | 104, 116, 293 |
| HpyCH4IV | ACGT | 1 cut(s) | 266 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 209, 218, 232, 236, 270 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 146, 215, 229, 242 |
| HpyF3I | CTNAG | 1 cut(s) | 57 |
| HpySE526I | ACGT | 1 cut(s) | 266 |
| Hsp92II | CATG | 1 cut(s) | 236 |
| KspI | CCGCGG | 1 cut(s) | 110 |
| LpnPI | CCDG | 1 cut(s) | 261 |
| Lsp1109I | GCAGC | 1 cut(s) | 221 |
| MaeI | CTAG | 1 cut(s) | 66 |
| MaeII | ACGT | 1 cut(s) | 266 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MboII | GAAGA | 3 cut(s) | 85, 88, 272 |
| MhlI | GDGCHC | 1 cut(s) | 200 |
| MluCI | AATT | 1 cut(s) | 123 |
| MmeI | TCCRAC | 1 cut(s) | 12 |
| MnlI | CCTC | 5 cut(s) | 28, 63, 72, 130, 250 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 3 cut(s) | 86, 126, 249 |
| MslI | CAYNNNNRTG | 1 cut(s) | 173 |
| MspA1I | CMGCKG | 1 cut(s) | 109 |
| MvnI | CGCG | 1 cut(s) | 109 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 146, 215, 229, 242 |
| NdeI | CATATG | 1 cut(s) | 6 |
| NlaIII | CATG | 1 cut(s) | 236 |
| NmeAIII | GCCGAG | 2 cut(s) | 221, 286 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 236 |
| PaeI | GCATGC | 1 cut(s) | 236 |
| PceI | AGGCCT | 1 cut(s) | 223 |
| PkrI | GCNGC | 1 cut(s) | 211 |
| PshBI | ATTAAT | 2 cut(s) | 126, 249 |
| RseI | CAYNNNNRTG | 1 cut(s) | 173 |
| SacII | CCGCGG | 1 cut(s) | 110 |
| SaqAI | TTAA | 3 cut(s) | 86, 126, 249 |
| SatI | GCNGC | 1 cut(s) | 210 |
| SduI | GDGCHC | 1 cut(s) | 200 |
| SetI | ASST | 4 cut(s) | 151, 214, 269, 277 |
| Sfr303I | CCGCGG | 1 cut(s) | 110 |
| SgrBI | CCGCGG | 1 cut(s) | 110 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 173 |
| SphI | GCATGC | 1 cut(s) | 236 |
| Sse9I | AATT | 1 cut(s) | 123 |
| SseBI | AGGCCT | 1 cut(s) | 223 |
| SsiI | CCGC | 3 cut(s) | 21, 107, 109 |
| SspI | AATATT | 1 cut(s) | 130 |
| SspMI | CTAG | 1 cut(s) | 66 |
| StuI | AGGCCT | 1 cut(s) | 223 |
| TaiI | ACGT | 1 cut(s) | 269 |
| TasI | AATT | 1 cut(s) | 123 |
| Tru1I | TTAA | 3 cut(s) | 86, 126, 249 |
| Tru9I | TTAA | 3 cut(s) | 86, 126, 249 |
| TseI | GCWGC | 1 cut(s) | 209 |
| VspI | ATTAAT | 2 cut(s) | 126, 249 |
| XceI | RCATGY | 1 cut(s) | 236 |
| XmiI | GTMKAC | 2 cut(s) | 115, 292 |
| XspI | CTAG | 1 cut(s) | 66 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |