Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 10 |
| AciI | CCGC | 2 cut(s) | 127, 173 |
| AclWI | GGATC | 1 cut(s) | 364 |
| AgsI | TTSAA | 3 cut(s) | 31, 92, 204 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 184, 216 |
| AluBI | AGCT | 1 cut(s) | 400 |
| AluI | AGCT | 1 cut(s) | 400 |
| Alw26I | GTCTC | 1 cut(s) | 177 |
| AlwI | GGATC | 1 cut(s) | 364 |
| ApeKI | GCWGC | 2 cut(s) | 300, 397 |
| AseI | ATTAAT | 1 cut(s) | 63 |
| AsuHPI | GGTGA | 1 cut(s) | 119 |
| BbsI | GAAGAC | 1 cut(s) | 117 |
| BbvI | GCAGC | 1 cut(s) | 287 |
| BccI | CCATC | 1 cut(s) | 284 |
| BcoDI | GTCTC | 1 cut(s) | 177 |
| BfaI | CTAG | 4 cut(s) | 180, 225, 320, 377 |
| BisI | GCNGC | 3 cut(s) | 173, 301, 398 |
| BlsI | GCNGC | 3 cut(s) | 174, 302, 399 |
| BmsI | GCATC | 1 cut(s) | 274 |
| BpiI | GAAGAC | 1 cut(s) | 117 |
| BseXI | GCAGC | 1 cut(s) | 287 |
| BslFI | GGGAC | 1 cut(s) | 143 |
| BsmAI | GTCTC | 1 cut(s) | 177 |
| BsmBI | CGTCTC | 1 cut(s) | 177 |
| BsmFI | GGGAC | 1 cut(s) | 143 |
| Bsp143I | GATC | 1 cut(s) | 356 |
| BspACI | CCGC | 2 cut(s) | 127, 173 |
| BspPI | GGATC | 1 cut(s) | 364 |
| BssMI | GATC | 1 cut(s) | 356 |
| Bst4CI | ACNGT | 1 cut(s) | 134 |
| BstEII | GGTNACC | 1 cut(s) | 138 |
| BstKTI | GATC | 1 cut(s) | 359 |
| BstMAI | GTCTC | 1 cut(s) | 177 |
| BstMBI | GATC | 1 cut(s) | 356 |
| BstPI | GGTNACC | 1 cut(s) | 138 |
| BstV1I | GCAGC | 1 cut(s) | 287 |
| BstV2I | GAAGAC | 1 cut(s) | 117 |
| BtsI | GCAGTG | 1 cut(s) | 354 |
| BtsIMutI | CAGTG | 1 cut(s) | 354 |
| CseI | GACGC | 1 cut(s) | 194 |
| CviAII | CATG | 1 cut(s) | 231 |
| CviJI | RGCY | 3 cut(s) | 162, 300, 400 |
| CviKI_1 | RGCY | 3 cut(s) | 162, 300, 400 |
| DpnI | GATC | 1 cut(s) | 358 |
| DpnII | GATC | 1 cut(s) | 356 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 10 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 10 |
| Eco91I | GGTNACC | 1 cut(s) | 138 |
| EcoO65I | GGTNACC | 1 cut(s) | 138 |
| Esp3I | CGTCTC | 1 cut(s) | 177 |
| FaeI | CATG | 1 cut(s) | 234 |
| FaiI | YATR | 7 cut(s) | 20, 84, 122, 222, 232, 239, 343 |
| FaqI | GGGAC | 1 cut(s) | 143 |
| FatI | CATG | 1 cut(s) | 230 |
| FauI | CCCGC | 1 cut(s) | 120 |
| Fnu4HI | GCNGC | 3 cut(s) | 173, 301, 398 |
| Fsp4HI | GCNGC | 3 cut(s) | 173, 301, 398 |
| FspBI | CTAG | 4 cut(s) | 180, 225, 320, 377 |
| GluI | GCNGC | 3 cut(s) | 173, 301, 398 |
| HgaI | GACGC | 1 cut(s) | 194 |
| Hin1II | CATG | 1 cut(s) | 234 |
| HinfI | GANTC | 1 cut(s) | 146 |
| HphI | GGTGA | 1 cut(s) | 119 |
| Hpy166II | GTNNAC | 1 cut(s) | 261 |
| Hpy188III | TCNNGA | 1 cut(s) | 320 |
| Hpy8I | GTNNAC | 1 cut(s) | 261 |
| HpyCH4III | ACNGT | 1 cut(s) | 134 |
| Hsp92II | CATG | 1 cut(s) | 234 |
| Kzo9I | GATC | 1 cut(s) | 356 |
| LmnI | GCTCC | 1 cut(s) | 193 |
| LpnPI | CCDG | 3 cut(s) | 156, 317, 377 |
| Lsp1109I | GCAGC | 1 cut(s) | 287 |
| LweI | GCATC | 1 cut(s) | 274 |
| MaeI | CTAG | 4 cut(s) | 180, 225, 320, 377 |
| MaeIII | GTNAC | 2 cut(s) | 138, 349 |
| MalI | GATC | 1 cut(s) | 358 |
| MboI | GATC | 1 cut(s) | 356 |
| MboII | GAAGA | 2 cut(s) | 122, 256 |
| MluCI | AATT | 3 cut(s) | 60, 99, 311 |
| MlyI | GAGTC | 1 cut(s) | 140 |
| MmeI | TCCRAC | 2 cut(s) | 215, 316 |
| MnlI | CCTC | 1 cut(s) | 276 |
| MseI | TTAA | 4 cut(s) | 63, 74, 102, 403 |
| NdeII | GATC | 1 cut(s) | 356 |
| NlaIII | CATG | 1 cut(s) | 234 |
| NmuCI | GTSAC | 1 cut(s) | 349 |
| PkrI | GCNGC | 3 cut(s) | 174, 302, 399 |
| PleI | GAGTC | 1 cut(s) | 140 |
| PpsI | GAGTC | 1 cut(s) | 140 |
| PshBI | ATTAAT | 1 cut(s) | 63 |
| PspEI | GGTNACC | 1 cut(s) | 138 |
| SaqAI | TTAA | 4 cut(s) | 63, 74, 102, 403 |
| SatI | GCNGC | 3 cut(s) | 173, 301, 398 |
| Sau3AI | GATC | 1 cut(s) | 356 |
| SchI | GAGTC | 1 cut(s) | 140 |
| SetI | ASST | 5 cut(s) | 109, 181, 201, 268, 402 |
| SfaNI | GCATC | 1 cut(s) | 274 |
| Sse9I | AATT | 3 cut(s) | 60, 99, 311 |
| SsiI | CCGC | 2 cut(s) | 127, 173 |
| SspI | AATATT | 1 cut(s) | 72 |
| SspMI | CTAG | 4 cut(s) | 180, 225, 320, 377 |
| TaaI | ACNGT | 1 cut(s) | 134 |
| TaqI | TCGA | 1 cut(s) | 359 |
| TasI | AATT | 3 cut(s) | 60, 99, 311 |
| TauI | GCSGC | 1 cut(s) | 175 |
| Tru1I | TTAA | 4 cut(s) | 63, 74, 102, 403 |
| Tru9I | TTAA | 4 cut(s) | 63, 74, 102, 403 |
| TscAI | CASTG | 1 cut(s) | 354 |
| TseFI | GTSAC | 1 cut(s) | 349 |
| TseI | GCWGC | 2 cut(s) | 300, 397 |
| Tsp45I | GTSAC | 1 cut(s) | 349 |
| TspDTI | ATGAA | 1 cut(s) | 81 |
| TspRI | CASTG | 1 cut(s) | 354 |
| VspI | ATTAAT | 1 cut(s) | 63 |
| XbaI | TCTAGA | 1 cut(s) | 319 |
| XspI | CTAG | 4 cut(s) | 180, 225, 320, 377 |