Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 14 - 136 | 2e-30 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 155 |
| AccI | GTMKAC | 1 cut(s) | 334 |
| AciI | CCGC | 4 cut(s) | 122, 125, 128, 167 |
| AcyI | GRCGYC | 1 cut(s) | 152 |
| AfaI | GTAC | 1 cut(s) | 393 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 23 |
| AgsI | TTSAA | 2 cut(s) | 188, 214 |
| AhlI | ACTAGT | 1 cut(s) | 253 |
| AluBI | AGCT | 3 cut(s) | 66, 294, 374 |
| AluI | AGCT | 3 cut(s) | 66, 294, 374 |
| Alw26I | GTCTC | 1 cut(s) | 230 |
| AoxI | GGCC | 1 cut(s) | 177 |
| AspS9I | GGNCC | 1 cut(s) | 178 |
| AsuHPI | GGTGA | 3 cut(s) | 122, 147, 328 |
| BccI | CCATC | 3 cut(s) | 41, 169, 476 |
| BcoDI | GTCTC | 1 cut(s) | 230 |
| BcuI | ACTAGT | 1 cut(s) | 253 |
| BfaI | CTAG | 1 cut(s) | 254 |
| BisI | GCNGC | 2 cut(s) | 123, 126 |
| BlsI | GCNGC | 2 cut(s) | 124, 127 |
| BmgT120I | GGNCC | 1 cut(s) | 178 |
| BmsI | GCATC | 1 cut(s) | 454 |
| BsaBI | GATNNNNATC | 1 cut(s) | 483 |
| BsaHI | GRCGYC | 1 cut(s) | 152 |
| BsaWI | WCCGGW | 1 cut(s) | 16 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 11, 41 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 23 |
| Bse3DI | GCAATG | 1 cut(s) | 57 |
| Bse8I | GATNNNNATC | 1 cut(s) | 483 |
| BseGI | GGATG | 2 cut(s) | 106, 469 |
| BseJI | GATNNNNATC | 1 cut(s) | 483 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 23 |
| BseMI | GCAATG | 1 cut(s) | 57 |
| BseRI | GAGGAG | 1 cut(s) | 90 |
| BshFI | GGCC | 1 cut(s) | 179 |
| BsiSI | CCGG | 1 cut(s) | 17 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 23 |
| BsmAI | GTCTC | 1 cut(s) | 230 |
| BsnI | GGCC | 1 cut(s) | 179 |
| BspACI | CCGC | 4 cut(s) | 122, 125, 128, 167 |
| BspANI | GGCC | 1 cut(s) | 179 |
| BsrDI | GCAATG | 1 cut(s) | 57 |
| BssNI | GRCGYC | 1 cut(s) | 152 |
| Bst4CI | ACNGT | 1 cut(s) | 44 |
| BstACI | GRCGYC | 1 cut(s) | 152 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 3 cut(s) | 64, 143, 261 |
| BstF5I | GGATG | 2 cut(s) | 106, 469 |
| BstMAI | GTCTC | 1 cut(s) | 230 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 59, 404 |
| BstNSI | RCATGY | 1 cut(s) | 263 |
| BsuRI | GGCC | 1 cut(s) | 179 |
| BtsCI | GGATG | 2 cut(s) | 106, 469 |
| BtsIMutI | CAGTG | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 3 cut(s) | 64, 143, 261 |
| Cfr13I | GGNCC | 1 cut(s) | 178 |
| Csp6I | GTAC | 1 cut(s) | 392 |
| CviAII | CATG | 5 cut(s) | 164, 260, 359, 389, 404 |
| CviJI | RGCY | 4 cut(s) | 66, 179, 294, 374 |
| CviKI_1 | RGCY | 4 cut(s) | 66, 179, 294, 374 |
| CviQI | GTAC | 1 cut(s) | 392 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 5 cut(s) | 167, 263, 362, 392, 407 |
| FatI | CATG | 5 cut(s) | 163, 259, 358, 388, 403 |
| FblI | GTMKAC | 1 cut(s) | 334 |
| Fnu4HI | GCNGC | 2 cut(s) | 123, 126 |
| FokI | GGATG | 2 cut(s) | 113, 476 |
| Fsp4HI | GCNGC | 2 cut(s) | 123, 126 |
| FspBI | CTAG | 1 cut(s) | 254 |
| GluI | GCNGC | 2 cut(s) | 123, 126 |
| HaeIII | GGCC | 1 cut(s) | 179 |
| HapII | CCGG | 1 cut(s) | 17 |
| Hin1I | GRCGYC | 1 cut(s) | 152 |
| Hin1II | CATG | 5 cut(s) | 167, 263, 362, 392, 407 |
| HindIII | AAGCTT | 1 cut(s) | 292 |
| HinfI | GANTC | 3 cut(s) | 268, 355, 424 |
| HpaII | CCGG | 1 cut(s) | 17 |
| HphI | GGTGA | 3 cut(s) | 122, 147, 328 |
| Hpy166II | GTNNAC | 1 cut(s) | 335 |
| Hpy188I | TCNGA | 1 cut(s) | 429 |
| Hpy188III | TCNNGA | 1 cut(s) | 449 |
| Hpy8I | GTNNAC | 1 cut(s) | 335 |
| HpyAV | CCTTC | 2 cut(s) | 182, 313 |
| HpyCH4III | ACNGT | 1 cut(s) | 44 |
| HpyCH4IV | ACGT | 2 cut(s) | 152, 367 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 39, 62, 145, 222, 259, 278, 398 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 59, 404 |
| HpySE526I | ACGT | 2 cut(s) | 152, 367 |
| Hsp92I | GRCGYC | 1 cut(s) | 152 |
| Hsp92II | CATG | 5 cut(s) | 167, 263, 362, 392, 407 |
| LmnI | GCTCC | 2 cut(s) | 19, 451 |
| LpnPI | CCDG | 3 cut(s) | 8, 30, 354 |
| LweI | GCATC | 1 cut(s) | 454 |
| MaeI | CTAG | 1 cut(s) | 254 |
| MaeII | ACGT | 2 cut(s) | 152, 367 |
| MaeIII | GTNAC | 2 cut(s) | 110, 153 |
| MfeI | CAATTG | 1 cut(s) | 146 |
| MluCI | AATT | 3 cut(s) | 146, 170, 214 |
| MlyI | GAGTC | 2 cut(s) | 262, 433 |
| MnlI | CCTC | 5 cut(s) | 68, 71, 101, 191, 307 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 4 cut(s) | 33, 309, 473, 490 |
| MspI | CCGG | 1 cut(s) | 17 |
| MunI | CAATTG | 1 cut(s) | 146 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 59, 404 |
| NlaIII | CATG | 5 cut(s) | 167, 263, 362, 392, 407 |
| NmuCI | GTSAC | 2 cut(s) | 110, 153 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 263 |
| PaeI | GCATGC | 1 cut(s) | 263 |
| PfeI | GAWTC | 1 cut(s) | 355 |
| PkrI | GCNGC | 2 cut(s) | 124, 127 |
| PleI | GAGTC | 2 cut(s) | 262, 432 |
| PpsI | GAGTC | 2 cut(s) | 262, 432 |
| PspPI | GGNCC | 1 cut(s) | 178 |
| RsaI | GTAC | 1 cut(s) | 393 |
| RsaNI | GTAC | 1 cut(s) | 392 |
| SaqAI | TTAA | 4 cut(s) | 33, 309, 473, 490 |
| SatI | GCNGC | 2 cut(s) | 123, 126 |
| Sau96I | GGNCC | 1 cut(s) | 178 |
| SchI | GAGTC | 2 cut(s) | 262, 433 |
| SfaNI | GCATC | 1 cut(s) | 454 |
| SpeI | ACTAGT | 1 cut(s) | 253 |
| SphI | GCATGC | 1 cut(s) | 263 |
| Sse9I | AATT | 3 cut(s) | 146, 170, 214 |
| SsiI | CCGC | 4 cut(s) | 122, 125, 128, 167 |
| SspMI | CTAG | 1 cut(s) | 254 |
| TaaI | ACNGT | 1 cut(s) | 44 |
| TaiI | ACGT | 2 cut(s) | 155, 370 |
| TasI | AATT | 3 cut(s) | 146, 170, 214 |
| TatI | WGTACW | 1 cut(s) | 391 |
| TauI | GCSGC | 2 cut(s) | 125, 128 |
| TfiI | GAWTC | 1 cut(s) | 355 |
| Tru1I | TTAA | 4 cut(s) | 33, 309, 473, 490 |
| Tru9I | TTAA | 4 cut(s) | 33, 309, 473, 490 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseFI | GTSAC | 2 cut(s) | 110, 153 |
| Tsp45I | GTSAC | 2 cut(s) | 110, 153 |
| TspDTI | ATGAA | 2 cut(s) | 209, 347 |
| TspRI | CASTG | 1 cut(s) | 49 |
| XceI | RCATGY | 1 cut(s) | 263 |
| XmiI | GTMKAC | 1 cut(s) | 334 |
| XspI | CTAG | 1 cut(s) | 254 |
| ZraI | GACGTC | 1 cut(s) | 153 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |