Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 342, 361 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 91 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 193 |
| AjnI | CCWGG | 1 cut(s) | 333 |
| Alw26I | GTCTC | 1 cut(s) | 324 |
| AseI | ATTAAT | 1 cut(s) | 414 |
| AspLEI | GCGC | 1 cut(s) | 177 |
| AspS9I | GGNCC | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 1 cut(s) | 74 |
| AvaII | GGWCC | 1 cut(s) | 95 |
| BccI | CCATC | 1 cut(s) | 308 |
| BciT130I | CCWGG | 1 cut(s) | 335 |
| BcoDI | GTCTC | 1 cut(s) | 324 |
| BfaI | CTAG | 1 cut(s) | 282 |
| BfmI | CTRYAG | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 1 cut(s) | 335 |
| Bme18I | GGWCC | 1 cut(s) | 95 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 1 cut(s) | 95 |
| BmiI | GGNNCC | 2 cut(s) | 96, 97 |
| BmrFI | CCNGG | 1 cut(s) | 335 |
| Bsa29I | ATCGAT | 2 cut(s) | 160, 183 |
| BsaI | GGTCTC | 1 cut(s) | 324 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 91 |
| Bse1I | ACTGG | 1 cut(s) | 367 |
| BseBI | CCWGG | 1 cut(s) | 335 |
| BseCI | ATCGAT | 2 cut(s) | 160, 183 |
| BseGI | GGATG | 2 cut(s) | 136, 343 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BseMII | CTCAG | 1 cut(s) | 156 |
| BseNI | ACTGG | 1 cut(s) | 367 |
| BshVI | ATCGAT | 2 cut(s) | 160, 183 |
| BslFI | GGGAC | 2 cut(s) | 81, 373 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BsmAI | GTCTC | 1 cut(s) | 324 |
| BsmFI | GGGAC | 2 cut(s) | 81, 373 |
| Bso31I | GGTCTC | 1 cut(s) | 324 |
| Bsp143I | GATC | 2 cut(s) | 157, 161 |
| BspCNI | CTCAG | 1 cut(s) | 157 |
| BspDI | ATCGAT | 2 cut(s) | 160, 183 |
| BspLI | GGNNCC | 2 cut(s) | 96, 97 |
| BspTNI | GGTCTC | 1 cut(s) | 324 |
| BsrI | ACTGG | 1 cut(s) | 367 |
| BssMI | GATC | 2 cut(s) | 157, 161 |
| Bst2UI | CCWGG | 1 cut(s) | 335 |
| Bst4CI | ACNGT | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 1 cut(s) | 122 |
| BstDEI | CTNAG | 1 cut(s) | 165 |
| BstF5I | GGATG | 2 cut(s) | 136, 343 |
| BstHHI | GCGC | 1 cut(s) | 177 |
| BstKTI | GATC | 2 cut(s) | 160, 164 |
| BstMAI | GTCTC | 1 cut(s) | 324 |
| BstMBI | GATC | 2 cut(s) | 157, 161 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 59, 278 |
| BstNI | CCWGG | 1 cut(s) | 335 |
| BstSCI | CCNGG | 1 cut(s) | 333 |
| BstSFI | CTRYAG | 1 cut(s) | 107 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 268 |
| Bsu15I | ATCGAT | 2 cut(s) | 160, 183 |
| BsuTUI | ATCGAT | 2 cut(s) | 160, 183 |
| BtsCI | GGATG | 2 cut(s) | 136, 343 |
| Cac8I | GCNNGC | 1 cut(s) | 122 |
| CfoI | GCGC | 1 cut(s) | 177 |
| Cfr13I | GGNCC | 1 cut(s) | 95 |
| ClaI | ATCGAT | 2 cut(s) | 160, 183 |
| Csp6I | GTAC | 2 cut(s) | 341, 360 |
| CviAII | CATG | 3 cut(s) | 20, 40, 323 |
| CviJI | RGCY | 6 cut(s) | 5, 53, 62, 77, 260, 272 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 53, 62, 77, 260, 272 |
| CviQI | GTAC | 2 cut(s) | 341, 360 |
| DdeI | CTNAG | 1 cut(s) | 165 |
| DpnI | GATC | 2 cut(s) | 159, 163 |
| DpnII | GATC | 2 cut(s) | 157, 161 |
| DriI | GACNNNNNGTC | 1 cut(s) | 193 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 193 |
| Eco31I | GGTCTC | 1 cut(s) | 324 |
| Eco47I | GGWCC | 1 cut(s) | 95 |
| EcoO109I | RGGNCCY | 1 cut(s) | 95 |
| EcoRII | CCWGG | 1 cut(s) | 333 |
| FaeI | CATG | 3 cut(s) | 23, 43, 326 |
| FaqI | GGGAC | 2 cut(s) | 81, 373 |
| FatI | CATG | 3 cut(s) | 19, 39, 322 |
| FokI | GGATG | 2 cut(s) | 143, 350 |
| FspBI | CTAG | 1 cut(s) | 282 |
| GlaI | GCGC | 1 cut(s) | 176 |
| HhaI | GCGC | 1 cut(s) | 177 |
| Hin1II | CATG | 3 cut(s) | 23, 43, 326 |
| Hin6I | GCGC | 1 cut(s) | 175 |
| HinP1I | GCGC | 1 cut(s) | 175 |
| HphI | GGTGA | 1 cut(s) | 74 |
| Hpy188I | TCNGA | 3 cut(s) | 166, 225, 242 |
| HpyCH4III | ACNGT | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 1 cut(s) | 37 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 59, 278 |
| HpyF3I | CTNAG | 1 cut(s) | 165 |
| Hsp92II | CATG | 3 cut(s) | 23, 43, 326 |
| HspAI | GCGC | 1 cut(s) | 175 |
| KflI | GGGWCCC | 1 cut(s) | 95 |
| Kzo9I | GATC | 2 cut(s) | 157, 161 |
| LpnPI | CCDG | 5 cut(s) | 48, 320, 347, 348, 413 |
| MaeI | CTAG | 1 cut(s) | 282 |
| MaeIII | GTNAC | 1 cut(s) | 138 |
| MalI | GATC | 2 cut(s) | 159, 163 |
| MboI | GATC | 2 cut(s) | 157, 161 |
| MboII | GAAGA | 2 cut(s) | 167, 229 |
| MluCI | AATT | 1 cut(s) | 289 |
| MnlI | CCTC | 4 cut(s) | 27, 43, 343, 403 |
| MseI | TTAA | 2 cut(s) | 288, 414 |
| MspR9I | CCNGG | 1 cut(s) | 335 |
| MvaI | CCWGG | 1 cut(s) | 335 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 59, 278 |
| NdeII | GATC | 2 cut(s) | 157, 161 |
| NlaIII | CATG | 3 cut(s) | 23, 43, 326 |
| NlaIV | GGNNCC | 2 cut(s) | 96, 97 |
| PfoI | TCCNGGA | 1 cut(s) | 333 |
| PpuMI | RGGWCCY | 1 cut(s) | 95 |
| PshBI | ATTAAT | 1 cut(s) | 414 |
| Psp5II | RGGWCCY | 1 cut(s) | 95 |
| Psp6I | CCWGG | 1 cut(s) | 333 |
| PspGI | CCWGG | 1 cut(s) | 333 |
| PspN4I | GGNNCC | 2 cut(s) | 96, 97 |
| PspPI | GGNCC | 1 cut(s) | 95 |
| PspPPI | RGGWCCY | 1 cut(s) | 95 |
| RsaI | GTAC | 2 cut(s) | 342, 361 |
| RsaNI | GTAC | 2 cut(s) | 341, 360 |
| SaqAI | TTAA | 2 cut(s) | 288, 414 |
| Sau3AI | GATC | 2 cut(s) | 157, 161 |
| Sau96I | GGNCC | 1 cut(s) | 95 |
| ScrFI | CCNGG | 1 cut(s) | 335 |
| SetI | ASST | 3 cut(s) | 108, 376, 382 |
| SfcI | CTRYAG | 1 cut(s) | 107 |
| SinI | GGWCC | 1 cut(s) | 95 |
| Sse9I | AATT | 1 cut(s) | 289 |
| SspI | AATATT | 2 cut(s) | 89, 412 |
| SspMI | CTAG | 1 cut(s) | 282 |
| StyD4I | CCNGG | 1 cut(s) | 333 |
| TaaI | ACNGT | 1 cut(s) | 191 |
| TaqI | TCGA | 2 cut(s) | 160, 183 |
| TasI | AATT | 1 cut(s) | 289 |
| TatI | WGTACW | 2 cut(s) | 340, 359 |
| Tru1I | TTAA | 2 cut(s) | 288, 414 |
| Tru9I | TTAA | 2 cut(s) | 288, 414 |
| VpaK11BI | GGWCC | 1 cut(s) | 95 |
| VspI | ATTAAT | 1 cut(s) | 414 |
| XspI | CTAG | 1 cut(s) | 282 |