Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 125 |
| AcoI | YGGCCR | 1 cut(s) | 27 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 216, 217 |
| AgsI | TTSAA | 1 cut(s) | 176 |
| AluBI | AGCT | 2 cut(s) | 77, 119 |
| AluI | AGCT | 2 cut(s) | 77, 119 |
| Alw26I | GTCTC | 1 cut(s) | 176 |
| AoxI | GGCC | 1 cut(s) | 27 |
| AsuC2I | CCSGG | 1 cut(s) | 31 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| AsuNHI | GCTAGC | 1 cut(s) | 73 |
| BbsI | GAAGAC | 2 cut(s) | 18, 90 |
| BbvCI | CCTCAGC | 1 cut(s) | 120 |
| BccI | CCATC | 1 cut(s) | 160 |
| BceAI | ACGGC | 1 cut(s) | 27 |
| BclI | TGATCA | 1 cut(s) | 49 |
| BcnI | CCSGG | 1 cut(s) | 31 |
| BcoDI | GTCTC | 1 cut(s) | 176 |
| BfaI | CTAG | 1 cut(s) | 74 |
| BfuAI | ACCTGC | 1 cut(s) | 125 |
| BlpI | GCTNAGC | 1 cut(s) | 78 |
| Bme1390I | CCNGG | 1 cut(s) | 31 |
| BmrFI | CCNGG | 1 cut(s) | 31 |
| BmtI | GCTAGC | 1 cut(s) | 77 |
| BpiI | GAAGAC | 2 cut(s) | 18, 90 |
| Bpu10I | CCTNAGC | 1 cut(s) | 120 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 78 |
| BpuMI | CCSGG | 1 cut(s) | 31 |
| BsaJI | CCNNGG | 2 cut(s) | 30, 157 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 216, 217 |
| BseDI | CCNNGG | 2 cut(s) | 30, 157 |
| BseGI | GGATG | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 216, 217 |
| BseMII | CTCAG | 1 cut(s) | 111 |
| BshFI | GGCC | 1 cut(s) | 29 |
| BsiSI | CCGG | 1 cut(s) | 30 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 216, 217 |
| BsmAI | GTCTC | 1 cut(s) | 176 |
| BsnI | GGCC | 1 cut(s) | 29 |
| Bsp143I | GATC | 1 cut(s) | 49 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 78 |
| BspANI | GGCC | 1 cut(s) | 29 |
| BspCNI | CTCAG | 1 cut(s) | 112 |
| BspMI | ACCTGC | 1 cut(s) | 125 |
| BspOI | GCTAGC | 1 cut(s) | 77 |
| BssECI | CCNNGG | 2 cut(s) | 30, 157 |
| BssMI | GATC | 1 cut(s) | 49 |
| BssT1I | CCWWGG | 1 cut(s) | 157 |
| BstC8I | GCNNGC | 2 cut(s) | 75, 147 |
| BstDEI | CTNAG | 2 cut(s) | 78, 120 |
| BstF5I | GGATG | 1 cut(s) | 171 |
| BstKTI | GATC | 1 cut(s) | 52 |
| BstMAI | GTCTC | 1 cut(s) | 176 |
| BstMBI | GATC | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 74, 79 |
| BstSCI | CCNGG | 1 cut(s) | 29 |
| BstV2I | GAAGAC | 2 cut(s) | 18, 90 |
| BsuRI | GGCC | 1 cut(s) | 29 |
| BtsCI | GGATG | 1 cut(s) | 171 |
| BveI | ACCTGC | 1 cut(s) | 125 |
| Cac8I | GCNNGC | 2 cut(s) | 75, 147 |
| CviJI | RGCY | 7 cut(s) | 29, 68, 77, 82, 119, 149, 162 |
| CviKI_1 | RGCY | 7 cut(s) | 29, 68, 77, 82, 119, 149, 162 |
| DdeI | CTNAG | 2 cut(s) | 78, 120 |
| DpnI | GATC | 1 cut(s) | 51 |
| DpnII | GATC | 1 cut(s) | 49 |
| EaeI | YGGCCR | 1 cut(s) | 27 |
| Eco130I | CCWWGG | 1 cut(s) | 157 |
| EcoT14I | CCWWGG | 1 cut(s) | 157 |
| ErhI | CCWWGG | 1 cut(s) | 157 |
| FaiI | YATR | 8 cut(s) | 40, 109, 111, 113, 192, 207, 228, 242 |
| FbaI | TGATCA | 1 cut(s) | 49 |
| FokI | GGATG | 1 cut(s) | 178 |
| FspBI | CTAG | 1 cut(s) | 74 |
| HaeIII | GGCC | 1 cut(s) | 29 |
| HapII | CCGG | 1 cut(s) | 30 |
| HpaII | CCGG | 1 cut(s) | 30 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 1 cut(s) | 238 |
| Hpy188III | TCNNGA | 1 cut(s) | 53 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 74, 79 |
| HpyF3I | CTNAG | 2 cut(s) | 78, 120 |
| Ksp22I | TGATCA | 1 cut(s) | 49 |
| Kzo9I | GATC | 1 cut(s) | 49 |
| LpnPI | CCDG | 4 cut(s) | 43, 120, 131, 148 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MalI | GATC | 1 cut(s) | 51 |
| MboI | GATC | 1 cut(s) | 49 |
| MboII | GAAGA | 3 cut(s) | 23, 90, 233 |
| MluCI | AATT | 1 cut(s) | 125 |
| MnlI | CCTC | 3 cut(s) | 115, 123, 221 |
| MspI | CCGG | 1 cut(s) | 30 |
| MspR9I | CCNGG | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 74, 79 |
| NciI | CCSGG | 1 cut(s) | 31 |
| NdeII | GATC | 1 cut(s) | 49 |
| NheI | GCTAGC | 1 cut(s) | 73 |
| Sau3AI | GATC | 1 cut(s) | 49 |
| ScrFI | CCNGG | 1 cut(s) | 31 |
| SetI | ASST | 4 cut(s) | 79, 121, 139, 247 |
| Sse9I | AATT | 1 cut(s) | 125 |
| SspMI | CTAG | 1 cut(s) | 74 |
| StyD4I | CCNGG | 1 cut(s) | 29 |
| StyI | CCWWGG | 1 cut(s) | 157 |
| TasI | AATT | 1 cut(s) | 125 |
| XspI | CTAG | 1 cut(s) | 74 |