Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 176 |
| AciI | CCGC | 4 cut(s) | 167, 176, 205, 212 |
| AfaI | GTAC | 2 cut(s) | 51, 95 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 36, 150, 201 |
| AgsI | TTSAA | 3 cut(s) | 13, 85, 406 |
| AjnI | CCWGG | 1 cut(s) | 200 |
| ApeKI | GCWGC | 1 cut(s) | 323 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 238, 270 |
| AspLEI | GCGC | 1 cut(s) | 22 |
| AspS9I | GGNCC | 1 cut(s) | 192 |
| AvaII | GGWCC | 1 cut(s) | 192 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 347, 379 |
| BbvI | GCAGC | 1 cut(s) | 310 |
| BccI | CCATC | 1 cut(s) | 327 |
| BciT130I | CCWGG | 1 cut(s) | 202 |
| BfaI | CTAG | 1 cut(s) | 273 |
| BfmI | CTRYAG | 1 cut(s) | 324 |
| BisI | GCNGC | 1 cut(s) | 324 |
| BlsI | GCNGC | 1 cut(s) | 325 |
| BmcAI | AGTACT | 1 cut(s) | 95 |
| Bme1390I | CCNGG | 1 cut(s) | 202 |
| Bme18I | GGWCC | 1 cut(s) | 192 |
| BmgT120I | GGNCC | 1 cut(s) | 192 |
| BmiI | GGNNCC | 1 cut(s) | 193 |
| BmrFI | CCNGG | 1 cut(s) | 202 |
| BmsI | GCATC | 2 cut(s) | 168, 340 |
| BsaAI | YACGTR | 1 cut(s) | 150 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 110, 140 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 36, 150, 201 |
| BseBI | CCWGG | 1 cut(s) | 202 |
| BseGI | GGATG | 1 cut(s) | 220 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 36, 150, 201 |
| BseRI | GAGGAG | 1 cut(s) | 388 |
| BseXI | GCAGC | 1 cut(s) | 310 |
| BslFI | GGGAC | 2 cut(s) | 183, 205 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 36, 150, 201 |
| BsmFI | GGGAC | 2 cut(s) | 183, 205 |
| Bsp143I | GATC | 1 cut(s) | 69 |
| BspACI | CCGC | 4 cut(s) | 167, 176, 205, 212 |
| BspLI | GGNNCC | 1 cut(s) | 193 |
| BspMAI | CTGCAG | 1 cut(s) | 328 |
| BsrBI | CCGCTC | 1 cut(s) | 176 |
| BssMI | GATC | 1 cut(s) | 69 |
| Bst2UI | CCWGG | 1 cut(s) | 202 |
| Bst4CI | ACNGT | 1 cut(s) | 78 |
| BstBAI | YACGTR | 1 cut(s) | 150 |
| BstF5I | GGATG | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 22 |
| BstKTI | GATC | 1 cut(s) | 72 |
| BstMBI | GATC | 1 cut(s) | 69 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 26, 173 |
| BstNI | CCWGG | 1 cut(s) | 202 |
| BstSCI | CCNGG | 1 cut(s) | 200 |
| BstSFI | CTRYAG | 1 cut(s) | 324 |
| BstV1I | GCAGC | 1 cut(s) | 310 |
| BtsCI | GGATG | 1 cut(s) | 220 |
| CfoI | GCGC | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 1 cut(s) | 192 |
| CseI | GACGC | 2 cut(s) | 411, 423 |
| Csp6I | GTAC | 2 cut(s) | 50, 94 |
| CviAII | CATG | 2 cut(s) | 115, 386 |
| CviJI | RGCY | 2 cut(s) | 29, 381 |
| CviKI_1 | RGCY | 2 cut(s) | 29, 381 |
| CviQI | GTAC | 2 cut(s) | 50, 94 |
| DpnI | GATC | 1 cut(s) | 71 |
| DpnII | GATC | 1 cut(s) | 69 |
| Eco47I | GGWCC | 1 cut(s) | 192 |
| EcoRII | CCWGG | 1 cut(s) | 200 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 2 cut(s) | 118, 389 |
| FaiI | YATR | 7 cut(s) | 116, 147, 164, 228, 340, 364, 387 |
| FaqI | GGGAC | 2 cut(s) | 183, 205 |
| FatI | CATG | 2 cut(s) | 114, 385 |
| FauI | CCCGC | 2 cut(s) | 160, 198 |
| Fnu4HI | GCNGC | 1 cut(s) | 324 |
| FokI | GGATG | 1 cut(s) | 227 |
| Fsp4HI | GCNGC | 1 cut(s) | 324 |
| FspBI | CTAG | 1 cut(s) | 273 |
| GlaI | GCGC | 1 cut(s) | 21 |
| GluI | GCNGC | 1 cut(s) | 324 |
| HgaI | GACGC | 2 cut(s) | 411, 423 |
| HhaI | GCGC | 1 cut(s) | 22 |
| Hin1II | CATG | 2 cut(s) | 118, 389 |
| Hin6I | GCGC | 1 cut(s) | 20 |
| HinP1I | GCGC | 1 cut(s) | 20 |
| HincII | GTYRAC | 2 cut(s) | 246, 286 |
| HindII | GTYRAC | 2 cut(s) | 246, 286 |
| HinfI | GANTC | 1 cut(s) | 197 |
| Hpy166II | GTNNAC | 2 cut(s) | 246, 286 |
| Hpy188I | TCNGA | 1 cut(s) | 439 |
| Hpy8I | GTNNAC | 2 cut(s) | 246, 286 |
| Hpy99I | CGWCG | 1 cut(s) | 439 |
| HpyAV | CCTTC | 2 cut(s) | 121, 349 |
| HpyCH4III | ACNGT | 1 cut(s) | 78 |
| HpyCH4IV | ACGT | 1 cut(s) | 149 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 326 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 26, 173 |
| HpySE526I | ACGT | 1 cut(s) | 149 |
| Hsp92II | CATG | 2 cut(s) | 118, 389 |
| HspAI | GCGC | 1 cut(s) | 20 |
| Kzo9I | GATC | 1 cut(s) | 69 |
| LmnI | GCTCC | 2 cut(s) | 113, 412 |
| LpnPI | CCDG | 3 cut(s) | 187, 214, 301 |
| Lsp1109I | GCAGC | 1 cut(s) | 310 |
| LweI | GCATC | 2 cut(s) | 168, 340 |
| MaeI | CTAG | 1 cut(s) | 273 |
| MaeII | ACGT | 1 cut(s) | 149 |
| MaeIII | GTNAC | 1 cut(s) | 180 |
| MalI | GATC | 1 cut(s) | 71 |
| MbiI | CCGCTC | 1 cut(s) | 176 |
| MboI | GATC | 1 cut(s) | 69 |
| MboII | GAAGA | 2 cut(s) | 242, 386 |
| MfeI | CAATTG | 1 cut(s) | 291 |
| MluCI | AATT | 1 cut(s) | 291 |
| MlyI | GAGTC | 1 cut(s) | 206 |
| MmeI | TCCRAC | 1 cut(s) | 417 |
| MnlI | CCTC | 4 cut(s) | 36, 112, 366, 436 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 1 cut(s) | 128 |
| MslI | CAYNNNNRTG | 1 cut(s) | 348 |
| MspR9I | CCNGG | 1 cut(s) | 202 |
| MunI | CAATTG | 1 cut(s) | 291 |
| MvaI | CCWGG | 1 cut(s) | 202 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 26, 173 |
| NdeII | GATC | 1 cut(s) | 69 |
| NlaIII | CATG | 2 cut(s) | 118, 389 |
| NlaIV | GGNNCC | 1 cut(s) | 193 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PflFI | GACNNNGTC | 2 cut(s) | 196, 421 |
| PkrI | GCNGC | 1 cut(s) | 325 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| Ppu21I | YACGTR | 1 cut(s) | 150 |
| Psp6I | CCWGG | 1 cut(s) | 200 |
| PspGI | CCWGG | 1 cut(s) | 200 |
| PspN4I | GGNNCC | 1 cut(s) | 193 |
| PspPI | GGNCC | 1 cut(s) | 192 |
| PstI | CTGCAG | 1 cut(s) | 328 |
| PsyI | GACNNNGTC | 2 cut(s) | 196, 421 |
| RsaI | GTAC | 2 cut(s) | 51, 95 |
| RsaNI | GTAC | 2 cut(s) | 50, 94 |
| RseI | CAYNNNNRTG | 1 cut(s) | 348 |
| SaqAI | TTAA | 1 cut(s) | 128 |
| SatI | GCNGC | 1 cut(s) | 324 |
| Sau3AI | GATC | 1 cut(s) | 69 |
| Sau96I | GGNCC | 1 cut(s) | 192 |
| ScaI | AGTACT | 1 cut(s) | 95 |
| SchI | GAGTC | 1 cut(s) | 206 |
| ScrFI | CCNGG | 1 cut(s) | 202 |
| SetI | ASST | 2 cut(s) | 47, 152 |
| SfaNI | GCATC | 2 cut(s) | 168, 340 |
| SfcI | CTRYAG | 1 cut(s) | 324 |
| SinI | GGWCC | 1 cut(s) | 192 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 348 |
| Sse9I | AATT | 1 cut(s) | 291 |
| SsiI | CCGC | 4 cut(s) | 167, 176, 205, 212 |
| SspMI | CTAG | 1 cut(s) | 273 |
| StyD4I | CCNGG | 1 cut(s) | 200 |
| TaaI | ACNGT | 1 cut(s) | 78 |
| TaiI | ACGT | 1 cut(s) | 152 |
| TaqII | GACCGA | 1 cut(s) | 209 |
| TasI | AATT | 1 cut(s) | 291 |
| TatI | WGTACW | 1 cut(s) | 93 |
| Tru1I | TTAA | 1 cut(s) | 128 |
| Tru9I | TTAA | 1 cut(s) | 128 |
| TseI | GCWGC | 1 cut(s) | 323 |
| TspDTI | ATGAA | 3 cut(s) | 103, 243, 386 |
| Tth111I | GACNNNGTC | 2 cut(s) | 196, 421 |
| VpaK11BI | GGWCC | 1 cut(s) | 192 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 312 |
| XspI | CTAG | 1 cut(s) | 273 |
| ZrmI | AGTACT | 1 cut(s) | 95 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |