ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 291 |
| AciI | CCGC | 1 cut(s) | 146 |
| AclWI | GGATC | 1 cut(s) | 186 |
| AcuI | CTGAAG | 2 cut(s) | 143, 167 |
| AfaI | GTAC | 2 cut(s) | 59, 220 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 162, 163, 175 |
| AflIII | ACRYGT | 1 cut(s) | 108 |
| AgsI | TTSAA | 1 cut(s) | 251 |
| AjnI | CCWGG | 1 cut(s) | 174 |
| AlwI | GGATC | 1 cut(s) | 186 |
| AoxI | GGCC | 2 cut(s) | 153, 261 |
| ApeKI | GCWGC | 2 cut(s) | 242, 287 |
| AspLEI | GCGC | 2 cut(s) | 151, 292 |
| AspS9I | GGNCC | 4 cut(s) | 154, 166, 261, 269 |
| AsuHPI | GGTGA | 1 cut(s) | 199 |
| AvaII | GGWCC | 2 cut(s) | 166, 269 |
| BbvI | GCAGC | 2 cut(s) | 229, 274 |
| BciT130I | CCWGG | 1 cut(s) | 176 |
| BfaI | CTAG | 1 cut(s) | 93 |
| BfoI | RGCGCY | 1 cut(s) | 152 |
| BisI | GCNGC | 3 cut(s) | 147, 243, 288 |
| BlsI | GCNGC | 3 cut(s) | 148, 244, 289 |
| BmcAI | AGTACT | 1 cut(s) | 59 |
| Bme1390I | CCNGG | 1 cut(s) | 176 |
| Bme18I | GGWCC | 2 cut(s) | 166, 269 |
| BmgT120I | GGNCC | 4 cut(s) | 154, 166, 261, 269 |
| BmiI | GGNNCC | 3 cut(s) | 167, 168, 270 |
| BmrFI | CCNGG | 1 cut(s) | 176 |
| BpmI | CTGGAG | 1 cut(s) | 158 |
| BpuEI | CTTGAG | 1 cut(s) | 70 |
| BsaJI | CCNNGG | 1 cut(s) | 264 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 162, 163, 175 |
| Bse1I | ACTGG | 1 cut(s) | 65 |
| BseBI | CCWGG | 1 cut(s) | 176 |
| BseDI | CCNNGG | 1 cut(s) | 264 |
| BseGI | GGATG | 2 cut(s) | 20, 88 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 162, 163, 175 |
| BseNI | ACTGG | 1 cut(s) | 65 |
| BseRI | GAGGAG | 1 cut(s) | 16 |
| BseXI | GCAGC | 2 cut(s) | 229, 274 |
| BseYI | CCCAGC | 1 cut(s) | 156 |
| BshFI | GGCC | 2 cut(s) | 155, 263 |
| BslFI | GGGAC | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 162, 163, 175 |
| BsmFI | GGGAC | 1 cut(s) | 152 |
| BsnI | GGCC | 2 cut(s) | 155, 263 |
| Bsp143I | GATC | 1 cut(s) | 178 |
| BspACI | CCGC | 1 cut(s) | 146 |
| BspANI | GGCC | 2 cut(s) | 155, 263 |
| BspLI | GGNNCC | 3 cut(s) | 167, 168, 270 |
| BspPI | GGATC | 1 cut(s) | 186 |
| BspQI | GCTCTTC | 1 cut(s) | 252 |
| BsrI | ACTGG | 1 cut(s) | 65 |
| BssECI | CCNNGG | 1 cut(s) | 264 |
| BssMI | GATC | 1 cut(s) | 178 |
| BssT1I | CCWWGG | 1 cut(s) | 264 |
| Bst2UI | CCWGG | 1 cut(s) | 176 |
| Bst6I | CTCTTC | 3 cut(s) | 34, 119, 252 |
| BstC8I | GCNNGC | 3 cut(s) | 78, 153, 285 |
| BstF5I | GGATG | 2 cut(s) | 20, 88 |
| BstH2I | RGCGCY | 1 cut(s) | 152 |
| BstHHI | GCGC | 2 cut(s) | 151, 292 |
| BstKTI | GATC | 1 cut(s) | 181 |
| BstMBI | GATC | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 152, 157, 289 |
| BstNI | CCWGG | 1 cut(s) | 176 |
| BstNSI | RCATGY | 2 cut(s) | 112, 193 |
| BstSCI | CCNGG | 1 cut(s) | 174 |
| BstV1I | GCAGC | 2 cut(s) | 229, 274 |
| BstX2I | RGATCY | 1 cut(s) | 178 |
| BstYI | RGATCY | 1 cut(s) | 178 |
| BsuRI | GGCC | 2 cut(s) | 155, 263 |
| BtsCI | GGATG | 2 cut(s) | 20, 88 |
| BtsIMutI | CAGTG | 1 cut(s) | 191 |
| Cac8I | GCNNGC | 3 cut(s) | 78, 153, 285 |
| CfoI | GCGC | 2 cut(s) | 151, 292 |
| Cfr13I | GGNCC | 4 cut(s) | 154, 166, 261, 269 |
| Csp6I | GTAC | 2 cut(s) | 58, 219 |
| CviAII | CATG | 2 cut(s) | 109, 190 |
| CviJI | RGCY | 4 cut(s) | 80, 155, 263, 287 |
| CviKI_1 | RGCY | 4 cut(s) | 80, 155, 263, 287 |
| CviQI | GTAC | 2 cut(s) | 58, 219 |
| DpnI | GATC | 1 cut(s) | 180 |
| DpnII | GATC | 1 cut(s) | 178 |
| DraI | TTTAAA | 1 cut(s) | 232 |
| Eam1104I | CTCTTC | 3 cut(s) | 34, 119, 252 |
| EarI | CTCTTC | 3 cut(s) | 34, 119, 252 |
| Eco130I | CCWWGG | 1 cut(s) | 264 |
| Eco47I | GGWCC | 2 cut(s) | 166, 269 |
| Eco57I | CTGAAG | 2 cut(s) | 143, 167 |
| EcoO109I | RGGNCCY | 2 cut(s) | 166, 269 |
| EcoRII | CCWGG | 1 cut(s) | 174 |
| EcoT14I | CCWWGG | 1 cut(s) | 264 |
| ErhI | CCWWGG | 1 cut(s) | 264 |
| FaeI | CATG | 2 cut(s) | 112, 193 |
| FaiI | YATR | 4 cut(s) | 110, 191, 225, 227 |
| FaqI | GGGAC | 1 cut(s) | 152 |
| FatI | CATG | 2 cut(s) | 108, 189 |
| Fnu4HI | GCNGC | 3 cut(s) | 147, 243, 288 |
| FokI | GGATG | 2 cut(s) | 7, 75 |
| Fsp4HI | GCNGC | 3 cut(s) | 147, 243, 288 |
| FspBI | CTAG | 1 cut(s) | 93 |
| FspI | TGCGCA | 1 cut(s) | 291 |
| GlaI | GCGC | 2 cut(s) | 150, 291 |
| GluI | GCNGC | 3 cut(s) | 147, 243, 288 |
| GsaI | CCCAGC | 1 cut(s) | 160 |
| GsuI | CTGGAG | 1 cut(s) | 158 |
| HaeII | RGCGCY | 1 cut(s) | 152 |
| HaeIII | GGCC | 2 cut(s) | 155, 263 |
| HhaI | GCGC | 2 cut(s) | 151, 292 |
| Hin1II | CATG | 2 cut(s) | 112, 193 |
| Hin6I | GCGC | 2 cut(s) | 149, 290 |
| HinP1I | GCGC | 2 cut(s) | 149, 290 |
| HinfI | GANTC | 1 cut(s) | 96 |
| HphI | GGTGA | 1 cut(s) | 199 |
| Hpy166II | GTNNAC | 1 cut(s) | 221 |
| Hpy188I | TCNGA | 1 cut(s) | 306 |
| Hpy188III | TCNNGA | 1 cut(s) | 49 |
| Hpy8I | GTNNAC | 1 cut(s) | 221 |
| HpyAV | CCTTC | 1 cut(s) | 58 |
| HpyCH4IV | ACGT | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 106, 189, 283 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 152, 157, 289 |
| HpySE526I | ACGT | 1 cut(s) | 7 |
| Hsp92II | CATG | 2 cut(s) | 112, 193 |
| HspAI | GCGC | 2 cut(s) | 149, 290 |
| KflI | GGGWCCC | 1 cut(s) | 166 |
| Kzo9I | GATC | 1 cut(s) | 178 |
| LguI | GCTCTTC | 1 cut(s) | 252 |
| LpnPI | CCDG | 9 cut(s) | 21, 46, 137, 161, 170, 188, 201, 269, 312 |
| Lsp1109I | GCAGC | 2 cut(s) | 229, 274 |
| MaeI | CTAG | 1 cut(s) | 93 |
| MaeII | ACGT | 1 cut(s) | 7 |
| MaeIII | GTNAC | 1 cut(s) | 205 |
| MalI | GATC | 1 cut(s) | 180 |
| MboI | GATC | 1 cut(s) | 178 |
| MboII | GAAGA | 5 cut(s) | 21, 24, 136, 173, 239 |
| MflI | RGATCY | 1 cut(s) | 178 |
| MluCI | AATT | 1 cut(s) | 235 |
| MlyI | GAGTC | 1 cut(s) | 105 |
| MnlI | CCTC | 3 cut(s) | 7, 34, 37 |
| MseI | TTAA | 1 cut(s) | 231 |
| MspR9I | CCNGG | 1 cut(s) | 176 |
| MvaI | CCWGG | 1 cut(s) | 176 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 152, 157, 289 |
| NdeII | GATC | 1 cut(s) | 178 |
| NlaIII | CATG | 2 cut(s) | 112, 193 |
| NlaIV | GGNNCC | 3 cut(s) | 167, 168, 270 |
| NmuCI | GTSAC | 1 cut(s) | 205 |
| NsbI | TGCGCA | 1 cut(s) | 291 |
| NspI | RCATGY | 2 cut(s) | 112, 193 |
| PciI | ACATGT | 1 cut(s) | 108 |
| PciSI | GCTCTTC | 1 cut(s) | 252 |
| PfoI | TCCNGGA | 1 cut(s) | 174 |
| PkrI | GCNGC | 3 cut(s) | 148, 244, 289 |
| PleI | GAGTC | 1 cut(s) | 104 |
| PpsI | GAGTC | 1 cut(s) | 104 |
| PpuMI | RGGWCCY | 2 cut(s) | 166, 269 |
| PscI | ACATGT | 1 cut(s) | 108 |
| Psp5II | RGGWCCY | 2 cut(s) | 166, 269 |
| Psp6I | CCWGG | 1 cut(s) | 174 |
| PspFI | CCCAGC | 1 cut(s) | 156 |
| PspGI | CCWGG | 1 cut(s) | 174 |
| PspN4I | GGNNCC | 3 cut(s) | 167, 168, 270 |
| PspPI | GGNCC | 4 cut(s) | 154, 166, 261, 269 |
| PspPPI | RGGWCCY | 2 cut(s) | 166, 269 |
| PsuI | RGATCY | 1 cut(s) | 178 |
| RsaI | GTAC | 2 cut(s) | 59, 220 |
| RsaNI | GTAC | 2 cut(s) | 58, 219 |
| SapI | GCTCTTC | 1 cut(s) | 252 |
| SaqAI | TTAA | 1 cut(s) | 231 |
| SatI | GCNGC | 3 cut(s) | 147, 243, 288 |
| Sau3AI | GATC | 1 cut(s) | 178 |
| Sau96I | GGNCC | 4 cut(s) | 154, 166, 261, 269 |
| ScaI | AGTACT | 1 cut(s) | 59 |
| SchI | GAGTC | 1 cut(s) | 105 |
| ScrFI | CCNGG | 1 cut(s) | 176 |
| SetI | ASST | 2 cut(s) | 10, 220 |
| SinI | GGWCC | 2 cut(s) | 166, 269 |
| SmlI | CTYRAG | 1 cut(s) | 49 |
| SmoI | CTYRAG | 1 cut(s) | 49 |
| Sse9I | AATT | 1 cut(s) | 235 |
| SsiI | CCGC | 1 cut(s) | 146 |
| SspMI | CTAG | 1 cut(s) | 93 |
| StyD4I | CCNGG | 1 cut(s) | 174 |
| StyI | CCWWGG | 1 cut(s) | 264 |
| TaiI | ACGT | 1 cut(s) | 10 |
| TasI | AATT | 1 cut(s) | 235 |
| TatI | WGTACW | 1 cut(s) | 57 |
| TauI | GCSGC | 1 cut(s) | 149 |
| Tru1I | TTAA | 1 cut(s) | 231 |
| Tru9I | TTAA | 1 cut(s) | 231 |
| TscAI | CASTG | 1 cut(s) | 191 |
| TseFI | GTSAC | 1 cut(s) | 205 |
| TseI | GCWGC | 2 cut(s) | 242, 287 |
| Tsp45I | GTSAC | 1 cut(s) | 205 |
| TspDTI | ATGAA | 1 cut(s) | 77 |
| TspRI | CASTG | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 2 cut(s) | 166, 269 |
| XceI | RCATGY | 2 cut(s) | 112, 193 |
| XspI | CTAG | 1 cut(s) | 93 |
| ZrmI | AGTACT | 1 cut(s) | 59 |