Topless-related protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 2 - 80 | 1.7e-13 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 52 |
| AccBSI | CCGCTC | 1 cut(s) | 23 |
| AciI | CCGC | 1 cut(s) | 23 |
| AfaI | GTAC | 1 cut(s) | 250 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 52 |
| AluBI | AGCT | 1 cut(s) | 221 |
| AluI | AGCT | 1 cut(s) | 221 |
| Alw26I | GTCTC | 1 cut(s) | 65 |
| AspLEI | GCGC | 1 cut(s) | 235 |
| AsuHPI | GGTGA | 1 cut(s) | 35 |
| BbsI | GAAGAC | 1 cut(s) | 20 |
| BccI | CCATC | 1 cut(s) | 50 |
| BceAI | ACGGC | 1 cut(s) | 68 |
| BcoDI | GTCTC | 1 cut(s) | 65 |
| BfaI | CTAG | 1 cut(s) | 243 |
| BglII | AGATCT | 1 cut(s) | 118 |
| BpiI | GAAGAC | 1 cut(s) | 20 |
| BsaI | GGTCTC | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 2 cut(s) | 46, 84 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 52 |
| BseDI | CCNNGG | 2 cut(s) | 46, 84 |
| BseGI | GGATG | 2 cut(s) | 61, 151 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 52 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 52 |
| BsmAI | GTCTC | 1 cut(s) | 65 |
| Bso31I | GGTCTC | 1 cut(s) | 65 |
| Bsp143I | GATC | 1 cut(s) | 118 |
| BspACI | CCGC | 1 cut(s) | 23 |
| BspTNI | GGTCTC | 1 cut(s) | 65 |
| BsrBI | CCGCTC | 1 cut(s) | 23 |
| BssECI | CCNNGG | 2 cut(s) | 46, 84 |
| BssMI | GATC | 1 cut(s) | 118 |
| BssT1I | CCWWGG | 1 cut(s) | 46 |
| Bst4CI | ACNGT | 1 cut(s) | 80 |
| BstDSI | CCRYGG | 1 cut(s) | 84 |
| BstF5I | GGATG | 2 cut(s) | 61, 151 |
| BstHHI | GCGC | 1 cut(s) | 235 |
| BstKTI | GATC | 1 cut(s) | 121 |
| BstMAI | GTCTC | 1 cut(s) | 65 |
| BstMBI | GATC | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 239 |
| BstV2I | GAAGAC | 1 cut(s) | 20 |
| BstX2I | RGATCY | 1 cut(s) | 118 |
| BstYI | RGATCY | 1 cut(s) | 118 |
| BtgI | CCRYGG | 1 cut(s) | 84 |
| BtsCI | GGATG | 2 cut(s) | 61, 151 |
| CfoI | GCGC | 1 cut(s) | 235 |
| Csp6I | GTAC | 1 cut(s) | 249 |
| CviAII | CATG | 1 cut(s) | 52 |
| CviJI | RGCY | 2 cut(s) | 14, 221 |
| CviKI_1 | RGCY | 2 cut(s) | 14, 221 |
| CviQI | GTAC | 1 cut(s) | 249 |
| DpnI | GATC | 1 cut(s) | 120 |
| DpnII | GATC | 1 cut(s) | 118 |
| Eco130I | CCWWGG | 1 cut(s) | 46 |
| Eco31I | GGTCTC | 1 cut(s) | 65 |
| EcoT14I | CCWWGG | 1 cut(s) | 46 |
| ErhI | CCWWGG | 1 cut(s) | 46 |
| FaeI | CATG | 1 cut(s) | 55 |
| FaiI | YATR | 7 cut(s) | 17, 53, 113, 162, 164, 225, 256 |
| FatI | CATG | 1 cut(s) | 51 |
| FauI | CCCGC | 1 cut(s) | 16 |
| FokI | GGATG | 2 cut(s) | 68, 158 |
| FspBI | CTAG | 1 cut(s) | 243 |
| GlaI | GCGC | 1 cut(s) | 234 |
| HhaI | GCGC | 1 cut(s) | 235 |
| Hin1II | CATG | 1 cut(s) | 55 |
| Hin6I | GCGC | 1 cut(s) | 233 |
| HinP1I | GCGC | 1 cut(s) | 233 |
| HphI | GGTGA | 1 cut(s) | 35 |
| Hpy166II | GTNNAC | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 1 cut(s) | 127 |
| Hpy8I | GTNNAC | 1 cut(s) | 64 |
| HpyCH4III | ACNGT | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 2 cut(s) | 153, 170 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 239 |
| Hsp92II | CATG | 1 cut(s) | 55 |
| HspAI | GCGC | 1 cut(s) | 233 |
| Kzo9I | GATC | 1 cut(s) | 118 |
| LpnPI | CCDG | 1 cut(s) | 187 |
| MaeI | CTAG | 1 cut(s) | 243 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 1 cut(s) | 120 |
| MbiI | CCGCTC | 1 cut(s) | 23 |
| MboI | GATC | 1 cut(s) | 118 |
| MboII | GAAGA | 2 cut(s) | 20, 128 |
| MflI | RGATCY | 1 cut(s) | 118 |
| MluCI | AATT | 2 cut(s) | 171, 184 |
| MnlI | CCTC | 3 cut(s) | 4, 121, 187 |
| MseI | TTAA | 1 cut(s) | 102 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 239 |
| NdeII | GATC | 1 cut(s) | 118 |
| NlaIII | CATG | 1 cut(s) | 55 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 52 |
| PsuI | RGATCY | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 250 |
| RsaNI | GTAC | 1 cut(s) | 249 |
| SaqAI | TTAA | 1 cut(s) | 102 |
| Sau3AI | GATC | 1 cut(s) | 118 |
| SetI | ASST | 4 cut(s) | 132, 136, 223, 240 |
| SgeI | CNNG | 6 cut(s) | 36, 59, 64, 97, 214, 251 |
| Sse9I | AATT | 2 cut(s) | 171, 184 |
| SsiI | CCGC | 1 cut(s) | 23 |
| SspMI | CTAG | 1 cut(s) | 243 |
| StyI | CCWWGG | 1 cut(s) | 46 |
| TaaI | ACNGT | 1 cut(s) | 80 |
| TaqII | GACCGA | 1 cut(s) | 89 |
| TasI | AATT | 2 cut(s) | 171, 184 |
| TatI | WGTACW | 1 cut(s) | 248 |
| Tru1I | TTAA | 1 cut(s) | 102 |
| Tru9I | TTAA | 1 cut(s) | 102 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 52 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 53 |
| XspI | CTAG | 1 cut(s) | 243 |