Polygalacturonase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| p450 | PF00067 | 48 - 485 | 4.4e-75 | Cytochrome P450 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 881 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 332, 533 |
| AccI | GTMKAC | 2 cut(s) | 222, 1188 |
| AccII | CGCG | 1 cut(s) | 480 |
| AciI | CCGC | 4 cut(s) | 79, 358, 478, 888 |
| AclWI | GGATC | 6 cut(s) | 227, 338, 490, 674, 735, 839 |
| AcoI | YGGCCR | 1 cut(s) | 1250 |
| AcsI | RAATTY | 4 cut(s) | 1217, 1304, 1332, 1403 |
| AcuI | CTGAAG | 3 cut(s) | 397, 486, 1059 |
| AdeI | CACNNNGTG | 1 cut(s) | 570 |
| AfaI | GTAC | 5 cut(s) | 54, 182, 293, 299, 402 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 110 |
| AflII | CTTAAG | 2 cut(s) | 817, 856 |
| AgsI | TTSAA | 6 cut(s) | 248, 764, 950, 1008, 1286, 1303 |
| AhlI | ACTAGT | 1 cut(s) | 745 |
| AluBI | AGCT | 9 cut(s) | 169, 381, 448, 470, 632, 842, 905, 1196, 1382 |
| AluI | AGCT | 9 cut(s) | 169, 381, 448, 470, 632, 842, 905, 1196, 1382 |
| Alw26I | GTCTC | 4 cut(s) | 402, 801, 855, 1079 |
| AlwI | GGATC | 6 cut(s) | 227, 338, 490, 674, 735, 839 |
| AoxI | GGCC | 2 cut(s) | 1207, 1250 |
| ApeKI | GCWGC | 4 cut(s) | 148, 374, 485, 1025 |
| ApoI | RAATTY | 4 cut(s) | 1217, 1304, 1332, 1403 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 252, 1245 |
| AspLEI | GCGC | 1 cut(s) | 1013 |
| AspS9I | GGNCC | 3 cut(s) | 868, 1207, 1325 |
| AsuHPI | GGTGA | 2 cut(s) | 335, 1241 |
| AvaII | GGWCC | 2 cut(s) | 868, 1325 |
| BbsI | GAAGAC | 1 cut(s) | 1466 |
| BbvI | GCAGC | 4 cut(s) | 135, 386, 497, 1037 |
| BccI | CCATC | 6 cut(s) | 338, 632, 799, 1148, 1254, 1460 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1004, 1038 |
| BciVI | GTATCC | 1 cut(s) | 605 |
| BclI | TGATCA | 1 cut(s) | 132 |
| BcoDI | GTCTC | 4 cut(s) | 402, 801, 855, 1079 |
| BcuI | ACTAGT | 1 cut(s) | 745 |
| BfaI | CTAG | 3 cut(s) | 560, 746, 906 |
| BfmI | CTRYAG | 1 cut(s) | 228 |
| BfoI | RGCGCY | 1 cut(s) | 1014 |
| BfrI | CTTAAG | 2 cut(s) | 817, 856 |
| BfuI | GTATCC | 1 cut(s) | 605 |
| BglII | AGATCT | 1 cut(s) | 1371 |
| BisI | GCNGC | 5 cut(s) | 149, 359, 375, 486, 1026 |
| BlsI | GCNGC | 5 cut(s) | 150, 360, 376, 487, 1027 |
| BmcAI | AGTACT | 2 cut(s) | 54, 402 |
| Bme18I | GGWCC | 2 cut(s) | 868, 1325 |
| BmgT120I | GGNCC | 3 cut(s) | 868, 1207, 1325 |
| BmsI | GCATC | 7 cut(s) | 186, 370, 472, 952, 1082, 1108, 1225 |
| BpiI | GAAGAC | 1 cut(s) | 1466 |
| Bsa29I | ATCGAT | 2 cut(s) | 555, 1464 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1370 |
| BsaJI | CCNNGG | 1 cut(s) | 143 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1167, 1197 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 110 |
| Bse118I | RCCGGY | 1 cut(s) | 1322 |
| Bse1I | ACTGG | 1 cut(s) | 598 |
| Bse3DI | GCAATG | 3 cut(s) | 30, 1145, 1209 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1370 |
| BseCI | ATCGAT | 2 cut(s) | 555, 1464 |
| BseDI | CCNNGG | 1 cut(s) | 143 |
| BseGI | GGATG | 4 cut(s) | 201, 349, 1123, 1218 |
| BseJI | GATNNNNATC | 1 cut(s) | 1370 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BseMI | GCAATG | 3 cut(s) | 30, 1145, 1209 |
| BseMII | CTCAG | 1 cut(s) | 156 |
| BseNI | ACTGG | 1 cut(s) | 598 |
| BseXI | GCAGC | 4 cut(s) | 135, 386, 497, 1037 |
| BsgI | GTGCAG | 1 cut(s) | 134 |
| Bsh1236I | CGCG | 1 cut(s) | 480 |
| Bsh1285I | CGRYCG | 1 cut(s) | 534 |
| BshFI | GGCC | 2 cut(s) | 1209, 1252 |
| BshVI | ATCGAT | 2 cut(s) | 555, 1464 |
| BsiEI | CGRYCG | 1 cut(s) | 534 |
| BsiSI | CCGG | 3 cut(s) | 111, 1210, 1323 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BsmAI | GTCTC | 4 cut(s) | 402, 801, 855, 1079 |
| BsnI | GGCC | 2 cut(s) | 1209, 1252 |
| Bsp1407I | TGTACA | 1 cut(s) | 297 |
| BspACI | CCGC | 4 cut(s) | 79, 358, 478, 888 |
| BspANI | GGCC | 2 cut(s) | 1209, 1252 |
| BspCNI | CTCAG | 1 cut(s) | 157 |
| BspDI | ATCGAT | 2 cut(s) | 555, 1464 |
| BspFNI | CGCG | 1 cut(s) | 480 |
| BspPI | GGATC | 6 cut(s) | 227, 338, 490, 674, 735, 839 |
| BspTI | CTTAAG | 2 cut(s) | 817, 856 |
| BsrDI | GCAATG | 3 cut(s) | 30, 1145, 1209 |
| BsrFI | RCCGGY | 1 cut(s) | 1322 |
| BsrGI | TGTACA | 1 cut(s) | 297 |
| BsrI | ACTGG | 1 cut(s) | 598 |
| BssAI | RCCGGY | 1 cut(s) | 1322 |
| BssECI | CCNNGG | 1 cut(s) | 143 |
| BssNAI | GTATAC | 1 cut(s) | 1189 |
| BssT1I | CCWWGG | 1 cut(s) | 143 |
| Bst1107I | GTATAC | 1 cut(s) | 1189 |
| Bst4CI | ACNGT | 2 cut(s) | 118, 229 |
| Bst6I | CTCTTC | 1 cut(s) | 1236 |
| BstAFI | CTTAAG | 2 cut(s) | 817, 856 |
| BstAUI | TGTACA | 1 cut(s) | 297 |
| BstC8I | GCNNGC | 5 cut(s) | 171, 175, 379, 450, 941 |
| BstDEI | CTNAG | 3 cut(s) | 165, 404, 1091 |
| BstF5I | GGATG | 4 cut(s) | 201, 349, 1123, 1218 |
| BstFNI | CGCG | 1 cut(s) | 480 |
| BstH2I | RGCGCY | 1 cut(s) | 1014 |
| BstHHI | GCGC | 1 cut(s) | 1013 |
| BstMAI | GTCTC | 4 cut(s) | 402, 801, 855, 1079 |
| BstMCI | CGRYCG | 1 cut(s) | 534 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 629, 1319 |
| BstNSI | RCATGY | 2 cut(s) | 177, 1363 |
| BstSFI | CTRYAG | 1 cut(s) | 228 |
| BstUI | CGCG | 1 cut(s) | 480 |
| BstV1I | GCAGC | 4 cut(s) | 135, 386, 497, 1037 |
| BstV2I | GAAGAC | 1 cut(s) | 1466 |
| BstX2I | RGATCY | 3 cut(s) | 232, 495, 1371 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1260, 1466 |
| BstYI | RGATCY | 3 cut(s) | 232, 495, 1371 |
| BstZ17I | GTATAC | 1 cut(s) | 1189 |
| Bsu15I | ATCGAT | 2 cut(s) | 555, 1464 |
| BsuI | GTATCC | 1 cut(s) | 605 |
| BsuRI | GGCC | 2 cut(s) | 1209, 1252 |
| BsuTUI | ATCGAT | 2 cut(s) | 555, 1464 |
| BtgZI | GCGATG | 1 cut(s) | 495 |
| BtsCI | GGATG | 4 cut(s) | 201, 349, 1123, 1218 |
| BtsI | GCAGTG | 2 cut(s) | 424, 705 |
| BtsIMutI | CAGTG | 3 cut(s) | 225, 424, 705 |
| Cac8I | GCNNGC | 5 cut(s) | 171, 175, 379, 450, 941 |
| CfoI | GCGC | 1 cut(s) | 1013 |
| Cfr10I | RCCGGY | 1 cut(s) | 1322 |
| Cfr13I | GGNCC | 3 cut(s) | 868, 1207, 1325 |
| ClaI | ATCGAT | 2 cut(s) | 555, 1464 |
| Csp6I | GTAC | 5 cut(s) | 53, 181, 292, 298, 401 |
| CviAII | CATG | 9 cut(s) | 160, 174, 568, 865, 918, 1070, 1319, 1360, 1478 |
| CviQI | GTAC | 5 cut(s) | 53, 181, 292, 298, 401 |
| DdeI | CTNAG | 3 cut(s) | 165, 404, 1091 |
| DraI | TTTAAA | 1 cut(s) | 798 |
| DraIII | CACNNNGTG | 1 cut(s) | 570 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 332, 533 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 332, 533 |
| EaeI | YGGCCR | 1 cut(s) | 1250 |
| Eam1104I | CTCTTC | 1 cut(s) | 1236 |
| EarI | CTCTTC | 1 cut(s) | 1236 |
| EciI | GGCGGA | 1 cut(s) | 903 |
| Eco130I | CCWWGG | 1 cut(s) | 143 |
| Eco47I | GGWCC | 2 cut(s) | 868, 1325 |
| Eco57I | CTGAAG | 3 cut(s) | 397, 486, 1059 |
| EcoT14I | CCWWGG | 1 cut(s) | 143 |
| EcoT22I | ATGCAT | 1 cut(s) | 1075 |
| ErhI | CCWWGG | 1 cut(s) | 143 |
| FaeI | CATG | 9 cut(s) | 163, 177, 571, 868, 921, 1073, 1322, 1363, 1481 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1032, 1064 |
| FatI | CATG | 9 cut(s) | 159, 173, 567, 864, 917, 1069, 1318, 1359, 1477 |
| FauI | CCCGC | 1 cut(s) | 485 |
| FbaI | TGATCA | 1 cut(s) | 132 |
| FblI | GTMKAC | 2 cut(s) | 222, 1188 |
| Fnu4HI | GCNGC | 5 cut(s) | 149, 359, 375, 486, 1026 |
| FokI | GGATG | 4 cut(s) | 208, 356, 1130, 1225 |
| Fsp4HI | GCNGC | 5 cut(s) | 149, 359, 375, 486, 1026 |
| FspBI | CTAG | 3 cut(s) | 560, 746, 906 |
| GlaI | GCGC | 1 cut(s) | 1012 |
| GluI | GCNGC | 5 cut(s) | 149, 359, 375, 486, 1026 |
| HaeII | RGCGCY | 1 cut(s) | 1014 |
| HaeIII | GGCC | 2 cut(s) | 1209, 1252 |
| HapII | CCGG | 3 cut(s) | 111, 1210, 1323 |
| HhaI | GCGC | 1 cut(s) | 1013 |
| Hin1II | CATG | 9 cut(s) | 163, 177, 571, 868, 921, 1073, 1322, 1363, 1481 |
| Hin6I | GCGC | 1 cut(s) | 1011 |
| HinP1I | GCGC | 1 cut(s) | 1011 |
| HincII | GTYRAC | 1 cut(s) | 1435 |
| HindII | GTYRAC | 1 cut(s) | 1435 |
| HindIII | AAGCTT | 2 cut(s) | 446, 1194 |
| HinfI | GANTC | 4 cut(s) | 527, 675, 1043, 1095 |
| HpaII | CCGG | 3 cut(s) | 111, 1210, 1323 |
| HphI | GGTGA | 2 cut(s) | 335, 1241 |
| Hpy166II | GTNNAC | 6 cut(s) | 223, 274, 510, 751, 1189, 1435 |
| Hpy188I | TCNGA | 8 cut(s) | 212, 313, 366, 466, 645, 781, 996, 1138 |
| Hpy188III | TCNNGA | 3 cut(s) | 560, 1286, 1408 |
| Hpy8I | GTNNAC | 6 cut(s) | 223, 274, 510, 751, 1189, 1435 |
| Hpy99I | CGWCG | 2 cut(s) | 338, 1019 |
| HpyAV | CCTTC | 4 cut(s) | 364, 601, 684, 1324 |
| HpyCH4III | ACNGT | 2 cut(s) | 118, 229 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 629, 1319 |
| HpyF3I | CTNAG | 3 cut(s) | 165, 404, 1091 |
| Hsp92II | CATG | 9 cut(s) | 163, 177, 571, 868, 921, 1073, 1322, 1363, 1481 |
| HspAI | GCGC | 1 cut(s) | 1011 |
| Ksp22I | TGATCA | 1 cut(s) | 132 |
| Lsp1109I | GCAGC | 4 cut(s) | 135, 386, 497, 1037 |
| LweI | GCATC | 7 cut(s) | 186, 370, 472, 952, 1082, 1108, 1225 |
| MaeI | CTAG | 3 cut(s) | 560, 746, 906 |
| MaeIII | GTNAC | 3 cut(s) | 323, 472, 1355 |
| MflI | RGATCY | 3 cut(s) | 232, 495, 1371 |
| MlyI | GAGTC | 2 cut(s) | 521, 1089 |
| MnlI | CCTC | 9 cut(s) | 36, 111, 360, 437, 657, 1423, 1463, 1466, 1498 |
| Mph1103I | ATGCAT | 1 cut(s) | 1075 |
| MroXI | GAANNNNTTC | 2 cut(s) | 252, 1245 |
| MseI | TTAA | 7 cut(s) | 680, 797, 818, 857, 1050, 1167, 1482 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1364, 1464, 1482 |
| MspA1I | CMGCKG | 1 cut(s) | 1382 |
| MspCI | CTTAAG | 2 cut(s) | 817, 856 |
| MspI | CCGG | 3 cut(s) | 111, 1210, 1323 |
| MvnI | CGCG | 1 cut(s) | 480 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 629, 1319 |
| NlaIII | CATG | 9 cut(s) | 163, 177, 571, 868, 921, 1073, 1322, 1363, 1481 |
| NmuCI | GTSAC | 1 cut(s) | 323 |
| NsiI | ATGCAT | 1 cut(s) | 1075 |
| NspI | RCATGY | 2 cut(s) | 177, 1363 |
| PaeI | GCATGC | 1 cut(s) | 177 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1255 |
| PdmI | GAANNNNTTC | 2 cut(s) | 252, 1245 |
| PfeI | GAWTC | 2 cut(s) | 675, 1043 |
| PflFI | GACNNNGTC | 2 cut(s) | 530, 866 |
| PkrI | GCNGC | 5 cut(s) | 150, 360, 376, 487, 1027 |
| PleI | GAGTC | 2 cut(s) | 521, 1089 |
| PpsI | GAGTC | 2 cut(s) | 521, 1089 |
| PsiI | TTATAA | 1 cut(s) | 881 |
| PspPI | GGNCC | 3 cut(s) | 868, 1207, 1325 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 80, 112 |
| PsuI | RGATCY | 3 cut(s) | 232, 495, 1371 |
| PsyI | GACNNNGTC | 2 cut(s) | 530, 866 |
| PvuII | CAGCTG | 1 cut(s) | 1382 |
| RsaI | GTAC | 5 cut(s) | 54, 182, 293, 299, 402 |
| RsaNI | GTAC | 5 cut(s) | 53, 181, 292, 298, 401 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1364, 1464, 1482 |
| SaqAI | TTAA | 7 cut(s) | 680, 797, 818, 857, 1050, 1167, 1482 |
| SatI | GCNGC | 5 cut(s) | 149, 359, 375, 486, 1026 |
| Sau96I | GGNCC | 3 cut(s) | 868, 1207, 1325 |
| ScaI | AGTACT | 2 cut(s) | 54, 402 |
| SchI | GAGTC | 2 cut(s) | 521, 1089 |
| SfaNI | GCATC | 7 cut(s) | 186, 370, 472, 952, 1082, 1108, 1225 |
| SfcI | CTRYAG | 1 cut(s) | 228 |
| SinI | GGWCC | 2 cut(s) | 868, 1325 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1364, 1464, 1482 |
| SmlI | CTYRAG | 2 cut(s) | 817, 856 |
| SmoI | CTYRAG | 2 cut(s) | 817, 856 |
| SpeI | ACTAGT | 1 cut(s) | 745 |
| SphI | GCATGC | 1 cut(s) | 177 |
| SsiI | CCGC | 4 cut(s) | 79, 358, 478, 888 |
| SspMI | CTAG | 3 cut(s) | 560, 746, 906 |
| StyI | CCWWGG | 1 cut(s) | 143 |
| TaaI | ACNGT | 2 cut(s) | 118, 229 |
| TaqI | TCGA | 5 cut(s) | 201, 555, 627, 1407, 1464 |
| TaqII | GACCGA | 3 cut(s) | 520, 1097, 1272 |
| TatI | WGTACW | 4 cut(s) | 52, 180, 297, 400 |
| TauI | GCSGC | 1 cut(s) | 361 |
| TfiI | GAWTC | 2 cut(s) | 675, 1043 |
| Tru1I | TTAA | 7 cut(s) | 680, 797, 818, 857, 1050, 1167, 1482 |
| Tru9I | TTAA | 7 cut(s) | 680, 797, 818, 857, 1050, 1167, 1482 |
| TscAI | CASTG | 3 cut(s) | 232, 424, 705 |
| TseFI | GTSAC | 1 cut(s) | 323 |
| TseI | GCWGC | 4 cut(s) | 148, 374, 485, 1025 |
| Tsp45I | GTSAC | 1 cut(s) | 323 |
| TspDTI | ATGAA | 7 cut(s) | 600, 630, 731, 906, 1229, 1382, 1466 |
| TspRI | CASTG | 3 cut(s) | 232, 424, 705 |
| Tth111I | GACNNNGTC | 2 cut(s) | 530, 866 |
| Vha464I | CTTAAG | 2 cut(s) | 817, 856 |
| VpaK11BI | GGWCC | 2 cut(s) | 868, 1325 |
| XapI | RAATTY | 4 cut(s) | 1217, 1304, 1332, 1403 |
| XbaI | TCTAGA | 1 cut(s) | 559 |
| XceI | RCATGY | 2 cut(s) | 177, 1363 |
| XmiI | GTMKAC | 2 cut(s) | 222, 1188 |
| XmnI | GAANNNNTTC | 2 cut(s) | 252, 1245 |
| XspI | CTAG | 3 cut(s) | 560, 746, 906 |
| ZrmI | AGTACT | 2 cut(s) | 54, 402 |
| Zsp2I | ATGCAT | 1 cut(s) | 1075 |