ribonuclease H protein At1g65750
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 498 |
| AciI | CCGC | 2 cut(s) | 498, 557 |
| AcsI | RAATTY | 3 cut(s) | 321, 505, 525 |
| AcuI | CTGAAG | 1 cut(s) | 251 |
| AfaI | GTAC | 2 cut(s) | 5, 289 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 497, 498 |
| AgsI | TTSAA | 2 cut(s) | 116, 505 |
| AluBI | AGCT | 1 cut(s) | 403 |
| AluI | AGCT | 1 cut(s) | 403 |
| Alw21I | GWGCWC | 1 cut(s) | 160 |
| Alw26I | GTCTC | 1 cut(s) | 584 |
| Alw44I | GTGCAC | 1 cut(s) | 156 |
| AoxI | GGCC | 1 cut(s) | 488 |
| ApaLI | GTGCAC | 1 cut(s) | 156 |
| ApeKI | GCWGC | 1 cut(s) | 353 |
| ApoI | RAATTY | 3 cut(s) | 321, 505, 525 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 583, 615 |
| AspS9I | GGNCC | 2 cut(s) | 489, 575 |
| AsuII | TTCGAA | 1 cut(s) | 407 |
| AvaII | GGWCC | 1 cut(s) | 575 |
| BaeGI | GKGCMC | 1 cut(s) | 160 |
| BauI | CACGAG | 1 cut(s) | 272 |
| Bbv12I | GWGCWC | 1 cut(s) | 160 |
| BbvI | GCAGC | 1 cut(s) | 340 |
| BccI | CCATC | 3 cut(s) | 233, 291, 407 |
| BceAI | ACGGC | 1 cut(s) | 360 |
| BcoDI | GTCTC | 1 cut(s) | 584 |
| BfaI | CTAG | 1 cut(s) | 653 |
| BisI | GCNGC | 1 cut(s) | 354 |
| BlsI | GCNGC | 1 cut(s) | 355 |
| Bme18I | GGWCC | 1 cut(s) | 575 |
| BmgT120I | GGNCC | 2 cut(s) | 489, 575 |
| BmsI | GCATC | 1 cut(s) | 586 |
| Bpu14I | TTCGAA | 1 cut(s) | 407 |
| BpuEI | CTTGAG | 2 cut(s) | 66, 514 |
| BsaJI | CCNNGG | 1 cut(s) | 342 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 497, 498 |
| Bse1I | ACTGG | 3 cut(s) | 11, 295, 706 |
| Bse3DI | GCAATG | 2 cut(s) | 108, 158 |
| BseDI | CCNNGG | 1 cut(s) | 342 |
| BseGI | GGATG | 2 cut(s) | 27, 302 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 497, 498 |
| BseMI | GCAATG | 2 cut(s) | 108, 158 |
| BseMII | CTCAG | 1 cut(s) | 707 |
| BseNI | ACTGG | 3 cut(s) | 11, 295, 706 |
| BseSI | GKGCMC | 1 cut(s) | 160 |
| BseXI | GCAGC | 1 cut(s) | 340 |
| BseYI | CCCAGC | 1 cut(s) | 472 |
| BshFI | GGCC | 1 cut(s) | 490 |
| BsiHKAI | GWGCWC | 1 cut(s) | 160 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 497, 498 |
| BsmAI | GTCTC | 1 cut(s) | 584 |
| BsmI | GAATGC | 2 cut(s) | 220, 303 |
| BsnI | GGCC | 1 cut(s) | 490 |
| Bsp119I | TTCGAA | 1 cut(s) | 407 |
| Bsp1286I | GDGCHC | 1 cut(s) | 160 |
| Bsp143I | GATC | 1 cut(s) | 139 |
| BspACI | CCGC | 2 cut(s) | 498, 557 |
| BspANI | GGCC | 1 cut(s) | 490 |
| BspCNI | CTCAG | 1 cut(s) | 706 |
| BspT104I | TTCGAA | 1 cut(s) | 407 |
| BsrBI | CCGCTC | 1 cut(s) | 498 |
| BsrDI | GCAATG | 2 cut(s) | 108, 158 |
| BsrI | ACTGG | 3 cut(s) | 11, 295, 706 |
| BssECI | CCNNGG | 1 cut(s) | 342 |
| BssMI | GATC | 1 cut(s) | 139 |
| BssSI | CACGAG | 1 cut(s) | 272 |
| Bst2BI | CACGAG | 1 cut(s) | 272 |
| Bst4CI | ACNGT | 1 cut(s) | 379 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 353 |
| BstBI | TTCGAA | 1 cut(s) | 407 |
| BstC8I | GCNNGC | 1 cut(s) | 535 |
| BstDEI | CTNAG | 2 cut(s) | 123, 693 |
| BstDSI | CCRYGG | 1 cut(s) | 342 |
| BstF5I | GGATG | 2 cut(s) | 27, 302 |
| BstKTI | GATC | 1 cut(s) | 142 |
| BstMAI | GTCTC | 1 cut(s) | 584 |
| BstMBI | GATC | 1 cut(s) | 139 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 353 |
| BstNSI | RCATGY | 2 cut(s) | 521, 537 |
| BstSLI | GKGCMC | 1 cut(s) | 160 |
| BstV1I | GCAGC | 1 cut(s) | 340 |
| BsuRI | GGCC | 1 cut(s) | 490 |
| BtgI | CCRYGG | 1 cut(s) | 342 |
| BtsCI | GGATG | 2 cut(s) | 27, 302 |
| BtsIMutI | CAGTG | 1 cut(s) | 289 |
| Cac8I | GCNNGC | 1 cut(s) | 535 |
| Cfr13I | GGNCC | 2 cut(s) | 489, 575 |
| CseI | GACGC | 1 cut(s) | 602 |
| Csp6I | GTAC | 2 cut(s) | 4, 288 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 331, 366 |
| CviAII | CATG | 4 cut(s) | 518, 534, 566, 629 |
| CviJI | RGCY | 9 cut(s) | 80, 248, 341, 391, 403, 490, 652, 680, 692 |
| CviKI_1 | RGCY | 9 cut(s) | 80, 248, 341, 391, 403, 490, 652, 680, 692 |
| CviQI | GTAC | 2 cut(s) | 4, 288 |
| DdeI | CTNAG | 2 cut(s) | 123, 693 |
| DpnI | GATC | 1 cut(s) | 141 |
| DpnII | GATC | 1 cut(s) | 139 |
| Eco47I | GGWCC | 1 cut(s) | 575 |
| Eco57I | CTGAAG | 1 cut(s) | 251 |
| EcoRI | GAATTC | 1 cut(s) | 505 |
| FaeI | CATG | 4 cut(s) | 521, 537, 569, 632 |
| FaiI | YATR | 8 cut(s) | 16, 99, 519, 535, 567, 630, 664, 666 |
| FatI | CATG | 4 cut(s) | 517, 533, 565, 628 |
| FauI | CCCGC | 1 cut(s) | 491 |
| Fnu4HI | GCNGC | 1 cut(s) | 354 |
| FokI | GGATG | 2 cut(s) | 34, 309 |
| Fsp4HI | GCNGC | 1 cut(s) | 354 |
| FspBI | CTAG | 1 cut(s) | 653 |
| GluI | GCNGC | 1 cut(s) | 354 |
| GsaI | CCCAGC | 1 cut(s) | 476 |
| HaeIII | GGCC | 1 cut(s) | 490 |
| HgaI | GACGC | 1 cut(s) | 602 |
| Hin1II | CATG | 4 cut(s) | 521, 537, 569, 632 |
| HincII | GTYRAC | 1 cut(s) | 617 |
| HindII | GTYRAC | 1 cut(s) | 617 |
| HindIII | AAGCTT | 1 cut(s) | 401 |
| HinfI | GANTC | 1 cut(s) | 632 |
| Hpy166II | GTNNAC | 3 cut(s) | 158, 271, 617 |
| Hpy188I | TCNGA | 4 cut(s) | 231, 427, 452, 696 |
| Hpy188III | TCNNGA | 2 cut(s) | 143, 272 |
| Hpy8I | GTNNAC | 3 cut(s) | 158, 271, 617 |
| HpyAV | CCTTC | 3 cut(s) | 168, 226, 422 |
| HpyCH4III | ACNGT | 1 cut(s) | 379 |
| HpyCH4IV | ACGT | 1 cut(s) | 672 |
| HpyCH4V | TGCA | 6 cut(s) | 101, 158, 356, 537, 565, 628 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 353 |
| HpyF3I | CTNAG | 2 cut(s) | 123, 693 |
| HpySE526I | ACGT | 1 cut(s) | 672 |
| Hsp92II | CATG | 4 cut(s) | 521, 537, 569, 632 |
| Kzo9I | GATC | 1 cut(s) | 139 |
| LmnI | GCTCC | 1 cut(s) | 300 |
| LpnPI | CCDG | 9 cut(s) | 4, 16, 128, 276, 315, 458, 525, 591, 633 |
| Lsp1109I | GCAGC | 1 cut(s) | 340 |
| LweI | GCATC | 1 cut(s) | 586 |
| MaeI | CTAG | 1 cut(s) | 653 |
| MaeII | ACGT | 1 cut(s) | 672 |
| MaeIII | GTNAC | 2 cut(s) | 87, 312 |
| MalI | GATC | 1 cut(s) | 141 |
| MbiI | CCGCTC | 1 cut(s) | 498 |
| MboI | GATC | 1 cut(s) | 139 |
| MboII | GAAGA | 2 cut(s) | 217, 248 |
| MfeI | CAATTG | 2 cut(s) | 252, 348 |
| MhlI | GDGCHC | 1 cut(s) | 160 |
| MlyI | GAGTC | 1 cut(s) | 626 |
| MnlI | CCTC | 5 cut(s) | 41, 328, 553, 598, 682 |
| MunI | CAATTG | 2 cut(s) | 252, 348 |
| Mva1269I | GAATGC | 2 cut(s) | 220, 303 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 353 |
| NdeII | GATC | 1 cut(s) | 139 |
| NlaIII | CATG | 4 cut(s) | 521, 537, 569, 632 |
| NspI | RCATGY | 2 cut(s) | 521, 537 |
| NspV | TTCGAA | 1 cut(s) | 407 |
| PaeI | GCATGC | 1 cut(s) | 537 |
| PctI | GAATGC | 2 cut(s) | 220, 303 |
| PflFI | GACNNNGTC | 1 cut(s) | 635 |
| PkrI | GCNGC | 1 cut(s) | 355 |
| PleI | GAGTC | 1 cut(s) | 626 |
| PpsI | GAGTC | 1 cut(s) | 626 |
| PspFI | CCCAGC | 1 cut(s) | 472 |
| PspPI | GGNCC | 2 cut(s) | 489, 575 |
| PsyI | GACNNNGTC | 1 cut(s) | 635 |
| RsaI | GTAC | 2 cut(s) | 5, 289 |
| RsaNI | GTAC | 2 cut(s) | 4, 288 |
| SatI | GCNGC | 1 cut(s) | 354 |
| Sau3AI | GATC | 1 cut(s) | 139 |
| Sau96I | GGNCC | 2 cut(s) | 489, 575 |
| SchI | GAGTC | 1 cut(s) | 626 |
| SduI | GDGCHC | 1 cut(s) | 160 |
| SetI | ASST | 8 cut(s) | 52, 94, 405, 543, 564, 580, 609, 675 |
| SfaNI | GCATC | 1 cut(s) | 586 |
| SfuI | TTCGAA | 1 cut(s) | 407 |
| SinI | GGWCC | 1 cut(s) | 575 |
| SmlI | CTYRAG | 2 cut(s) | 81, 493 |
| SmoI | CTYRAG | 2 cut(s) | 81, 493 |
| SphI | GCATGC | 1 cut(s) | 537 |
| SsiI | CCGC | 2 cut(s) | 498, 557 |
| SspMI | CTAG | 1 cut(s) | 653 |
| TaaI | ACNGT | 1 cut(s) | 379 |
| TaiI | ACGT | 1 cut(s) | 675 |
| TaqI | TCGA | 1 cut(s) | 407 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TscAI | CASTG | 1 cut(s) | 289 |
| TseI | GCWGC | 1 cut(s) | 353 |
| TspRI | CASTG | 1 cut(s) | 289 |
| Tth111I | GACNNNGTC | 1 cut(s) | 635 |
| VneI | GTGCAC | 1 cut(s) | 156 |
| VpaK11BI | GGWCC | 1 cut(s) | 575 |
| XapI | RAATTY | 3 cut(s) | 321, 505, 525 |
| XceI | RCATGY | 2 cut(s) | 521, 537 |
| XspI | CTAG | 1 cut(s) | 653 |