Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 558 |
| AccBSI | CCGCTC | 1 cut(s) | 400 |
| AccI | GTMKAC | 1 cut(s) | 369 |
| AccIII | TCCGGA | 1 cut(s) | 457 |
| AciI | CCGC | 2 cut(s) | 400, 619 |
| AclWI | GGATC | 1 cut(s) | 545 |
| AdeI | CACNNNGTG | 1 cut(s) | 319 |
| AfaI | GTAC | 2 cut(s) | 98, 276 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 545, 654 |
| AgeI | ACCGGT | 1 cut(s) | 654 |
| AgsI | TTSAA | 4 cut(s) | 10, 212, 342, 543 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 432 |
| AhlI | ACTAGT | 1 cut(s) | 305 |
| AjnI | CCWGG | 2 cut(s) | 89, 595 |
| Alw26I | GTCTC | 2 cut(s) | 141, 645 |
| AlwI | GGATC | 1 cut(s) | 545 |
| Aor13HI | TCCGGA | 1 cut(s) | 457 |
| ApeKI | GCWGC | 1 cut(s) | 520 |
| AsiGI | ACCGGT | 1 cut(s) | 654 |
| AsuHPI | GGTGA | 3 cut(s) | 144, 493, 560 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 294, 327 |
| BbsI | GAAGAC | 1 cut(s) | 193 |
| BbvI | GCAGC | 1 cut(s) | 532 |
| BccI | CCATC | 5 cut(s) | 48, 163, 221, 304, 502 |
| BciT130I | CCWGG | 2 cut(s) | 91, 597 |
| BciVI | GTATCC | 1 cut(s) | 665 |
| BcoDI | GTCTC | 2 cut(s) | 141, 645 |
| BcuI | ACTAGT | 1 cut(s) | 305 |
| BfaI | CTAG | 7 cut(s) | 204, 279, 306, 365, 419, 432, 530 |
| BfuI | GTATCC | 1 cut(s) | 665 |
| BisI | GCNGC | 2 cut(s) | 401, 521 |
| BlsI | GCNGC | 2 cut(s) | 402, 522 |
| Bme1390I | CCNGG | 2 cut(s) | 91, 597 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 432 |
| BmrFI | CCNGG | 2 cut(s) | 91, 597 |
| BmrI | ACTGGG | 1 cut(s) | 687 |
| BmsI | GCATC | 2 cut(s) | 325, 507 |
| BmuI | ACTGGG | 1 cut(s) | 687 |
| BpiI | GAAGAC | 1 cut(s) | 193 |
| BpuEI | CTTGAG | 1 cut(s) | 219 |
| BsaI | GGTCTC | 1 cut(s) | 645 |
| BsaWI | WCCGGW | 2 cut(s) | 457, 654 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 545, 654 |
| Bse118I | RCCGGY | 2 cut(s) | 345, 654 |
| Bse1I | ACTGG | 3 cut(s) | 500, 550, 682 |
| Bse3DI | GCAATG | 4 cut(s) | 84, 118, 356, 688 |
| BseAI | TCCGGA | 1 cut(s) | 457 |
| BseBI | CCWGG | 2 cut(s) | 91, 597 |
| BseGI | GGATG | 5 cut(s) | 59, 247, 296, 513, 517 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 545, 654 |
| BseMI | GCAATG | 4 cut(s) | 84, 118, 356, 688 |
| BseNI | ACTGG | 3 cut(s) | 500, 550, 682 |
| BseXI | GCAGC | 1 cut(s) | 532 |
| BshTI | ACCGGT | 1 cut(s) | 654 |
| BsiSI | CCGG | 3 cut(s) | 346, 458, 655 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 545, 654 |
| BsmAI | GTCTC | 2 cut(s) | 141, 645 |
| BsmI | GAATGC | 1 cut(s) | 174 |
| Bso31I | GGTCTC | 1 cut(s) | 645 |
| Bsp13I | TCCGGA | 1 cut(s) | 457 |
| Bsp1407I | TGTACA | 1 cut(s) | 96 |
| Bsp143I | GATC | 1 cut(s) | 550 |
| BspACI | CCGC | 2 cut(s) | 400, 619 |
| BspEI | TCCGGA | 1 cut(s) | 457 |
| BspPI | GGATC | 1 cut(s) | 545 |
| BspTNI | GGTCTC | 1 cut(s) | 645 |
| BsrBI | CCGCTC | 1 cut(s) | 400 |
| BsrDI | GCAATG | 4 cut(s) | 84, 118, 356, 688 |
| BsrFI | RCCGGY | 2 cut(s) | 345, 654 |
| BsrGI | TGTACA | 1 cut(s) | 96 |
| BsrI | ACTGG | 3 cut(s) | 500, 550, 682 |
| BssAI | RCCGGY | 2 cut(s) | 345, 654 |
| BssMI | GATC | 1 cut(s) | 550 |
| BssNAI | GTATAC | 1 cut(s) | 370 |
| Bst1107I | GTATAC | 1 cut(s) | 370 |
| Bst2UI | CCWGG | 2 cut(s) | 91, 597 |
| BstAUI | TGTACA | 1 cut(s) | 96 |
| BstC8I | GCNNGC | 3 cut(s) | 42, 347, 628 |
| BstF5I | GGATG | 5 cut(s) | 59, 247, 296, 513, 517 |
| BstKTI | GATC | 1 cut(s) | 553 |
| BstMAI | GTCTC | 2 cut(s) | 141, 645 |
| BstMBI | GATC | 1 cut(s) | 550 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 41 |
| BstNI | CCWGG | 2 cut(s) | 91, 597 |
| BstNSI | RCATGY | 1 cut(s) | 527 |
| BstSCI | CCNGG | 2 cut(s) | 89, 595 |
| BstV1I | GCAGC | 1 cut(s) | 532 |
| BstV2I | GAAGAC | 1 cut(s) | 193 |
| BstZ17I | GTATAC | 1 cut(s) | 370 |
| BsuI | GTATCC | 1 cut(s) | 665 |
| BtsCI | GGATG | 5 cut(s) | 59, 247, 296, 513, 517 |
| BtsIMutI | CAGTG | 1 cut(s) | 675 |
| Cac8I | GCNNGC | 3 cut(s) | 42, 347, 628 |
| Cfr10I | RCCGGY | 2 cut(s) | 345, 654 |
| Csp6I | GTAC | 2 cut(s) | 97, 275 |
| CspAI | ACCGGT | 1 cut(s) | 654 |
| CviAII | CATG | 2 cut(s) | 389, 524 |
| CviJI | RGCY | 7 cut(s) | 6, 262, 323, 345, 403, 471, 626 |
| CviKI_1 | RGCY | 7 cut(s) | 6, 262, 323, 345, 403, 471, 626 |
| CviQI | GTAC | 2 cut(s) | 97, 275 |
| DpnI | GATC | 1 cut(s) | 552 |
| DpnII | GATC | 1 cut(s) | 550 |
| DraIII | CACNNNGTG | 1 cut(s) | 319 |
| DriI | GACNNNNNGTC | 1 cut(s) | 432 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 432 |
| Eco31I | GGTCTC | 1 cut(s) | 645 |
| EcoRII | CCWGG | 2 cut(s) | 89, 595 |
| FaeI | CATG | 2 cut(s) | 392, 527 |
| FatI | CATG | 2 cut(s) | 388, 523 |
| FblI | GTMKAC | 1 cut(s) | 369 |
| Fnu4HI | GCNGC | 2 cut(s) | 401, 521 |
| FokI | GGATG | 5 cut(s) | 66, 254, 283, 520, 524 |
| Fsp4HI | GCNGC | 2 cut(s) | 401, 521 |
| FspBI | CTAG | 7 cut(s) | 204, 279, 306, 365, 419, 432, 530 |
| GluI | GCNGC | 2 cut(s) | 401, 521 |
| HapII | CCGG | 3 cut(s) | 346, 458, 655 |
| Hin1II | CATG | 2 cut(s) | 392, 527 |
| HinfI | GANTC | 3 cut(s) | 13, 149, 454 |
| HpaII | CCGG | 3 cut(s) | 346, 458, 655 |
| HphI | GGTGA | 3 cut(s) | 144, 493, 560 |
| Hpy166II | GTNNAC | 3 cut(s) | 313, 360, 370 |
| Hpy188I | TCNGA | 2 cut(s) | 301, 507 |
| Hpy188III | TCNNGA | 3 cut(s) | 10, 437, 458 |
| Hpy8I | GTNNAC | 3 cut(s) | 313, 360, 370 |
| HpyAV | CCTTC | 3 cut(s) | 136, 549, 577 |
| HpyCH4V | TGCA | 2 cut(s) | 520, 630 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 41 |
| Hsp92II | CATG | 2 cut(s) | 392, 527 |
| Kpn2I | TCCGGA | 1 cut(s) | 457 |
| KroI | GCCGGC | 1 cut(s) | 345 |
| KroNI | GCCGGC | 1 cut(s) | 347 |
| Kzo9I | GATC | 1 cut(s) | 550 |
| LmnI | GCTCC | 1 cut(s) | 128 |
| Lsp1109I | GCAGC | 1 cut(s) | 532 |
| LweI | GCATC | 2 cut(s) | 325, 507 |
| MaeI | CTAG | 7 cut(s) | 204, 279, 306, 365, 419, 432, 530 |
| MaeIII | GTNAC | 1 cut(s) | 657 |
| MalI | GATC | 1 cut(s) | 552 |
| MbiI | CCGCTC | 1 cut(s) | 400 |
| MboI | GATC | 1 cut(s) | 550 |
| MboII | GAAGA | 2 cut(s) | 198, 229 |
| MluCI | AATT | 6 cut(s) | 60, 141, 285, 325, 330, 683 |
| MlyI | GAGTC | 2 cut(s) | 143, 463 |
| MnlI | CCTC | 4 cut(s) | 84, 127, 426, 564 |
| MroI | TCCGGA | 1 cut(s) | 457 |
| MroNI | GCCGGC | 1 cut(s) | 345 |
| MseI | TTAA | 1 cut(s) | 329 |
| MspI | CCGG | 3 cut(s) | 346, 458, 655 |
| MspR9I | CCNGG | 2 cut(s) | 91, 597 |
| Mva1269I | GAATGC | 1 cut(s) | 174 |
| MvaI | CCWGG | 2 cut(s) | 91, 597 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 41 |
| NaeI | GCCGGC | 1 cut(s) | 347 |
| NdeII | GATC | 1 cut(s) | 550 |
| NgoMIV | GCCGGC | 1 cut(s) | 345 |
| NlaIII | CATG | 2 cut(s) | 392, 527 |
| NspI | RCATGY | 1 cut(s) | 527 |
| PctI | GAATGC | 1 cut(s) | 174 |
| PdiI | GCCGGC | 1 cut(s) | 347 |
| PfeI | GAWTC | 1 cut(s) | 13 |
| PinAI | ACCGGT | 1 cut(s) | 654 |
| PkrI | GCNGC | 2 cut(s) | 402, 522 |
| PleI | GAGTC | 2 cut(s) | 143, 462 |
| PpsI | GAGTC | 2 cut(s) | 143, 462 |
| PsiI | TTATAA | 1 cut(s) | 558 |
| Psp6I | CCWGG | 2 cut(s) | 89, 595 |
| PspGI | CCWGG | 2 cut(s) | 89, 595 |
| RsaI | GTAC | 2 cut(s) | 98, 276 |
| RsaNI | GTAC | 2 cut(s) | 97, 275 |
| SaqAI | TTAA | 1 cut(s) | 329 |
| SatI | GCNGC | 2 cut(s) | 401, 521 |
| Sau3AI | GATC | 1 cut(s) | 550 |
| SchI | GAGTC | 2 cut(s) | 143, 463 |
| ScrFI | CCNGG | 2 cut(s) | 91, 597 |
| SetI | ASST | 6 cut(s) | 95, 280, 321, 378, 424, 606 |
| SfaNI | GCATC | 2 cut(s) | 325, 507 |
| SmlI | CTYRAG | 1 cut(s) | 234 |
| SmoI | CTYRAG | 1 cut(s) | 234 |
| SpeI | ACTAGT | 1 cut(s) | 305 |
| Sse9I | AATT | 6 cut(s) | 60, 141, 285, 325, 330, 683 |
| SsiI | CCGC | 2 cut(s) | 400, 619 |
| SspI | AATATT | 2 cut(s) | 31, 577 |
| SspMI | CTAG | 7 cut(s) | 204, 279, 306, 365, 419, 432, 530 |
| StyD4I | CCNGG | 2 cut(s) | 89, 595 |
| TaqI | TCGA | 2 cut(s) | 703, 709 |
| TasI | AATT | 6 cut(s) | 60, 141, 285, 325, 330, 683 |
| TatI | WGTACW | 1 cut(s) | 96 |
| TauI | GCSGC | 1 cut(s) | 403 |
| TfiI | GAWTC | 1 cut(s) | 13 |
| Tru1I | TTAA | 1 cut(s) | 329 |
| Tru9I | TTAA | 1 cut(s) | 329 |
| TscAI | CASTG | 1 cut(s) | 682 |
| TseI | GCWGC | 1 cut(s) | 520 |
| TspRI | CASTG | 1 cut(s) | 682 |
| XceI | RCATGY | 1 cut(s) | 527 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 162 |
| XmiI | GTMKAC | 1 cut(s) | 369 |
| XspI | CTAG | 7 cut(s) | 204, 279, 306, 365, 419, 432, 530 |