Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 162, 186 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 294 |
| AgsI | TTSAA | 4 cut(s) | 113, 443, 506, 521 |
| AluBI | AGCT | 6 cut(s) | 19, 35, 130, 171, 255, 593 |
| AluI | AGCT | 6 cut(s) | 19, 35, 130, 171, 255, 593 |
| Alw26I | GTCTC | 2 cut(s) | 356, 372 |
| ApoI | RAATTY | 2 cut(s) | 162, 186 |
| AseI | ATTAAT | 2 cut(s) | 411, 564 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 585 |
| AsuHPI | GGTGA | 3 cut(s) | 375, 380, 528 |
| AsuNHI | GCTAGC | 1 cut(s) | 19 |
| BbsI | GAAGAC | 1 cut(s) | 104 |
| BccI | CCATC | 2 cut(s) | 452, 483 |
| BcoDI | GTCTC | 2 cut(s) | 356, 372 |
| BfaI | CTAG | 3 cut(s) | 20, 576, 630 |
| BglII | AGATCT | 1 cut(s) | 25 |
| BmrI | ACTGGG | 1 cut(s) | 444 |
| BmtI | GCTAGC | 1 cut(s) | 23 |
| BmuI | ACTGGG | 1 cut(s) | 444 |
| BpiI | GAAGAC | 1 cut(s) | 104 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 294 |
| Bse1I | ACTGG | 2 cut(s) | 332, 439 |
| Bse3DI | GCAATG | 1 cut(s) | 621 |
| BseGI | GGATG | 1 cut(s) | 463 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BseMI | GCAATG | 1 cut(s) | 621 |
| BseMII | CTCAG | 2 cut(s) | 71, 181 |
| BseNI | ACTGG | 2 cut(s) | 332, 439 |
| BsiSI | CCGG | 1 cut(s) | 614 |
| BslFI | GGGAC | 1 cut(s) | 353 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BsmAI | GTCTC | 2 cut(s) | 356, 372 |
| BsmFI | GGGAC | 1 cut(s) | 353 |
| Bsp143I | GATC | 1 cut(s) | 25 |
| BspCNI | CTCAG | 2 cut(s) | 72, 180 |
| BspHI | TCATGA | 1 cut(s) | 49 |
| BspOI | GCTAGC | 1 cut(s) | 23 |
| BsrDI | GCAATG | 1 cut(s) | 621 |
| BsrI | ACTGG | 2 cut(s) | 332, 439 |
| BssMI | GATC | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 3 cut(s) | 424, 540, 598 |
| Bst6I | CTCTTC | 1 cut(s) | 35 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 214 |
| BstC8I | GCNNGC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 3 cut(s) | 80, 167, 648 |
| BstF5I | GGATG | 1 cut(s) | 463 |
| BstKTI | GATC | 1 cut(s) | 28 |
| BstMAI | GTCTC | 2 cut(s) | 356, 372 |
| BstMBI | GATC | 1 cut(s) | 25 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 214, 623 |
| BstV2I | GAAGAC | 1 cut(s) | 104 |
| BstX2I | RGATCY | 1 cut(s) | 25 |
| BstYI | RGATCY | 1 cut(s) | 25 |
| BtsCI | GGATG | 1 cut(s) | 463 |
| BtsIMutI | CAGTG | 1 cut(s) | 325 |
| Cac8I | GCNNGC | 1 cut(s) | 21 |
| CciI | TCATGA | 1 cut(s) | 49 |
| CviAII | CATG | 4 cut(s) | 50, 56, 229, 396 |
| DdeI | CTNAG | 3 cut(s) | 80, 167, 648 |
| DpnI | GATC | 1 cut(s) | 27 |
| DpnII | GATC | 1 cut(s) | 25 |
| Eam1104I | CTCTTC | 1 cut(s) | 35 |
| EarI | CTCTTC | 1 cut(s) | 35 |
| FaeI | CATG | 4 cut(s) | 53, 59, 232, 399 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 114, 146 |
| FaqI | GGGAC | 1 cut(s) | 353 |
| FatI | CATG | 4 cut(s) | 49, 55, 228, 395 |
| FokI | GGATG | 1 cut(s) | 470 |
| FspBI | CTAG | 3 cut(s) | 20, 576, 630 |
| HapII | CCGG | 1 cut(s) | 614 |
| Hin1II | CATG | 4 cut(s) | 53, 59, 232, 399 |
| HindIII | AAGCTT | 1 cut(s) | 128 |
| HinfI | GANTC | 5 cut(s) | 7, 380, 493, 586, 634 |
| HpaII | CCGG | 1 cut(s) | 614 |
| HphI | GGTGA | 3 cut(s) | 375, 380, 528 |
| Hpy166II | GTNNAC | 2 cut(s) | 371, 472 |
| Hpy188I | TCNGA | 1 cut(s) | 81 |
| Hpy188III | TCNNGA | 1 cut(s) | 50 |
| Hpy8I | GTNNAC | 2 cut(s) | 371, 472 |
| HpyAV | CCTTC | 2 cut(s) | 298, 396 |
| HpyCH4III | ACNGT | 3 cut(s) | 424, 540, 598 |
| HpyCH4V | TGCA | 1 cut(s) | 208 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 214, 623 |
| HpyF3I | CTNAG | 3 cut(s) | 80, 167, 648 |
| Hsp92II | CATG | 4 cut(s) | 53, 59, 232, 399 |
| Kzo9I | GATC | 1 cut(s) | 25 |
| LpnPI | CCDG | 7 cut(s) | 313, 420, 452, 500, 586, 603, 627 |
| MaeI | CTAG | 3 cut(s) | 20, 576, 630 |
| MaeIII | GTNAC | 1 cut(s) | 236 |
| MalI | GATC | 1 cut(s) | 27 |
| MboI | GATC | 1 cut(s) | 25 |
| MboII | GAAGA | 5 cut(s) | 52, 109, 328, 429, 460 |
| MflI | RGATCY | 1 cut(s) | 25 |
| MluCI | AATT | 5 cut(s) | 11, 162, 186, 232, 501 |
| MlyI | GAGTC | 1 cut(s) | 374 |
| MmeI | TCCRAC | 1 cut(s) | 131 |
| MnlI | CCTC | 3 cut(s) | 228, 358, 537 |
| MroXI | GAANNNNTTC | 1 cut(s) | 585 |
| MseI | TTAA | 4 cut(s) | 195, 411, 429, 564 |
| MslI | CAYNNNNRTG | 2 cut(s) | 54, 394 |
| MspA1I | CMGCKG | 1 cut(s) | 171 |
| MspI | CCGG | 1 cut(s) | 614 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 214, 623 |
| NdeII | GATC | 1 cut(s) | 25 |
| NheI | GCTAGC | 1 cut(s) | 19 |
| NlaIII | CATG | 4 cut(s) | 53, 59, 232, 399 |
| PagI | TCATGA | 1 cut(s) | 49 |
| PdmI | GAANNNNTTC | 1 cut(s) | 585 |
| PfeI | GAWTC | 3 cut(s) | 493, 586, 634 |
| PleI | GAGTC | 1 cut(s) | 374 |
| PpsI | GAGTC | 1 cut(s) | 374 |
| PshBI | ATTAAT | 2 cut(s) | 411, 564 |
| PsuI | RGATCY | 1 cut(s) | 25 |
| PvuII | CAGCTG | 1 cut(s) | 171 |
| RseI | CAYNNNNRTG | 2 cut(s) | 54, 394 |
| SaqAI | TTAA | 4 cut(s) | 195, 411, 429, 564 |
| Sau3AI | GATC | 1 cut(s) | 25 |
| SchI | GAGTC | 1 cut(s) | 374 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 54, 394 |
| Sse9I | AATT | 5 cut(s) | 11, 162, 186, 232, 501 |
| SspMI | CTAG | 3 cut(s) | 20, 576, 630 |
| TaaI | ACNGT | 3 cut(s) | 424, 540, 598 |
| TaqI | TCGA | 1 cut(s) | 95 |
| TasI | AATT | 5 cut(s) | 11, 162, 186, 232, 501 |
| TfiI | GAWTC | 3 cut(s) | 493, 586, 634 |
| Tru1I | TTAA | 4 cut(s) | 195, 411, 429, 564 |
| Tru9I | TTAA | 4 cut(s) | 195, 411, 429, 564 |
| TscAI | CASTG | 1 cut(s) | 332 |
| TspDTI | ATGAA | 4 cut(s) | 38, 245, 260, 378 |
| TspRI | CASTG | 1 cut(s) | 332 |
| VspI | ATTAAT | 2 cut(s) | 411, 564 |
| XapI | RAATTY | 2 cut(s) | 162, 186 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 597 |
| XmnI | GAANNNNTTC | 1 cut(s) | 585 |
| XspI | CTAG | 3 cut(s) | 20, 576, 630 |