ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 119, 296 |
| AcsI | RAATTY | 1 cut(s) | 282 |
| AfaI | GTAC | 2 cut(s) | 126, 578 |
| AgsI | TTSAA | 7 cut(s) | 32, 62, 107, 192, 217, 338, 560 |
| AjnI | CCWGG | 1 cut(s) | 498 |
| AluBI | AGCT | 3 cut(s) | 69, 186, 330 |
| AluI | AGCT | 3 cut(s) | 69, 186, 330 |
| Alw26I | GTCTC | 1 cut(s) | 99 |
| AoxI | GGCC | 1 cut(s) | 501 |
| ApeKI | GCWGC | 3 cut(s) | 46, 69, 330 |
| ApoI | RAATTY | 1 cut(s) | 282 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 225 |
| AsuC2I | CCSGG | 2 cut(s) | 542, 574 |
| AsuHPI | GGTGA | 1 cut(s) | 193 |
| BbvI | GCAGC | 3 cut(s) | 56, 58, 317 |
| BccI | CCATC | 2 cut(s) | 370, 516 |
| BceAI | ACGGC | 1 cut(s) | 69 |
| BciT130I | CCWGG | 1 cut(s) | 500 |
| BcnI | CCSGG | 2 cut(s) | 542, 574 |
| BcoDI | GTCTC | 1 cut(s) | 99 |
| BfaI | CTAG | 3 cut(s) | 128, 381, 509 |
| BisI | GCNGC | 4 cut(s) | 47, 70, 120, 331 |
| BlpI | GCTNAGC | 1 cut(s) | 263 |
| BlsI | GCNGC | 4 cut(s) | 48, 71, 121, 332 |
| Bme1390I | CCNGG | 3 cut(s) | 500, 542, 574 |
| BmrFI | CCNGG | 3 cut(s) | 500, 542, 574 |
| BmsI | GCATC | 3 cut(s) | 81, 376, 456 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 263 |
| BpuMI | CCSGG | 2 cut(s) | 542, 574 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 387, 417 |
| Bse1I | ACTGG | 1 cut(s) | 392 |
| BseBI | CCWGG | 1 cut(s) | 500 |
| BseGI | GGATG | 3 cut(s) | 432, 447, 527 |
| BseMII | CTCAG | 1 cut(s) | 450 |
| BseNI | ACTGG | 1 cut(s) | 392 |
| BseRI | GAGGAG | 1 cut(s) | 212 |
| BseXI | GCAGC | 3 cut(s) | 56, 58, 317 |
| BshFI | GGCC | 1 cut(s) | 503 |
| BsiSI | CCGG | 2 cut(s) | 542, 574 |
| BslFI | GGGAC | 1 cut(s) | 180 |
| BsmAI | GTCTC | 1 cut(s) | 99 |
| BsmFI | GGGAC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 503 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 263 |
| BspACI | CCGC | 2 cut(s) | 119, 296 |
| BspANI | GGCC | 1 cut(s) | 503 |
| BspCNI | CTCAG | 1 cut(s) | 451 |
| BsrI | ACTGG | 1 cut(s) | 392 |
| Bst2UI | CCWGG | 1 cut(s) | 500 |
| Bst4CI | ACNGT | 1 cut(s) | 610 |
| BstC8I | GCNNGC | 1 cut(s) | 603 |
| BstDEI | CTNAG | 3 cut(s) | 263, 459, 615 |
| BstF5I | GGATG | 3 cut(s) | 432, 447, 527 |
| BstMAI | GTCTC | 1 cut(s) | 99 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 509 |
| BstNI | CCWGG | 1 cut(s) | 500 |
| BstSCI | CCNGG | 3 cut(s) | 498, 540, 572 |
| BstV1I | GCAGC | 3 cut(s) | 56, 58, 317 |
| BsuRI | GGCC | 1 cut(s) | 503 |
| BtsCI | GGATG | 3 cut(s) | 432, 447, 527 |
| BtsI | GCAGTG | 1 cut(s) | 267 |
| BtsIMutI | CAGTG | 1 cut(s) | 267 |
| Cac8I | GCNNGC | 1 cut(s) | 603 |
| Csp6I | GTAC | 2 cut(s) | 125, 577 |
| CviAII | CATG | 3 cut(s) | 152, 469, 598 |
| CviQI | GTAC | 2 cut(s) | 125, 577 |
| DdeI | CTNAG | 3 cut(s) | 263, 459, 615 |
| Eco147I | AGGCCT | 1 cut(s) | 503 |
| EcoRII | CCWGG | 1 cut(s) | 498 |
| EcoT22I | ATGCAT | 1 cut(s) | 369 |
| FaeI | CATG | 3 cut(s) | 155, 472, 601 |
| FaiI | YATR | 7 cut(s) | 153, 321, 326, 470, 485, 588, 599 |
| FaqI | GGGAC | 1 cut(s) | 180 |
| FatI | CATG | 3 cut(s) | 151, 468, 597 |
| Fnu4HI | GCNGC | 4 cut(s) | 47, 70, 120, 331 |
| FokI | GGATG | 3 cut(s) | 434, 439, 534 |
| Fsp4HI | GCNGC | 4 cut(s) | 47, 70, 120, 331 |
| FspBI | CTAG | 3 cut(s) | 128, 381, 509 |
| GluI | GCNGC | 4 cut(s) | 47, 70, 120, 331 |
| HaeIII | GGCC | 1 cut(s) | 503 |
| HapII | CCGG | 2 cut(s) | 542, 574 |
| Hin1II | CATG | 3 cut(s) | 155, 472, 601 |
| HinfI | GANTC | 3 cut(s) | 226, 418, 545 |
| HpaII | CCGG | 2 cut(s) | 542, 574 |
| HphI | GGTGA | 1 cut(s) | 193 |
| Hpy188I | TCNGA | 4 cut(s) | 9, 288, 409, 460 |
| Hpy188III | TCNNGA | 2 cut(s) | 107, 313 |
| HpyAV | CCTTC | 1 cut(s) | 228 |
| HpyCH4III | ACNGT | 1 cut(s) | 610 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 367, 447 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 509 |
| HpyF3I | CTNAG | 3 cut(s) | 263, 459, 615 |
| Hsp92II | CATG | 3 cut(s) | 155, 472, 601 |
| LpnPI | CCDG | 9 cut(s) | 27, 258, 290, 373, 455, 485, 512, 555, 587 |
| Lsp1109I | GCAGC | 3 cut(s) | 56, 58, 317 |
| LweI | GCATC | 3 cut(s) | 81, 376, 456 |
| MaeI | CTAG | 3 cut(s) | 128, 381, 509 |
| MaeIII | GTNAC | 1 cut(s) | 209 |
| MboII | GAAGA | 1 cut(s) | 427 |
| MfeI | CAATTG | 1 cut(s) | 35 |
| MluCI | AATT | 9 cut(s) | 35, 51, 113, 257, 282, 316, 345, 430, 560 |
| MlyI | GAGTC | 1 cut(s) | 539 |
| MmeI | TCCRAC | 2 cut(s) | 160, 227 |
| MnlI | CCTC | 7 cut(s) | 172, 190, 193, 243, 352, 454, 594 |
| Mph1103I | ATGCAT | 1 cut(s) | 369 |
| MroXI | GAANNNNTTC | 1 cut(s) | 225 |
| MseI | TTAA | 3 cut(s) | 54, 291, 495 |
| MspI | CCGG | 2 cut(s) | 542, 574 |
| MspR9I | CCNGG | 3 cut(s) | 500, 542, 574 |
| MunI | CAATTG | 1 cut(s) | 35 |
| MvaI | CCWGG | 1 cut(s) | 500 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 509 |
| NciI | CCSGG | 2 cut(s) | 542, 574 |
| NlaIII | CATG | 3 cut(s) | 155, 472, 601 |
| NsiI | ATGCAT | 1 cut(s) | 369 |
| PceI | AGGCCT | 1 cut(s) | 503 |
| PdmI | GAANNNNTTC | 1 cut(s) | 225 |
| PfeI | GAWTC | 2 cut(s) | 226, 418 |
| PkrI | GCNGC | 4 cut(s) | 48, 71, 121, 332 |
| PleI | GAGTC | 1 cut(s) | 539 |
| PpsI | GAGTC | 1 cut(s) | 539 |
| Psp6I | CCWGG | 1 cut(s) | 498 |
| PspGI | CCWGG | 1 cut(s) | 498 |
| RsaI | GTAC | 2 cut(s) | 126, 578 |
| RsaNI | GTAC | 2 cut(s) | 125, 577 |
| SaqAI | TTAA | 3 cut(s) | 54, 291, 495 |
| SatI | GCNGC | 4 cut(s) | 47, 70, 120, 331 |
| SchI | GAGTC | 1 cut(s) | 539 |
| ScrFI | CCNGG | 3 cut(s) | 500, 542, 574 |
| SetI | ASST | 7 cut(s) | 71, 133, 183, 188, 247, 332, 444 |
| SfaNI | GCATC | 3 cut(s) | 81, 376, 456 |
| Sse9I | AATT | 9 cut(s) | 35, 51, 113, 257, 282, 316, 345, 430, 560 |
| SseBI | AGGCCT | 1 cut(s) | 503 |
| SsiI | CCGC | 2 cut(s) | 119, 296 |
| SspMI | CTAG | 3 cut(s) | 128, 381, 509 |
| StuI | AGGCCT | 1 cut(s) | 503 |
| StyD4I | CCNGG | 3 cut(s) | 498, 540, 572 |
| TaaI | ACNGT | 1 cut(s) | 610 |
| TasI | AATT | 9 cut(s) | 35, 51, 113, 257, 282, 316, 345, 430, 560 |
| TatI | WGTACW | 1 cut(s) | 124 |
| TauI | GCSGC | 1 cut(s) | 122 |
| TfiI | GAWTC | 2 cut(s) | 226, 418 |
| Tru1I | TTAA | 3 cut(s) | 54, 291, 495 |
| Tru9I | TTAA | 3 cut(s) | 54, 291, 495 |
| TscAI | CASTG | 1 cut(s) | 274 |
| TseI | GCWGC | 3 cut(s) | 46, 69, 330 |
| TspDTI | ATGAA | 6 cut(s) | 14, 126, 234, 410, 443, 586 |
| TspGWI | ACGGA | 1 cut(s) | 605 |
| TspRI | CASTG | 1 cut(s) | 274 |
| XapI | RAATTY | 1 cut(s) | 282 |
| XmnI | GAANNNNTTC | 1 cut(s) | 225 |
| XspI | CTAG | 3 cut(s) | 128, 381, 509 |
| Zsp2I | ATGCAT | 1 cut(s) | 369 |