Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 80, 83 |
| AcoI | YGGCCR | 1 cut(s) | 58 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 393 |
| AgsI | TTSAA | 2 cut(s) | 128, 317 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 271, 303 |
| AluBI | AGCT | 2 cut(s) | 75, 108 |
| AluI | AGCT | 2 cut(s) | 75, 108 |
| Alw21I | GWGCWC | 1 cut(s) | 142 |
| Alw26I | GTCTC | 1 cut(s) | 199 |
| AoxI | GGCC | 2 cut(s) | 58, 363 |
| ApeKI | GCWGC | 2 cut(s) | 270, 492 |
| Bbv12I | GWGCWC | 1 cut(s) | 142 |
| BbvI | GCAGC | 2 cut(s) | 257, 479 |
| BccI | CCATC | 1 cut(s) | 411 |
| BceAI | ACGGC | 2 cut(s) | 45, 139 |
| BclI | TGATCA | 1 cut(s) | 197 |
| BcoDI | GTCTC | 1 cut(s) | 199 |
| BfaI | CTAG | 3 cut(s) | 180, 391, 502 |
| BisI | GCNGC | 3 cut(s) | 81, 271, 493 |
| BlsI | GCNGC | 3 cut(s) | 82, 272, 494 |
| BmsI | GCATC | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 2 cut(s) | 61, 133 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 97, 127 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 393 |
| Bse3DI | GCAATG | 1 cut(s) | 387 |
| BseDI | CCNNGG | 2 cut(s) | 61, 133 |
| BseGI | GGATG | 2 cut(s) | 335, 422 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 393 |
| BseMI | GCAATG | 1 cut(s) | 387 |
| BseXI | GCAGC | 2 cut(s) | 257, 479 |
| BseYI | CCCAGC | 1 cut(s) | 143 |
| BshFI | GGCC | 2 cut(s) | 60, 365 |
| BsiHKAI | GWGCWC | 1 cut(s) | 142 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 393 |
| BsmAI | GTCTC | 1 cut(s) | 199 |
| BsmI | GAATGC | 1 cut(s) | 134 |
| BsnI | GGCC | 2 cut(s) | 60, 365 |
| Bsp1286I | GDGCHC | 1 cut(s) | 142 |
| Bsp143I | GATC | 1 cut(s) | 197 |
| BspACI | CCGC | 2 cut(s) | 80, 83 |
| BspANI | GGCC | 2 cut(s) | 60, 365 |
| BsrDI | GCAATG | 1 cut(s) | 387 |
| BssECI | CCNNGG | 2 cut(s) | 61, 133 |
| BssMI | GATC | 1 cut(s) | 197 |
| BssT1I | CCWWGG | 1 cut(s) | 133 |
| Bst6I | CTCTTC | 1 cut(s) | 354 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 30 |
| BstDSI | CCRYGG | 1 cut(s) | 61 |
| BstF5I | GGATG | 2 cut(s) | 335, 422 |
| BstKTI | GATC | 1 cut(s) | 200 |
| BstMAI | GTCTC | 1 cut(s) | 199 |
| BstMBI | GATC | 1 cut(s) | 197 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 30, 498 |
| BstNSI | RCATGY | 2 cut(s) | 154, 179 |
| BstV1I | GCAGC | 2 cut(s) | 257, 479 |
| BsuRI | GGCC | 2 cut(s) | 60, 365 |
| BtgI | CCRYGG | 1 cut(s) | 61 |
| BtsCI | GGATG | 2 cut(s) | 335, 422 |
| BtsI | GCAGTG | 1 cut(s) | 352 |
| BtsIMutI | CAGTG | 1 cut(s) | 352 |
| CseI | GACGC | 1 cut(s) | 483 |
| CviAII | CATG | 2 cut(s) | 151, 176 |
| DpnI | GATC | 1 cut(s) | 199 |
| DpnII | GATC | 1 cut(s) | 197 |
| EaeI | YGGCCR | 1 cut(s) | 58 |
| Eam1104I | CTCTTC | 1 cut(s) | 354 |
| EarI | CTCTTC | 1 cut(s) | 354 |
| Eco130I | CCWWGG | 1 cut(s) | 133 |
| Eco147I | AGGCCT | 1 cut(s) | 365 |
| EcoT14I | CCWWGG | 1 cut(s) | 133 |
| ErhI | CCWWGG | 1 cut(s) | 133 |
| FaeI | CATG | 2 cut(s) | 154, 179 |
| FaiI | YATR | 9 cut(s) | 10, 101, 152, 177, 202, 219, 236, 285, 483 |
| FatI | CATG | 2 cut(s) | 150, 175 |
| FbaI | TGATCA | 1 cut(s) | 197 |
| Fnu4HI | GCNGC | 3 cut(s) | 81, 271, 493 |
| FokI | GGATG | 2 cut(s) | 322, 429 |
| Fsp4HI | GCNGC | 3 cut(s) | 81, 271, 493 |
| FspBI | CTAG | 3 cut(s) | 180, 391, 502 |
| GluI | GCNGC | 3 cut(s) | 81, 271, 493 |
| GsaI | CCCAGC | 1 cut(s) | 147 |
| HaeIII | GGCC | 2 cut(s) | 60, 365 |
| HgaI | GACGC | 1 cut(s) | 483 |
| Hin1II | CATG | 2 cut(s) | 154, 179 |
| Hpy166II | GTNNAC | 1 cut(s) | 166 |
| Hpy188I | TCNGA | 1 cut(s) | 94 |
| Hpy188III | TCNNGA | 2 cut(s) | 260, 467 |
| Hpy8I | GTNNAC | 1 cut(s) | 166 |
| Hpy99I | CGWCG | 1 cut(s) | 477 |
| HpyCH4IV | ACGT | 1 cut(s) | 168 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 30, 498 |
| HpySE526I | ACGT | 1 cut(s) | 168 |
| Hsp92II | CATG | 2 cut(s) | 154, 179 |
| Ksp22I | TGATCA | 1 cut(s) | 197 |
| Kzo9I | GATC | 1 cut(s) | 197 |
| LmnI | GCTCC | 3 cut(s) | 72, 105, 137 |
| LpnPI | CCDG | 5 cut(s) | 157, 245, 452, 463, 483 |
| Lsp1109I | GCAGC | 2 cut(s) | 257, 479 |
| LweI | GCATC | 1 cut(s) | 257 |
| MaeI | CTAG | 3 cut(s) | 180, 391, 502 |
| MaeII | ACGT | 1 cut(s) | 168 |
| MalI | GATC | 1 cut(s) | 199 |
| MboI | GATC | 1 cut(s) | 197 |
| MboII | GAAGA | 3 cut(s) | 203, 362, 371 |
| MhlI | GDGCHC | 1 cut(s) | 142 |
| MluCI | AATT | 1 cut(s) | 292 |
| MmeI | TCCRAC | 3 cut(s) | 16, 151, 302 |
| MnlI | CCTC | 6 cut(s) | 59, 127, 232, 355, 387, 441 |
| MseI | TTAA | 2 cut(s) | 16, 369 |
| Mva1269I | GAATGC | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 30, 498 |
| NdeII | GATC | 1 cut(s) | 197 |
| NlaIII | CATG | 2 cut(s) | 154, 179 |
| NspI | RCATGY | 2 cut(s) | 154, 179 |
| PceI | AGGCCT | 1 cut(s) | 365 |
| PctI | GAATGC | 1 cut(s) | 134 |
| PkrI | GCNGC | 3 cut(s) | 82, 272, 494 |
| PspFI | CCCAGC | 1 cut(s) | 143 |
| SaqAI | TTAA | 2 cut(s) | 16, 369 |
| SatI | GCNGC | 3 cut(s) | 81, 271, 493 |
| Sau3AI | GATC | 1 cut(s) | 197 |
| SduI | GDGCHC | 1 cut(s) | 142 |
| SetI | ASST | 6 cut(s) | 77, 110, 171, 284, 392, 398 |
| SfaNI | GCATC | 1 cut(s) | 257 |
| Sse9I | AATT | 1 cut(s) | 292 |
| SseBI | AGGCCT | 1 cut(s) | 365 |
| SsiI | CCGC | 2 cut(s) | 80, 83 |
| SspMI | CTAG | 3 cut(s) | 180, 391, 502 |
| StuI | AGGCCT | 1 cut(s) | 365 |
| StyI | CCWWGG | 1 cut(s) | 133 |
| TaiI | ACGT | 1 cut(s) | 171 |
| TasI | AATT | 1 cut(s) | 292 |
| TauI | GCSGC | 1 cut(s) | 83 |
| Tru1I | TTAA | 2 cut(s) | 16, 369 |
| Tru9I | TTAA | 2 cut(s) | 16, 369 |
| TscAI | CASTG | 1 cut(s) | 352 |
| TseI | GCWGC | 2 cut(s) | 270, 492 |
| TspGWI | ACGGA | 1 cut(s) | 447 |
| TspRI | CASTG | 1 cut(s) | 352 |
| XceI | RCATGY | 2 cut(s) | 154, 179 |
| XspI | CTAG | 3 cut(s) | 180, 391, 502 |