Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 249 |
| Acc16I | TGCGCA | 1 cut(s) | 290 |
| AccII | CGCG | 1 cut(s) | 347 |
| AcsI | RAATTY | 2 cut(s) | 168, 216 |
| AflIII | ACRYGT | 2 cut(s) | 223, 345 |
| AluBI | AGCT | 3 cut(s) | 23, 38, 200 |
| AluI | AGCT | 3 cut(s) | 23, 38, 200 |
| Alw26I | GTCTC | 1 cut(s) | 180 |
| AoxI | GGCC | 1 cut(s) | 42 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| ApoI | RAATTY | 2 cut(s) | 168, 216 |
| AspLEI | GCGC | 1 cut(s) | 291 |
| BbvCI | CCTCAGC | 1 cut(s) | 39 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BccI | CCATC | 2 cut(s) | 122, 319 |
| BcoDI | GTCTC | 1 cut(s) | 180 |
| BisI | GCNGC | 1 cut(s) | 126 |
| BlsI | GCNGC | 1 cut(s) | 127 |
| BmsI | GCATC | 1 cut(s) | 319 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 7, 39 |
| Bpu10I | CCTNAGC | 1 cut(s) | 39 |
| BseGI | GGATG | 2 cut(s) | 114, 334 |
| BseMII | CTCAG | 1 cut(s) | 30 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| Bsh1236I | CGCG | 1 cut(s) | 347 |
| BshFI | GGCC | 1 cut(s) | 44 |
| BsmAI | GTCTC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 44 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspANI | GGCC | 1 cut(s) | 44 |
| BspCNI | CTCAG | 1 cut(s) | 31 |
| BspFNI | CGCG | 1 cut(s) | 347 |
| BspQI | GCTCTTC | 1 cut(s) | 30 |
| BssMI | GATC | 1 cut(s) | 3 |
| Bst4CI | ACNGT | 1 cut(s) | 266 |
| Bst6I | CTCTTC | 2 cut(s) | 30, 150 |
| BstC8I | GCNNGC | 4 cut(s) | 198, 279, 283, 287 |
| BstDEI | CTNAG | 1 cut(s) | 39 |
| BstF5I | GGATG | 2 cut(s) | 114, 334 |
| BstFNI | CGCG | 1 cut(s) | 347 |
| BstHHI | GCGC | 1 cut(s) | 291 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMAI | GTCTC | 1 cut(s) | 180 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 50 |
| BstNSI | RCATGY | 1 cut(s) | 227 |
| BstUI | CGCG | 1 cut(s) | 347 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| BsuRI | GGCC | 1 cut(s) | 44 |
| BtsCI | GGATG | 2 cut(s) | 114, 334 |
| Cac8I | GCNNGC | 4 cut(s) | 198, 279, 283, 287 |
| CfoI | GCGC | 1 cut(s) | 291 |
| CviAII | CATG | 2 cut(s) | 224, 273 |
| CviJI | RGCY | 5 cut(s) | 23, 38, 44, 200, 285 |
| CviKI_1 | RGCY | 5 cut(s) | 23, 38, 44, 200, 285 |
| DdeI | CTNAG | 1 cut(s) | 39 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 30, 150 |
| EarI | CTCTTC | 2 cut(s) | 30, 150 |
| Eco147I | AGGCCT | 1 cut(s) | 44 |
| EcoRI | GAATTC | 2 cut(s) | 168, 216 |
| FaeI | CATG | 2 cut(s) | 227, 276 |
| FaiI | YATR | 9 cut(s) | 30, 75, 192, 194, 225, 249, 274, 351, 353 |
| FatI | CATG | 2 cut(s) | 223, 272 |
| Fnu4HI | GCNGC | 1 cut(s) | 126 |
| FokI | GGATG | 2 cut(s) | 101, 341 |
| Fsp4HI | GCNGC | 1 cut(s) | 126 |
| FspI | TGCGCA | 1 cut(s) | 290 |
| GlaI | GCGC | 1 cut(s) | 290 |
| GluI | GCNGC | 1 cut(s) | 126 |
| HaeIII | GGCC | 1 cut(s) | 44 |
| HhaI | GCGC | 1 cut(s) | 291 |
| Hin1II | CATG | 2 cut(s) | 227, 276 |
| Hin6I | GCGC | 1 cut(s) | 289 |
| HinP1I | GCGC | 1 cut(s) | 289 |
| HindIII | AAGCTT | 1 cut(s) | 198 |
| HinfI | GANTC | 2 cut(s) | 133, 339 |
| Hpy188I | TCNGA | 2 cut(s) | 258, 270 |
| Hpy188III | TCNNGA | 2 cut(s) | 173, 233 |
| Hpy99I | CGWCG | 1 cut(s) | 347 |
| HpyAV | CCTTC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 1 cut(s) | 266 |
| HpyCH4V | TGCA | 2 cut(s) | 196, 332 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 50 |
| HpyF3I | CTNAG | 1 cut(s) | 39 |
| Hsp92II | CATG | 2 cut(s) | 227, 276 |
| HspAI | GCGC | 1 cut(s) | 289 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LguI | GCTCTTC | 1 cut(s) | 30 |
| LpnPI | CCDG | 4 cut(s) | 39, 295, 299, 325 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| LweI | GCATC | 1 cut(s) | 319 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MboII | GAAGA | 3 cut(s) | 17, 167, 245 |
| MluCI | AATT | 3 cut(s) | 69, 168, 216 |
| MluI | ACGCGT | 1 cut(s) | 345 |
| MmeI | TCCRAC | 2 cut(s) | 62, 248 |
| MnlI | CCTC | 4 cut(s) | 34, 82, 139, 151 |
| MvnI | CGCG | 1 cut(s) | 347 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 50 |
| NdeII | GATC | 1 cut(s) | 3 |
| NlaIII | CATG | 2 cut(s) | 227, 276 |
| NsbI | TGCGCA | 1 cut(s) | 290 |
| NspI | RCATGY | 1 cut(s) | 227 |
| PceI | AGGCCT | 1 cut(s) | 44 |
| PciI | ACATGT | 1 cut(s) | 223 |
| PciSI | GCTCTTC | 1 cut(s) | 30 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 274 |
| PfeI | GAWTC | 2 cut(s) | 133, 339 |
| PkrI | GCNGC | 1 cut(s) | 127 |
| PscI | ACATGT | 1 cut(s) | 223 |
| PsiI | TTATAA | 1 cut(s) | 249 |
| SapI | GCTCTTC | 1 cut(s) | 30 |
| SatI | GCNGC | 1 cut(s) | 126 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| SetI | ASST | 5 cut(s) | 25, 40, 93, 162, 202 |
| SfaNI | GCATC | 1 cut(s) | 319 |
| Sse9I | AATT | 3 cut(s) | 69, 168, 216 |
| SseBI | AGGCCT | 1 cut(s) | 44 |
| StuI | AGGCCT | 1 cut(s) | 44 |
| TaaI | ACNGT | 1 cut(s) | 266 |
| TaqI | TCGA | 4 cut(s) | 136, 166, 220, 342 |
| TasI | AATT | 3 cut(s) | 69, 168, 216 |
| TfiI | GAWTC | 2 cut(s) | 133, 339 |
| TseI | GCWGC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 3 cut(s) | 17, 48, 62 |
| XapI | RAATTY | 2 cut(s) | 168, 216 |
| XceI | RCATGY | 1 cut(s) | 227 |