Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-RVT | PF13966 | 64 - 122 | 2.5e-13 | zinc-binding in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 555 |
| AclWI | GGATC | 1 cut(s) | 24 |
| AcoI | YGGCCR | 1 cut(s) | 164 |
| AcsI | RAATTY | 1 cut(s) | 252 |
| AfaI | GTAC | 4 cut(s) | 145, 210, 393, 610 |
| AflII | CTTAAG | 1 cut(s) | 530 |
| AgsI | TTSAA | 1 cut(s) | 355 |
| AhlI | ACTAGT | 1 cut(s) | 338 |
| Alw21I | GWGCWC | 1 cut(s) | 390 |
| Alw26I | GTCTC | 2 cut(s) | 66, 329 |
| Alw44I | GTGCAC | 1 cut(s) | 386 |
| AlwI | GGATC | 1 cut(s) | 24 |
| Ama87I | CYCGRG | 1 cut(s) | 180 |
| AoxI | GGCC | 2 cut(s) | 164, 435 |
| ApaLI | GTGCAC | 1 cut(s) | 386 |
| ApoI | RAATTY | 1 cut(s) | 252 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 289 |
| AspA2I | CCTAGG | 1 cut(s) | 488 |
| AspS9I | GGNCC | 1 cut(s) | 435 |
| AsuHPI | GGTGA | 1 cut(s) | 311 |
| AsuNHI | GCTAGC | 1 cut(s) | 686 |
| AvaI | CYCGRG | 1 cut(s) | 180 |
| AvrII | CCTAGG | 1 cut(s) | 488 |
| BaeGI | GKGCMC | 1 cut(s) | 390 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 600, 633 |
| BalI | TGGCCA | 1 cut(s) | 166 |
| BbsI | GAAGAC | 1 cut(s) | 305 |
| Bbv12I | GWGCWC | 1 cut(s) | 390 |
| BbvCI | CCTCAGC | 1 cut(s) | 672 |
| BccI | CCATC | 2 cut(s) | 296, 539 |
| BcoDI | GTCTC | 2 cut(s) | 66, 329 |
| BcuI | ACTAGT | 1 cut(s) | 338 |
| BfaI | CTAG | 6 cut(s) | 20, 65, 74, 339, 489, 687 |
| BfmI | CTRYAG | 1 cut(s) | 692 |
| BfrI | CTTAAG | 1 cut(s) | 530 |
| BlnI | CCTAGG | 1 cut(s) | 488 |
| BlpI | GCTNAGC | 1 cut(s) | 652 |
| BmeT110I | CYCGRG | 1 cut(s) | 180 |
| BmgT120I | GGNCC | 1 cut(s) | 435 |
| BmrI | ACTGGG | 1 cut(s) | 576 |
| BmtI | GCTAGC | 1 cut(s) | 690 |
| BmuI | ACTGGG | 1 cut(s) | 576 |
| BpiI | GAAGAC | 1 cut(s) | 305 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 46, 78 |
| Bpu10I | CCTNAGC | 1 cut(s) | 672 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 652 |
| Bsa29I | ATCGAT | 2 cut(s) | 39, 561 |
| BsaAI | YACGTR | 1 cut(s) | 391 |
| BsaBI | GATNNNNATC | 1 cut(s) | 701 |
| BsaI | GGTCTC | 1 cut(s) | 66 |
| BsaJI | CCNNGG | 2 cut(s) | 488, 709 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bse1I | ACTGG | 1 cut(s) | 571 |
| Bse3DI | GCAATG | 1 cut(s) | 507 |
| Bse8I | GATNNNNATC | 1 cut(s) | 701 |
| BseCI | ATCGAT | 2 cut(s) | 39, 561 |
| BseDI | CCNNGG | 2 cut(s) | 488, 709 |
| BseJI | GATNNNNATC | 1 cut(s) | 701 |
| BseMI | GCAATG | 1 cut(s) | 507 |
| BseMII | CTCAG | 4 cut(s) | 324, 661, 663, 666 |
| BseNI | ACTGG | 1 cut(s) | 571 |
| BseRI | GAGGAG | 2 cut(s) | 110, 461 |
| BseSI | GKGCMC | 1 cut(s) | 390 |
| BshFI | GGCC | 2 cut(s) | 166, 437 |
| BshVI | ATCGAT | 2 cut(s) | 39, 561 |
| BsiHKAI | GWGCWC | 1 cut(s) | 390 |
| BsiHKCI | CYCGRG | 1 cut(s) | 180 |
| BsmAI | GTCTC | 2 cut(s) | 66, 329 |
| BsnI | GGCC | 2 cut(s) | 166, 437 |
| Bso31I | GGTCTC | 1 cut(s) | 66 |
| BsoBI | CYCGRG | 1 cut(s) | 180 |
| Bsp1286I | GDGCHC | 1 cut(s) | 390 |
| Bsp1407I | TGTACA | 1 cut(s) | 208 |
| Bsp143I | GATC | 1 cut(s) | 16 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 652 |
| BspANI | GGCC | 2 cut(s) | 166, 437 |
| BspCNI | CTCAG | 4 cut(s) | 325, 660, 664, 665 |
| BspDI | ATCGAT | 2 cut(s) | 39, 561 |
| BspOI | GCTAGC | 1 cut(s) | 690 |
| BspPI | GGATC | 1 cut(s) | 24 |
| BspQI | GCTCTTC | 1 cut(s) | 663 |
| BspTI | CTTAAG | 1 cut(s) | 530 |
| BspTNI | GGTCTC | 1 cut(s) | 66 |
| BsrDI | GCAATG | 1 cut(s) | 507 |
| BsrGI | TGTACA | 1 cut(s) | 208 |
| BsrI | ACTGG | 1 cut(s) | 571 |
| BssECI | CCNNGG | 2 cut(s) | 488, 709 |
| BssMI | GATC | 1 cut(s) | 16 |
| BssT1I | CCWWGG | 2 cut(s) | 488, 709 |
| Bst6I | CTCTTC | 1 cut(s) | 663 |
| BstAFI | CTTAAG | 1 cut(s) | 530 |
| BstAUI | TGTACA | 1 cut(s) | 208 |
| BstBAI | YACGTR | 1 cut(s) | 391 |
| BstC8I | GCNNGC | 2 cut(s) | 118, 688 |
| BstDEI | CTNAG | 4 cut(s) | 333, 647, 652, 672 |
| BstKTI | GATC | 1 cut(s) | 19 |
| BstMAI | GTCTC | 2 cut(s) | 66, 329 |
| BstMBI | GATC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 683 |
| BstNSI | RCATGY | 2 cut(s) | 497, 681 |
| BstSFI | CTRYAG | 1 cut(s) | 692 |
| BstSLI | GKGCMC | 1 cut(s) | 390 |
| BstV2I | GAAGAC | 1 cut(s) | 305 |
| BstX2I | RGATCY | 1 cut(s) | 16 |
| BstYI | RGATCY | 1 cut(s) | 16 |
| Bsu15I | ATCGAT | 2 cut(s) | 39, 561 |
| BsuRI | GGCC | 2 cut(s) | 166, 437 |
| BsuTUI | ATCGAT | 2 cut(s) | 39, 561 |
| Cac8I | GCNNGC | 2 cut(s) | 118, 688 |
| Cfr13I | GGNCC | 1 cut(s) | 435 |
| ClaI | ATCGAT | 2 cut(s) | 39, 561 |
| Csp6I | GTAC | 4 cut(s) | 144, 209, 392, 609 |
| CviAII | CATG | 5 cut(s) | 234, 322, 494, 624, 678 |
| CviQI | GTAC | 4 cut(s) | 144, 209, 392, 609 |
| DdeI | CTNAG | 4 cut(s) | 333, 647, 652, 672 |
| DpnI | GATC | 1 cut(s) | 18 |
| DpnII | GATC | 1 cut(s) | 16 |
| EaeI | YGGCCR | 1 cut(s) | 164 |
| Eam1104I | CTCTTC | 1 cut(s) | 663 |
| EarI | CTCTTC | 1 cut(s) | 663 |
| Eco130I | CCWWGG | 2 cut(s) | 488, 709 |
| Eco31I | GGTCTC | 1 cut(s) | 66 |
| Eco88I | CYCGRG | 1 cut(s) | 180 |
| EcoT14I | CCWWGG | 2 cut(s) | 488, 709 |
| ErhI | CCWWGG | 2 cut(s) | 488, 709 |
| FaeI | CATG | 5 cut(s) | 237, 325, 497, 627, 681 |
| FatI | CATG | 5 cut(s) | 233, 321, 493, 623, 677 |
| FspBI | CTAG | 6 cut(s) | 20, 65, 74, 339, 489, 687 |
| HaeIII | GGCC | 2 cut(s) | 166, 437 |
| Hin1II | CATG | 5 cut(s) | 237, 325, 497, 627, 681 |
| HindIII | AAGCTT | 1 cut(s) | 478 |
| HinfI | GANTC | 1 cut(s) | 47 |
| HphI | GGTGA | 1 cut(s) | 311 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 388 |
| Hpy188I | TCNGA | 2 cut(s) | 54, 224 |
| Hpy188III | TCNNGA | 1 cut(s) | 65 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 388 |
| HpyAV | CCTTC | 3 cut(s) | 193, 279, 371 |
| HpyCH4IV | ACGT | 1 cut(s) | 390 |
| HpyCH4V | TGCA | 4 cut(s) | 174, 233, 321, 388 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 683 |
| HpyF3I | CTNAG | 4 cut(s) | 333, 647, 652, 672 |
| HpySE526I | ACGT | 1 cut(s) | 390 |
| Hsp92II | CATG | 5 cut(s) | 237, 325, 497, 627, 681 |
| Kzo9I | GATC | 1 cut(s) | 16 |
| LguI | GCTCTTC | 1 cut(s) | 663 |
| LmnI | GCTCC | 1 cut(s) | 54 |
| LpnPI | CCDG | 5 cut(s) | 43, 148, 345, 442, 552 |
| MaeI | CTAG | 6 cut(s) | 20, 65, 74, 339, 489, 687 |
| MaeII | ACGT | 1 cut(s) | 390 |
| MalI | GATC | 1 cut(s) | 18 |
| MboI | GATC | 1 cut(s) | 16 |
| MboII | GAAGA | 6 cut(s) | 89, 148, 248, 305, 416, 650 |
| MflI | RGATCY | 1 cut(s) | 16 |
| MhlI | GDGCHC | 1 cut(s) | 390 |
| MlsI | TGGCCA | 1 cut(s) | 166 |
| MluCI | AATT | 3 cut(s) | 80, 252, 538 |
| MluNI | TGGCCA | 1 cut(s) | 166 |
| MmeI | TCCRAC | 1 cut(s) | 354 |
| Mox20I | TGGCCA | 1 cut(s) | 166 |
| MroXI | GAANNNNTTC | 1 cut(s) | 289 |
| MscI | TGGCCA | 1 cut(s) | 166 |
| MseI | TTAA | 3 cut(s) | 483, 531, 594 |
| Msp20I | TGGCCA | 1 cut(s) | 166 |
| MspCI | CTTAAG | 1 cut(s) | 530 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 683 |
| NdeII | GATC | 1 cut(s) | 16 |
| NheI | GCTAGC | 1 cut(s) | 686 |
| NlaIII | CATG | 5 cut(s) | 237, 325, 497, 627, 681 |
| NspI | RCATGY | 2 cut(s) | 497, 681 |
| PciSI | GCTCTTC | 1 cut(s) | 663 |
| PdmI | GAANNNNTTC | 1 cut(s) | 289 |
| PfeI | GAWTC | 1 cut(s) | 47 |
| Ppu21I | YACGTR | 1 cut(s) | 391 |
| PsiI | TTATAA | 1 cut(s) | 555 |
| PspPI | GGNCC | 1 cut(s) | 435 |
| PsuI | RGATCY | 1 cut(s) | 16 |
| RsaI | GTAC | 4 cut(s) | 145, 210, 393, 610 |
| RsaNI | GTAC | 4 cut(s) | 144, 209, 392, 609 |
| SapI | GCTCTTC | 1 cut(s) | 663 |
| SaqAI | TTAA | 3 cut(s) | 483, 531, 594 |
| Sau3AI | GATC | 1 cut(s) | 16 |
| Sau96I | GGNCC | 1 cut(s) | 435 |
| SduI | GDGCHC | 1 cut(s) | 390 |
| SfcI | CTRYAG | 1 cut(s) | 692 |
| SmlI | CTYRAG | 1 cut(s) | 530 |
| SmoI | CTYRAG | 1 cut(s) | 530 |
| SpeI | ACTAGT | 1 cut(s) | 338 |
| Sse9I | AATT | 3 cut(s) | 80, 252, 538 |
| SspMI | CTAG | 6 cut(s) | 20, 65, 74, 339, 489, 687 |
| StyI | CCWWGG | 2 cut(s) | 488, 709 |
| TaiI | ACGT | 1 cut(s) | 393 |
| TaqI | TCGA | 3 cut(s) | 39, 561, 705 |
| TasI | AATT | 3 cut(s) | 80, 252, 538 |
| TatI | WGTACW | 1 cut(s) | 208 |
| TfiI | GAWTC | 1 cut(s) | 47 |
| Tru1I | TTAA | 3 cut(s) | 483, 531, 594 |
| Tru9I | TTAA | 3 cut(s) | 483, 531, 594 |
| TspDTI | ATGAA | 3 cut(s) | 335, 527, 650 |
| Vha464I | CTTAAG | 1 cut(s) | 530 |
| VneI | GTGCAC | 1 cut(s) | 386 |
| XapI | RAATTY | 1 cut(s) | 252 |
| XbaI | TCTAGA | 1 cut(s) | 64 |
| XceI | RCATGY | 2 cut(s) | 497, 681 |
| XmaJI | CCTAGG | 1 cut(s) | 488 |
| XmnI | GAANNNNTTC | 1 cut(s) | 289 |
| XspI | CTAG | 6 cut(s) | 20, 65, 74, 339, 489, 687 |