Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 411, 428 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 378 |
| AgsI | TTSAA | 1 cut(s) | 427 |
| AjnI | CCWGG | 2 cut(s) | 102, 371 |
| AluBI | AGCT | 5 cut(s) | 224, 242, 293, 314, 421 |
| AluI | AGCT | 5 cut(s) | 224, 242, 293, 314, 421 |
| Alw26I | GTCTC | 1 cut(s) | 520 |
| ApeKI | GCWGC | 4 cut(s) | 23, 221, 242, 314 |
| ApoI | RAATTY | 2 cut(s) | 411, 428 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 361 |
| AspS9I | GGNCC | 1 cut(s) | 100 |
| AsuHPI | GGTGA | 1 cut(s) | 46 |
| AvaII | GGWCC | 1 cut(s) | 100 |
| BbsI | GAAGAC | 2 cut(s) | 145, 162 |
| BbvI | GCAGC | 4 cut(s) | 35, 229, 233, 301 |
| BccI | CCATC | 1 cut(s) | 139 |
| BciT130I | CCWGG | 2 cut(s) | 104, 373 |
| BcoDI | GTCTC | 1 cut(s) | 520 |
| BfaI | CTAG | 1 cut(s) | 526 |
| BfmI | CTRYAG | 1 cut(s) | 28 |
| BisI | GCNGC | 4 cut(s) | 24, 222, 243, 315 |
| BlsI | GCNGC | 4 cut(s) | 25, 223, 244, 316 |
| Bme1390I | CCNGG | 2 cut(s) | 104, 373 |
| Bme18I | GGWCC | 1 cut(s) | 100 |
| BmgT120I | GGNCC | 1 cut(s) | 100 |
| BmiI | GGNNCC | 2 cut(s) | 101, 280 |
| BmrFI | CCNGG | 2 cut(s) | 104, 373 |
| BmsI | GCATC | 2 cut(s) | 199, 377 |
| BpiI | GAAGAC | 2 cut(s) | 145, 162 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 110, 142 |
| BsaJI | CCNNGG | 1 cut(s) | 477 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 378 |
| BseBI | CCWGG | 2 cut(s) | 104, 373 |
| BseDI | CCNNGG | 1 cut(s) | 477 |
| BseGI | GGATG | 2 cut(s) | 368, 472 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 378 |
| BseRI | GAGGAG | 2 cut(s) | 56, 453 |
| BseXI | GCAGC | 4 cut(s) | 35, 229, 233, 301 |
| BseYI | CCCAGC | 1 cut(s) | 289 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 378 |
| BsmAI | GTCTC | 1 cut(s) | 520 |
| Bsp143I | GATC | 1 cut(s) | 396 |
| BspLI | GGNNCC | 2 cut(s) | 101, 280 |
| BspMAI | CTGCAG | 1 cut(s) | 32 |
| BssECI | CCNNGG | 1 cut(s) | 477 |
| BssMI | GATC | 1 cut(s) | 396 |
| BssT1I | CCWWGG | 1 cut(s) | 477 |
| Bst2UI | CCWGG | 2 cut(s) | 104, 373 |
| Bst4CI | ACNGT | 2 cut(s) | 80, 88 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 232 |
| BstF5I | GGATG | 2 cut(s) | 368, 472 |
| BstKTI | GATC | 1 cut(s) | 399 |
| BstMAI | GTCTC | 1 cut(s) | 520 |
| BstMBI | GATC | 1 cut(s) | 396 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 20, 218, 242 |
| BstNI | CCWGG | 2 cut(s) | 104, 373 |
| BstSCI | CCNGG | 2 cut(s) | 102, 371 |
| BstSFI | CTRYAG | 1 cut(s) | 28 |
| BstV1I | GCAGC | 4 cut(s) | 35, 229, 233, 301 |
| BstV2I | GAAGAC | 2 cut(s) | 145, 162 |
| BtsCI | GGATG | 2 cut(s) | 368, 472 |
| BtsI | GCAGTG | 1 cut(s) | 21 |
| BtsIMutI | CAGTG | 1 cut(s) | 21 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| Cfr13I | GGNCC | 1 cut(s) | 100 |
| CviAII | CATG | 1 cut(s) | 512 |
| CviJI | RGCY | 8 cut(s) | 26, 224, 236, 242, 293, 314, 421, 462 |
| CviKI_1 | RGCY | 8 cut(s) | 26, 224, 236, 242, 293, 314, 421, 462 |
| DdeI | CTNAG | 1 cut(s) | 232 |
| DpnI | GATC | 1 cut(s) | 398 |
| DpnII | GATC | 1 cut(s) | 396 |
| Eco130I | CCWWGG | 1 cut(s) | 477 |
| Eco47I | GGWCC | 1 cut(s) | 100 |
| EcoRII | CCWGG | 2 cut(s) | 102, 371 |
| EcoT14I | CCWWGG | 1 cut(s) | 477 |
| ErhI | CCWWGG | 1 cut(s) | 477 |
| FaeI | CATG | 1 cut(s) | 515 |
| FaiI | YATR | 5 cut(s) | 198, 228, 267, 434, 513 |
| FatI | CATG | 1 cut(s) | 511 |
| Fnu4HI | GCNGC | 4 cut(s) | 24, 222, 243, 315 |
| FokI | GGATG | 2 cut(s) | 355, 459 |
| Fsp4HI | GCNGC | 4 cut(s) | 24, 222, 243, 315 |
| FspBI | CTAG | 1 cut(s) | 526 |
| GluI | GCNGC | 4 cut(s) | 24, 222, 243, 315 |
| GsaI | CCCAGC | 1 cut(s) | 293 |
| Hin1II | CATG | 1 cut(s) | 515 |
| HinfI | GANTC | 2 cut(s) | 71, 469 |
| HphI | GGTGA | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 2 cut(s) | 76, 256 |
| Hpy188III | TCNNGA | 2 cut(s) | 127, 400 |
| HpyAV | CCTTC | 3 cut(s) | 189, 269, 300 |
| HpyCH4III | ACNGT | 2 cut(s) | 80, 88 |
| HpyCH4V | TGCA | 3 cut(s) | 30, 368, 448 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 20, 218, 242 |
| HpyF3I | CTNAG | 1 cut(s) | 232 |
| Hsp92II | CATG | 1 cut(s) | 515 |
| Kzo9I | GATC | 1 cut(s) | 396 |
| LmnI | GCTCC | 1 cut(s) | 418 |
| LpnPI | CCDG | 7 cut(s) | 40, 89, 116, 303, 358, 363, 385 |
| Lsp1109I | GCAGC | 4 cut(s) | 35, 229, 233, 301 |
| LweI | GCATC | 2 cut(s) | 199, 377 |
| MaeI | CTAG | 1 cut(s) | 526 |
| MaeIII | GTNAC | 2 cut(s) | 299, 381 |
| MalI | GATC | 1 cut(s) | 398 |
| MboI | GATC | 1 cut(s) | 396 |
| MboII | GAAGA | 5 cut(s) | 119, 150, 162, 174, 419 |
| MluCI | AATT | 3 cut(s) | 131, 411, 428 |
| MlyI | GAGTC | 2 cut(s) | 80, 463 |
| MmeI | TCCRAC | 2 cut(s) | 54, 432 |
| MnlI | CCTC | 8 cut(s) | 12, 34, 112, 142, 332, 338, 431, 448 |
| MroXI | GAANNNNTTC | 1 cut(s) | 361 |
| MspA1I | CMGCKG | 1 cut(s) | 314 |
| MspR9I | CCNGG | 2 cut(s) | 104, 373 |
| MvaI | CCWGG | 2 cut(s) | 104, 373 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 20, 218, 242 |
| NdeII | GATC | 1 cut(s) | 396 |
| NlaIII | CATG | 1 cut(s) | 515 |
| NlaIV | GGNNCC | 2 cut(s) | 101, 280 |
| NmuCI | GTSAC | 1 cut(s) | 381 |
| PdmI | GAANNNNTTC | 1 cut(s) | 361 |
| PfoI | TCCNGGA | 1 cut(s) | 102 |
| PkrI | GCNGC | 4 cut(s) | 25, 223, 244, 316 |
| PleI | GAGTC | 2 cut(s) | 79, 463 |
| PpsI | GAGTC | 2 cut(s) | 79, 463 |
| Psp6I | CCWGG | 2 cut(s) | 102, 371 |
| PspFI | CCCAGC | 1 cut(s) | 289 |
| PspGI | CCWGG | 2 cut(s) | 102, 371 |
| PspN4I | GGNNCC | 2 cut(s) | 101, 280 |
| PspPI | GGNCC | 1 cut(s) | 100 |
| PstI | CTGCAG | 1 cut(s) | 32 |
| PvuII | CAGCTG | 1 cut(s) | 314 |
| SatI | GCNGC | 4 cut(s) | 24, 222, 243, 315 |
| Sau3AI | GATC | 1 cut(s) | 396 |
| Sau96I | GGNCC | 1 cut(s) | 100 |
| SchI | GAGTC | 2 cut(s) | 80, 463 |
| ScrFI | CCNGG | 2 cut(s) | 104, 373 |
| SetI | ASST | 9 cut(s) | 161, 226, 244, 280, 295, 316, 377, 423, 459 |
| SfaNI | GCATC | 2 cut(s) | 199, 377 |
| SfcI | CTRYAG | 1 cut(s) | 28 |
| SinI | GGWCC | 1 cut(s) | 100 |
| Sse9I | AATT | 3 cut(s) | 131, 411, 428 |
| SspMI | CTAG | 1 cut(s) | 526 |
| StyD4I | CCNGG | 2 cut(s) | 102, 371 |
| StyI | CCWWGG | 1 cut(s) | 477 |
| TaaI | ACNGT | 2 cut(s) | 80, 88 |
| TaqI | TCGA | 3 cut(s) | 128, 399, 467 |
| TasI | AATT | 3 cut(s) | 131, 411, 428 |
| TscAI | CASTG | 1 cut(s) | 21 |
| TseFI | GTSAC | 1 cut(s) | 381 |
| TseI | GCWGC | 4 cut(s) | 23, 221, 242, 314 |
| Tsp45I | GTSAC | 1 cut(s) | 381 |
| TspDTI | ATGAA | 2 cut(s) | 126, 251 |
| TspRI | CASTG | 1 cut(s) | 21 |
| VpaK11BI | GGWCC | 1 cut(s) | 100 |
| XapI | RAATTY | 2 cut(s) | 411, 428 |
| XmnI | GAANNNNTTC | 1 cut(s) | 361 |
| XspI | CTAG | 1 cut(s) | 526 |