zinc-binding in reverse transcriptase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_long | PF17177 | 102 - 230 | 1.9e-06 | Pentacotripeptide-repeat region of PRORP |
| PPR_3 | PF13812 | 163 - 212 | 3.6e-08 | Pentatricopeptide repeat domain |
| PPR_1 | PF12854 | 200 - 230 | 1.1e-11 | PPR repeat |
| PPR_2 | PF13041 | 202 - 242 | 8.3e-12 | PPR repeat family |
| PPR | PF01535 | 206 - 233 | 6.9e-08 | PPR repeat |
| PPR_3 | PF13812 | 207 - 249 | 8.6e-06 | Pentatricopeptide repeat domain |
| PPR_1 | PF12854 | 236 - 266 | 4.5e-10 | PPR repeat |
| PPR_2 | PF13041 | 237 - 286 | 4e-18 | PPR repeat family |
| PPR | PF01535 | 240 - 268 | 7.3e-08 | PPR repeat |
| PPR_3 | PF13812 | 263 - 315 | 5.5e-07 | Pentatricopeptide repeat domain |
| PPR_1 | PF12854 | 270 - 301 | 2.2e-12 | PPR repeat |
| PPR_2 | PF13041 | 273 - 319 | 4.1e-18 | PPR repeat family |
| PPR | PF01535 | 275 - 305 | 2.2e-09 | PPR repeat |
| PPR_long | PF17177 | 322 - 455 | 1.6e-12 | Pentacotripeptide-repeat region of PRORP |
| PPR_3 | PF13812 | 331 - 389 | 5.2e-08 | Pentatricopeptide repeat domain |
| TPR_24 | PF23276 | 347 - 458 | 3.5e-07 | Fungal tetratrico peptide repeats |
| PPR_1 | PF12854 | 374 - 406 | 3.9e-09 | PPR repeat |
| PPR_2 | PF13041 | 377 - 425 | 2e-13 | PPR repeat family |
| PPR_3 | PF13812 | 402 - 460 | 1.8e-14 | Pentatricopeptide repeat domain |
| PPR_1 | PF12854 | 408 - 441 | 2.6e-07 | PPR repeat |
| PPR_2 | PF13041 | 415 - 459 | 4.9e-13 | PPR repeat family |
| PPR_long | PF17177 | 437 - 533 | 6.5e-06 | Pentacotripeptide-repeat region of PRORP |
| PPR_2 | PF13041 | 447 - 496 | 1.5e-13 | PPR repeat family |
| PPR_1 | PF12854 | 480 - 510 | 3.1e-08 | PPR repeat |
| PPR_2 | PF13041 | 482 - 528 | 2e-09 | PPR repeat family |
| PPR_3 | PF13812 | 507 - 562 | 1.2e-12 | Pentatricopeptide repeat domain |
| PPR_1 | PF12854 | 513 - 545 | 2.9e-08 | PPR repeat |
| PPR_2 | PF13041 | 517 - 566 | 1.2e-15 | PPR repeat family |
| PPR_long | PF17177 | 518 - 631 | 1.5e-09 | Pentacotripeptide-repeat region of PRORP |
| TPR_24 | PF23276 | 522 - 614 | 1.5e-07 | Fungal tetratrico peptide repeats |
| PPR_1 | PF12854 | 548 - 575 | 5.6e-08 | PPR repeat |
| PPR_2 | PF13041 | 552 - 600 | 4.7e-12 | PPR repeat family |
| PPR_3 | PF13812 | 582 - 634 | 4.5e-08 | Pentatricopeptide repeat domain |
| PPR_2 | PF13041 | 587 - 636 | 4.4e-11 | PPR repeat family |
| TPR_24 | PF23276 | 638 - 753 | 1.5e-07 | Fungal tetratrico peptide repeats |
| PPR_1 | PF12854 | 652 - 685 | 2.6e-06 | PPR repeat |
| PPR_2 | PF13041 | 656 - 700 | 5e-11 | PPR repeat family |
| PPR | PF01535 | 660 - 686 | 1.7e-06 | PPR repeat |
| PPR_3 | PF13812 | 682 - 736 | 6.3e-06 | Pentatricopeptide repeat domain |
| PPR_2 | PF13041 | 693 - 739 | 7.9e-10 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 621, 831, 1472 |
| Acc16I | TGCGCA | 1 cut(s) | 1390 |
| Acc36I | ACCTGC | 1 cut(s) | 2322 |
| AccBSI | CCGCTC | 1 cut(s) | 275 |
| AccI | GTMKAC | 3 cut(s) | 940, 1034, 1171 |
| AccII | CGCG | 1 cut(s) | 12 |
| AciI | CCGC | 8 cut(s) | 148, 189, 273, 524, 533, 536, 1088, 1298 |
| AclWI | GGATC | 3 cut(s) | 70, 807, 1031 |
| AcoI | YGGCCR | 2 cut(s) | 396, 497 |
| AcsI | RAATTY | 2 cut(s) | 1268, 1342 |
| AcuI | CTGAAG | 2 cut(s) | 1740, 2215 |
| AdeI | CACNNNGTG | 1 cut(s) | 318 |
| AfaI | GTAC | 4 cut(s) | 79, 515, 1311, 2252 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 172, 2323, 2326 |
| AflIII | ACRYGT | 1 cut(s) | 729 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1763 |
| AjnI | CCWGG | 2 cut(s) | 1007, 2346 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 872, 904 |
| Alw21I | GWGCWC | 1 cut(s) | 323 |
| Alw26I | GTCTC | 8 cut(s) | 19, 39, 1271, 1343, 1489, 1518, 1737, 2293 |
| Alw44I | GTGCAC | 1 cut(s) | 319 |
| AlwI | GGATC | 3 cut(s) | 70, 807, 1031 |
| AoxI | GGCC | 7 cut(s) | 175, 396, 497, 1232, 1534, 2314, 2343 |
| ApaLI | GTGCAC | 1 cut(s) | 319 |
| ApeKI | GCWGC | 1 cut(s) | 412 |
| ApoI | RAATTY | 2 cut(s) | 1268, 1342 |
| AseI | ATTAAT | 2 cut(s) | 1109, 1368 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 611, 677 |
| AspLEI | GCGC | 3 cut(s) | 12, 1391, 2240 |
| AspS9I | GGNCC | 3 cut(s) | 175, 2140, 2344 |
| AsuHPI | GGTGA | 6 cut(s) | 219, 550, 770, 835, 980, 1168 |
| AsuII | TTCGAA | 1 cut(s) | 434 |
| AvaII | GGWCC | 1 cut(s) | 2140 |
| BaeGI | GKGCMC | 2 cut(s) | 323, 2109 |
| BalI | TGGCCA | 1 cut(s) | 398 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1497, 1529 |
| BauI | CACGAG | 1 cut(s) | 1221 |
| BbsI | GAAGAC | 1 cut(s) | 1425 |
| Bbv12I | GWGCWC | 1 cut(s) | 323 |
| BbvI | GCAGC | 1 cut(s) | 399 |
| BceAI | ACGGC | 2 cut(s) | 330, 532 |
| BciT130I | CCWGG | 2 cut(s) | 1009, 2348 |
| BclI | TGATCA | 1 cut(s) | 973 |
| BcoDI | GTCTC | 8 cut(s) | 19, 39, 1271, 1343, 1489, 1518, 1737, 2293 |
| BfaI | CTAG | 1 cut(s) | 416 |
| BfmI | CTRYAG | 1 cut(s) | 1590 |
| BfuAI | ACCTGC | 1 cut(s) | 2322 |
| BisI | GCNGC | 2 cut(s) | 413, 534 |
| BlsI | GCNGC | 2 cut(s) | 414, 535 |
| Bme1390I | CCNGG | 2 cut(s) | 1009, 2348 |
| Bme18I | GGWCC | 1 cut(s) | 2140 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1763 |
| BmgT120I | GGNCC | 3 cut(s) | 175, 2140, 2344 |
| BmiI | GGNNCC | 1 cut(s) | 1465 |
| BmrFI | CCNGG | 2 cut(s) | 1009, 2348 |
| BmsI | GCATC | 6 cut(s) | 324, 655, 1251, 1600, 1866, 2395 |
| BoxI | GACNNNNGTC | 1 cut(s) | 384 |
| BpiI | GAAGAC | 1 cut(s) | 1425 |
| Bpu14I | TTCGAA | 1 cut(s) | 434 |
| BpuEI | CTTGAG | 1 cut(s) | 476 |
| Bsa29I | ATCGAT | 1 cut(s) | 738 |
| BsaAI | YACGTR | 3 cut(s) | 513, 2177, 2190 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaJI | CCNNGG | 5 cut(s) | 58, 1537, 1996, 2346, 2421 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 248, 278, 758, 788, 2318, 2348 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 172, 2323, 2326 |
| Bse1I | ACTGG | 3 cut(s) | 1123, 2265, 2317 |
| Bse3DI | GCAATG | 1 cut(s) | 2305 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 2 cut(s) | 1009, 2348 |
| BseCI | ATCGAT | 1 cut(s) | 738 |
| BseDI | CCNNGG | 5 cut(s) | 58, 1537, 1996, 2346, 2421 |
| BseGI | GGATG | 9 cut(s) | 670, 798, 928, 1495, 1713, 1882, 1904, 1992, 2389 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 172, 2323, 2326 |
| BseMI | GCAATG | 1 cut(s) | 2305 |
| BseMII | CTCAG | 5 cut(s) | 169, 950, 1534, 1844, 2036 |
| BseNI | ACTGG | 3 cut(s) | 1123, 2265, 2317 |
| BseRI | GAGGAG | 4 cut(s) | 155, 226, 299, 1106 |
| BseSI | GKGCMC | 2 cut(s) | 323, 2109 |
| BseX3I | CGGCCG | 1 cut(s) | 497 |
| BseXI | GCAGC | 1 cut(s) | 399 |
| BseYI | CCCAGC | 1 cut(s) | 338 |
| BsgI | GTGCAG | 1 cut(s) | 548 |
| Bsh1236I | CGCG | 1 cut(s) | 12 |
| Bsh1285I | CGRYCG | 1 cut(s) | 500 |
| BshFI | GGCC | 7 cut(s) | 177, 398, 499, 1234, 1536, 2316, 2345 |
| BshVI | ATCGAT | 1 cut(s) | 738 |
| BsiEI | CGRYCG | 1 cut(s) | 500 |
| BsiHKAI | GWGCWC | 1 cut(s) | 323 |
| BsiSI | CCGG | 2 cut(s) | 500, 920 |
| BsiWI | CGTACG | 1 cut(s) | 513 |
| BslFI | GGGAC | 4 cut(s) | 193, 563, 1922, 2223 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 172, 2323, 2326 |
| BsmAI | GTCTC | 8 cut(s) | 19, 39, 1271, 1343, 1489, 1518, 1737, 2293 |
| BsmBI | CGTCTC | 3 cut(s) | 19, 1343, 2293 |
| BsmFI | GGGAC | 4 cut(s) | 193, 563, 1922, 2223 |
| BsmI | GAATGC | 1 cut(s) | 492 |
| BsnI | GGCC | 7 cut(s) | 177, 398, 499, 1234, 1536, 2316, 2345 |
| Bsp119I | TTCGAA | 1 cut(s) | 434 |
| Bsp1286I | GDGCHC | 2 cut(s) | 323, 2109 |
| Bsp1407I | TGTACA | 1 cut(s) | 77 |
| Bsp143I | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| BspACI | CCGC | 8 cut(s) | 148, 189, 273, 524, 533, 536, 1088, 1298 |
| BspANI | GGCC | 7 cut(s) | 177, 398, 499, 1234, 1536, 2316, 2345 |
| BspCNI | CTCAG | 5 cut(s) | 168, 951, 1533, 1845, 2035 |
| BspDI | ATCGAT | 1 cut(s) | 738 |
| BspFNI | CGCG | 1 cut(s) | 12 |
| BspLI | GGNNCC | 1 cut(s) | 1465 |
| BspMI | ACCTGC | 1 cut(s) | 2322 |
| BspPI | GGATC | 3 cut(s) | 70, 807, 1031 |
| BspT104I | TTCGAA | 1 cut(s) | 434 |
| BsrBI | CCGCTC | 1 cut(s) | 275 |
| BsrDI | GCAATG | 1 cut(s) | 2305 |
| BsrGI | TGTACA | 1 cut(s) | 77 |
| BsrI | ACTGG | 3 cut(s) | 1123, 2265, 2317 |
| BssECI | CCNNGG | 5 cut(s) | 58, 1537, 1996, 2346, 2421 |
| BssMI | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| BssNAI | GTATAC | 2 cut(s) | 941, 1035 |
| BssSI | CACGAG | 1 cut(s) | 1221 |
| BssT1I | CCWWGG | 1 cut(s) | 2421 |
| Bst1107I | GTATAC | 2 cut(s) | 941, 1035 |
| Bst2BI | CACGAG | 1 cut(s) | 1221 |
| Bst2UI | CCWGG | 2 cut(s) | 1009, 2348 |
| Bst4CI | ACNGT | 4 cut(s) | 1807, 2000, 2045, 2216 |
| Bst6I | CTCTTC | 4 cut(s) | 24, 266, 581, 888 |
| BstAUI | TGTACA | 1 cut(s) | 77 |
| BstBAI | YACGTR | 3 cut(s) | 513, 2177, 2190 |
| BstBI | TTCGAA | 1 cut(s) | 434 |
| BstC8I | GCNNGC | 4 cut(s) | 152, 319, 531, 1961 |
| BstDEI | CTNAG | 7 cut(s) | 30, 155, 959, 1520, 1853, 2022, 2359 |
| BstDSI | CCRYGG | 1 cut(s) | 1996 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 170, 2321 |
| BstF5I | GGATG | 9 cut(s) | 670, 798, 928, 1495, 1713, 1882, 1904, 1992, 2389 |
| BstFNI | CGCG | 1 cut(s) | 12 |
| BstHHI | GCGC | 3 cut(s) | 12, 1391, 2240 |
| BstKTI | GATC | 6 cut(s) | 65, 738, 802, 976, 1026, 1972 |
| BstMAI | GTCTC | 8 cut(s) | 19, 39, 1271, 1343, 1489, 1518, 1737, 2293 |
| BstMBI | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| BstMCI | CGRYCG | 1 cut(s) | 500 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 530, 847, 2180 |
| BstNI | CCWGG | 2 cut(s) | 1009, 2348 |
| BstNSI | RCATGY | 2 cut(s) | 307, 2298 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 384 |
| BstSCI | CCNGG | 2 cut(s) | 1007, 2346 |
| BstSFI | CTRYAG | 1 cut(s) | 1590 |
| BstSLI | GKGCMC | 2 cut(s) | 323, 2109 |
| BstSNI | TACGTA | 1 cut(s) | 2190 |
| BstUI | CGCG | 1 cut(s) | 12 |
| BstV1I | GCAGC | 1 cut(s) | 399 |
| BstV2I | GAAGAC | 1 cut(s) | 1425 |
| BstZ17I | GTATAC | 2 cut(s) | 941, 1035 |
| BstZI | CGGCCG | 1 cut(s) | 497 |
| Bsu15I | ATCGAT | 1 cut(s) | 738 |
| BsuRI | GGCC | 7 cut(s) | 177, 398, 499, 1234, 1536, 2316, 2345 |
| BsuTUI | ATCGAT | 1 cut(s) | 738 |
| BtgI | CCRYGG | 1 cut(s) | 1996 |
| BtsCI | GGATG | 9 cut(s) | 670, 798, 928, 1495, 1713, 1882, 1904, 1992, 2389 |
| BtsI | GCAGTG | 1 cut(s) | 1753 |
| BtsIMutI | CAGTG | 4 cut(s) | 1753, 2041, 2212, 2239 |
| BveI | ACCTGC | 1 cut(s) | 2322 |
| Cac8I | GCNNGC | 4 cut(s) | 152, 319, 531, 1961 |
| CfoI | GCGC | 3 cut(s) | 12, 1391, 2240 |
| Cfr13I | GGNCC | 3 cut(s) | 175, 2140, 2344 |
| ClaI | ATCGAT | 1 cut(s) | 738 |
| CseI | GACGC | 1 cut(s) | 1952 |
| Csp6I | GTAC | 4 cut(s) | 78, 514, 1310, 2251 |
| CviQI | GTAC | 4 cut(s) | 78, 514, 1310, 2251 |
| DdeI | CTNAG | 7 cut(s) | 30, 155, 959, 1520, 1853, 2022, 2359 |
| DpnI | GATC | 6 cut(s) | 64, 737, 801, 975, 1025, 1971 |
| DpnII | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| DraIII | CACNNNGTG | 1 cut(s) | 318 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1763 |
| EaeI | YGGCCR | 2 cut(s) | 396, 497 |
| EagI | CGGCCG | 1 cut(s) | 497 |
| Eam1104I | CTCTTC | 4 cut(s) | 24, 266, 581, 888 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1763 |
| EarI | CTCTTC | 4 cut(s) | 24, 266, 581, 888 |
| EciI | GGCGGA | 1 cut(s) | 1313 |
| EclXI | CGGCCG | 1 cut(s) | 497 |
| Eco105I | TACGTA | 1 cut(s) | 2190 |
| Eco130I | CCWWGG | 1 cut(s) | 2421 |
| Eco47I | GGWCC | 1 cut(s) | 2140 |
| Eco52I | CGGCCG | 1 cut(s) | 497 |
| Eco57I | CTGAAG | 2 cut(s) | 1740, 2215 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 170, 2321 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2140 |
| EcoRII | CCWGG | 2 cut(s) | 1007, 2346 |
| EcoT14I | CCWWGG | 1 cut(s) | 2421 |
| ErhI | CCWWGG | 1 cut(s) | 2421 |
| Esp3I | CGTCTC | 3 cut(s) | 19, 1343, 2293 |
| FaqI | GGGAC | 4 cut(s) | 193, 563, 1922, 2223 |
| FbaI | TGATCA | 1 cut(s) | 973 |
| FblI | GTMKAC | 3 cut(s) | 940, 1034, 1171 |
| Fnu4HI | GCNGC | 2 cut(s) | 413, 534 |
| FokI | GGATG | 9 cut(s) | 677, 805, 935, 1502, 1720, 1869, 1911, 1979, 2396 |
| Fsp4HI | GCNGC | 2 cut(s) | 413, 534 |
| FspBI | CTAG | 1 cut(s) | 416 |
| FspI | TGCGCA | 1 cut(s) | 1390 |
| GlaI | GCGC | 3 cut(s) | 11, 1390, 2239 |
| GluI | GCNGC | 2 cut(s) | 413, 534 |
| GsaI | CCCAGC | 1 cut(s) | 342 |
| HaeIII | GGCC | 7 cut(s) | 177, 398, 499, 1234, 1536, 2316, 2345 |
| HapII | CCGG | 2 cut(s) | 500, 920 |
| HgaI | GACGC | 1 cut(s) | 1952 |
| HhaI | GCGC | 3 cut(s) | 12, 1391, 2240 |
| Hin6I | GCGC | 3 cut(s) | 10, 1389, 2238 |
| HinP1I | GCGC | 3 cut(s) | 10, 1389, 2238 |
| HincII | GTYRAC | 2 cut(s) | 1172, 2074 |
| HindII | GTYRAC | 2 cut(s) | 1172, 2074 |
| HindIII | AAGCTT | 1 cut(s) | 542 |
| HpaII | CCGG | 2 cut(s) | 500, 920 |
| HphI | GGTGA | 6 cut(s) | 219, 550, 770, 835, 980, 1168 |
| Hpy166II | GTNNAC | 9 cut(s) | 321, 510, 941, 1035, 1172, 1810, 2056, 2074, 2219 |
| Hpy188III | TCNNGA | 7 cut(s) | 1130, 1408, 1415, 1502, 1826, 1967, 2339 |
| Hpy8I | GTNNAC | 9 cut(s) | 321, 510, 941, 1035, 1172, 1810, 2056, 2074, 2219 |
| Hpy99I | CGWCG | 1 cut(s) | 2150 |
| HpyCH4III | ACNGT | 4 cut(s) | 1807, 2000, 2045, 2216 |
| HpyCH4IV | ACGT | 6 cut(s) | 512, 731, 1352, 2176, 2189, 2286 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 530, 847, 2180 |
| HpyF3I | CTNAG | 7 cut(s) | 30, 155, 959, 1520, 1853, 2022, 2359 |
| HpySE526I | ACGT | 6 cut(s) | 512, 731, 1352, 2176, 2189, 2286 |
| HspAI | GCGC | 3 cut(s) | 10, 1389, 2238 |
| Ksp22I | TGATCA | 1 cut(s) | 973 |
| Kzo9I | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| LmnI | GCTCC | 2 cut(s) | 280, 312 |
| Lsp1109I | GCAGC | 1 cut(s) | 399 |
| LweI | GCATC | 6 cut(s) | 324, 655, 1251, 1600, 1866, 2395 |
| MaeI | CTAG | 1 cut(s) | 416 |
| MaeII | ACGT | 6 cut(s) | 512, 731, 1352, 2176, 2189, 2286 |
| MaeIII | GTNAC | 3 cut(s) | 718, 823, 1947 |
| MalI | GATC | 6 cut(s) | 64, 737, 801, 975, 1025, 1971 |
| MbiI | CCGCTC | 1 cut(s) | 275 |
| MboI | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| MhlI | GDGCHC | 2 cut(s) | 323, 2109 |
| MlsI | TGGCCA | 1 cut(s) | 398 |
| MluNI | TGGCCA | 1 cut(s) | 398 |
| MlyI | GAGTC | 5 cut(s) | 77, 335, 488, 610, 1683 |
| MmeI | TCCRAC | 8 cut(s) | 111, 124, 193, 270, 324, 744, 870, 1679 |
| Mox20I | TGGCCA | 1 cut(s) | 398 |
| MroXI | GAANNNNTTC | 2 cut(s) | 611, 677 |
| MscI | TGGCCA | 1 cut(s) | 398 |
| MseI | TTAA | 6 cut(s) | 843, 1109, 1368, 1440, 1938, 2096 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2001 |
| Msp20I | TGGCCA | 1 cut(s) | 398 |
| MspI | CCGG | 2 cut(s) | 500, 920 |
| MspR9I | CCNGG | 2 cut(s) | 1009, 2348 |
| Mva1269I | GAATGC | 1 cut(s) | 492 |
| MvaI | CCWGG | 2 cut(s) | 1009, 2348 |
| MvnI | CGCG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 530, 847, 2180 |
| NdeII | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| NlaIV | GGNNCC | 1 cut(s) | 1465 |
| NmeAIII | GCCGAG | 1 cut(s) | 1562 |
| NmuCI | GTSAC | 1 cut(s) | 823 |
| NsbI | TGCGCA | 1 cut(s) | 1390 |
| NspI | RCATGY | 2 cut(s) | 307, 2298 |
| NspV | TTCGAA | 1 cut(s) | 434 |
| PctI | GAATGC | 1 cut(s) | 492 |
| PdmI | GAANNNNTTC | 2 cut(s) | 611, 677 |
| PfeI | GAWTC | 6 cut(s) | 96, 159, 1261, 1411, 1849, 1974 |
| Pfl23II | CGTACG | 1 cut(s) | 513 |
| PflFI | GACNNNGTC | 1 cut(s) | 2144 |
| PkrI | GCNGC | 2 cut(s) | 414, 535 |
| PleI | GAGTC | 5 cut(s) | 77, 334, 487, 609, 1683 |
| PpsI | GAGTC | 5 cut(s) | 77, 334, 487, 609, 1683 |
| Ppu21I | YACGTR | 3 cut(s) | 513, 2177, 2190 |
| PpuMI | RGGWCCY | 1 cut(s) | 2140 |
| PshAI | GACNNNNGTC | 1 cut(s) | 384 |
| PshBI | ATTAAT | 2 cut(s) | 1109, 1368 |
| PsiI | TTATAA | 3 cut(s) | 621, 831, 1472 |
| Psp5II | RGGWCCY | 1 cut(s) | 2140 |
| Psp6I | CCWGG | 2 cut(s) | 1007, 2346 |
| PspFI | CCCAGC | 1 cut(s) | 338 |
| PspGI | CCWGG | 2 cut(s) | 1007, 2346 |
| PspLI | CGTACG | 1 cut(s) | 513 |
| PspN4I | GGNNCC | 1 cut(s) | 1465 |
| PspPI | GGNCC | 3 cut(s) | 175, 2140, 2344 |
| PspPPI | RGGWCCY | 1 cut(s) | 2140 |
| PsyI | GACNNNGTC | 1 cut(s) | 2144 |
| RsaI | GTAC | 4 cut(s) | 79, 515, 1311, 2252 |
| RsaNI | GTAC | 4 cut(s) | 78, 514, 1310, 2251 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2001 |
| SalI | GTCGAC | 1 cut(s) | 1170 |
| SaqAI | TTAA | 6 cut(s) | 843, 1109, 1368, 1440, 1938, 2096 |
| SatI | GCNGC | 2 cut(s) | 413, 534 |
| Sau3AI | GATC | 6 cut(s) | 62, 735, 799, 973, 1023, 1969 |
| Sau96I | GGNCC | 3 cut(s) | 175, 2140, 2344 |
| SchI | GAGTC | 5 cut(s) | 77, 335, 488, 610, 1683 |
| ScrFI | CCNGG | 2 cut(s) | 1009, 2348 |
| SduI | GDGCHC | 2 cut(s) | 323, 2109 |
| SfaNI | GCATC | 6 cut(s) | 324, 655, 1251, 1600, 1866, 2395 |
| SfcI | CTRYAG | 1 cut(s) | 1590 |
| SfuI | TTCGAA | 1 cut(s) | 434 |
| SinI | GGWCC | 1 cut(s) | 2140 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2001 |
| SmlI | CTYRAG | 1 cut(s) | 455 |
| SmoI | CTYRAG | 1 cut(s) | 455 |
| SnaBI | TACGTA | 1 cut(s) | 2190 |
| SsiI | CCGC | 8 cut(s) | 148, 189, 273, 524, 533, 536, 1088, 1298 |
| SspMI | CTAG | 1 cut(s) | 416 |
| StyD4I | CCNGG | 2 cut(s) | 1007, 2346 |
| StyI | CCWWGG | 1 cut(s) | 2421 |
| TaaI | ACNGT | 4 cut(s) | 1807, 2000, 2045, 2216 |
| TaiI | ACGT | 6 cut(s) | 515, 734, 1355, 2179, 2192, 2289 |
| TaqI | TCGA | 8 cut(s) | 434, 477, 681, 738, 948, 1171, 1972, 2148 |
| TatI | WGTACW | 1 cut(s) | 77 |
| TauI | GCSGC | 1 cut(s) | 536 |
| TfiI | GAWTC | 6 cut(s) | 96, 159, 1261, 1411, 1849, 1974 |
| Tru1I | TTAA | 6 cut(s) | 843, 1109, 1368, 1440, 1938, 2096 |
| Tru9I | TTAA | 6 cut(s) | 843, 1109, 1368, 1440, 1938, 2096 |
| TscAI | CASTG | 4 cut(s) | 1753, 2048, 2219, 2239 |
| TseFI | GTSAC | 1 cut(s) | 823 |
| TseI | GCWGC | 1 cut(s) | 412 |
| Tsp45I | GTSAC | 1 cut(s) | 823 |
| TspGWI | ACGGA | 2 cut(s) | 338, 374 |
| TspRI | CASTG | 4 cut(s) | 1753, 2048, 2219, 2239 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2144 |
| VneI | GTGCAC | 1 cut(s) | 319 |
| VpaK11BI | GGWCC | 1 cut(s) | 2140 |
| VspI | ATTAAT | 2 cut(s) | 1109, 1368 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 170, 2321 |
| XapI | RAATTY | 2 cut(s) | 1268, 1342 |
| XceI | RCATGY | 2 cut(s) | 307, 2298 |
| XmiI | GTMKAC | 3 cut(s) | 940, 1034, 1171 |
| XmnI | GAANNNNTTC | 2 cut(s) | 611, 677 |
| XspI | CTAG | 1 cut(s) | 416 |