ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 562 |
| AciI | CCGC | 1 cut(s) | 288 |
| AcoI | YGGCCR | 1 cut(s) | 384 |
| AcsI | RAATTY | 1 cut(s) | 120 |
| AfaI | GTAC | 2 cut(s) | 342, 399 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 24, 490 |
| AgeI | ACCGGT | 1 cut(s) | 483 |
| AgsI | TTSAA | 5 cut(s) | 86, 307, 452, 593, 610 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 520, 552 |
| AluBI | AGCT | 3 cut(s) | 89, 300, 444 |
| AluI | AGCT | 3 cut(s) | 89, 300, 444 |
| AoxI | GGCC | 1 cut(s) | 384 |
| ApeKI | GCWGC | 1 cut(s) | 444 |
| ApoI | RAATTY | 1 cut(s) | 120 |
| AsiGI | ACCGGT | 1 cut(s) | 483 |
| AsuHPI | GGTGA | 1 cut(s) | 179 |
| AsuII | TTCGAA | 1 cut(s) | 526 |
| AxyI | CCTNAGG | 1 cut(s) | 567 |
| BanII | GRGCYC | 1 cut(s) | 136 |
| BbvCI | CCTCAGC | 1 cut(s) | 291 |
| BbvI | GCAGC | 1 cut(s) | 431 |
| BccI | CCATC | 1 cut(s) | 630 |
| BciVI | GTATCC | 1 cut(s) | 198 |
| BfaI | CTAG | 2 cut(s) | 138, 348 |
| BfuI | GTATCC | 1 cut(s) | 198 |
| BisI | GCNGC | 1 cut(s) | 445 |
| BlsI | GCNGC | 1 cut(s) | 446 |
| BmcAI | AGTACT | 1 cut(s) | 399 |
| BmiI | GGNNCC | 1 cut(s) | 135 |
| BmsI | GCATC | 1 cut(s) | 32 |
| Bpu10I | CCTNAGC | 1 cut(s) | 291 |
| Bpu14I | TTCGAA | 1 cut(s) | 526 |
| BsaBI | GATNNNNATC | 1 cut(s) | 273 |
| BsaWI | WCCGGW | 1 cut(s) | 483 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 359, 389 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 24, 490 |
| Bse118I | RCCGGY | 2 cut(s) | 386, 483 |
| Bse21I | CCTNAGG | 1 cut(s) | 567 |
| Bse3DI | GCAATG | 1 cut(s) | 104 |
| Bse8I | GATNNNNATC | 1 cut(s) | 273 |
| BseGI | GGATG | 1 cut(s) | 641 |
| BseJI | GATNNNNATC | 1 cut(s) | 273 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 24, 490 |
| BseMI | GCAATG | 1 cut(s) | 104 |
| BseMII | CTCAG | 3 cut(s) | 81, 282, 431 |
| BseRI | GAGGAG | 1 cut(s) | 326 |
| BseXI | GCAGC | 1 cut(s) | 431 |
| BshFI | GGCC | 1 cut(s) | 386 |
| BshTI | ACCGGT | 1 cut(s) | 483 |
| BsiSI | CCGG | 2 cut(s) | 387, 484 |
| BslFI | GGGAC | 1 cut(s) | 19 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 24, 490 |
| BsmFI | GGGAC | 1 cut(s) | 19 |
| BsmI | GAATGC | 1 cut(s) | 357 |
| BsnI | GGCC | 1 cut(s) | 386 |
| Bsp119I | TTCGAA | 1 cut(s) | 526 |
| Bsp1286I | GDGCHC | 1 cut(s) | 136 |
| BspACI | CCGC | 1 cut(s) | 288 |
| BspANI | GGCC | 1 cut(s) | 386 |
| BspCNI | CTCAG | 3 cut(s) | 82, 283, 430 |
| BspLI | GGNNCC | 1 cut(s) | 135 |
| BspT104I | TTCGAA | 1 cut(s) | 526 |
| BsrDI | GCAATG | 1 cut(s) | 104 |
| BsrFI | RCCGGY | 2 cut(s) | 386, 483 |
| BssAI | RCCGGY | 2 cut(s) | 386, 483 |
| Bst4CI | ACNGT | 1 cut(s) | 167 |
| Bst6I | CTCTTC | 2 cut(s) | 158, 174 |
| BstBI | TTCGAA | 1 cut(s) | 526 |
| BstC8I | GCNNGC | 2 cut(s) | 288, 388 |
| BstDEI | CTNAG | 6 cut(s) | 90, 219, 278, 291, 417, 567 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 22 |
| BstF5I | GGATG | 1 cut(s) | 641 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 623 |
| BstV1I | GCAGC | 1 cut(s) | 431 |
| Bsu36I | CCTNAGG | 1 cut(s) | 567 |
| BsuI | GTATCC | 1 cut(s) | 198 |
| BsuRI | GGCC | 1 cut(s) | 386 |
| BtsCI | GGATG | 1 cut(s) | 641 |
| Cac8I | GCNNGC | 2 cut(s) | 288, 388 |
| Cfr10I | RCCGGY | 2 cut(s) | 386, 483 |
| Csp6I | GTAC | 2 cut(s) | 341, 398 |
| CspAI | ACCGGT | 1 cut(s) | 483 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 485, 520 |
| CviAII | CATG | 2 cut(s) | 110, 266 |
| CviQI | GTAC | 2 cut(s) | 341, 398 |
| DdeI | CTNAG | 6 cut(s) | 90, 219, 278, 291, 417, 567 |
| EaeI | YGGCCR | 1 cut(s) | 384 |
| Eam1104I | CTCTTC | 2 cut(s) | 158, 174 |
| EarI | CTCTTC | 2 cut(s) | 158, 174 |
| Eco24I | GRGCYC | 1 cut(s) | 136 |
| Eco81I | CCTNAGG | 1 cut(s) | 567 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 22 |
| EcoT22I | ATGCAT | 2 cut(s) | 106, 603 |
| EcoT38I | GRGCYC | 1 cut(s) | 136 |
| FaeI | CATG | 2 cut(s) | 113, 269 |
| FaqI | GGGAC | 1 cut(s) | 19 |
| FatI | CATG | 2 cut(s) | 109, 265 |
| FauI | CCCGC | 1 cut(s) | 295 |
| FauNDI | CATATG | 1 cut(s) | 465 |
| FblI | GTMKAC | 1 cut(s) | 562 |
| Fnu4HI | GCNGC | 1 cut(s) | 445 |
| FriOI | GRGCYC | 1 cut(s) | 136 |
| Fsp4HI | GCNGC | 1 cut(s) | 445 |
| FspBI | CTAG | 2 cut(s) | 138, 348 |
| GluI | GCNGC | 1 cut(s) | 445 |
| HaeIII | GGCC | 1 cut(s) | 386 |
| HapII | CCGG | 2 cut(s) | 387, 484 |
| Hin1II | CATG | 2 cut(s) | 113, 269 |
| HincII | GTYRAC | 1 cut(s) | 563 |
| HindII | GTYRAC | 1 cut(s) | 563 |
| HinfI | GANTC | 2 cut(s) | 255, 559 |
| HpaII | CCGG | 2 cut(s) | 387, 484 |
| HphI | GGTGA | 1 cut(s) | 179 |
| Hpy166II | GTNNAC | 1 cut(s) | 563 |
| Hpy188I | TCNGA | 1 cut(s) | 517 |
| Hpy188III | TCNNGA | 3 cut(s) | 22, 328, 593 |
| Hpy8I | GTNNAC | 1 cut(s) | 563 |
| Hpy99I | CGWCG | 1 cut(s) | 167 |
| HpyAV | CCTTC | 3 cut(s) | 28, 301, 438 |
| HpyCH4III | ACNGT | 1 cut(s) | 167 |
| HpyCH4V | TGCA | 7 cut(s) | 104, 109, 126, 355, 481, 601, 617 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 623 |
| HpyF3I | CTNAG | 6 cut(s) | 90, 219, 278, 291, 417, 567 |
| Hsp92II | CATG | 2 cut(s) | 113, 269 |
| KroI | GCCGGC | 1 cut(s) | 386 |
| KroNI | GCCGGC | 1 cut(s) | 388 |
| LmnI | GCTCC | 2 cut(s) | 139, 241 |
| LpnPI | CCDG | 5 cut(s) | 72, 189, 400, 404, 497 |
| Lsp1109I | GCAGC | 1 cut(s) | 431 |
| LweI | GCATC | 1 cut(s) | 32 |
| MaeI | CTAG | 2 cut(s) | 138, 348 |
| MaeIII | GTNAC | 2 cut(s) | 95, 412 |
| MboII | GAAGA | 3 cut(s) | 145, 148, 191 |
| MhlI | GDGCHC | 1 cut(s) | 136 |
| MluCI | AATT | 4 cut(s) | 120, 170, 497, 554 |
| MlyI | GAGTC | 2 cut(s) | 264, 568 |
| Mph1103I | ATGCAT | 2 cut(s) | 106, 603 |
| MroNI | GCCGGC | 1 cut(s) | 386 |
| MseI | TTAA | 3 cut(s) | 30, 405, 488 |
| MslI | CAYNNNNRTG | 2 cut(s) | 350, 468 |
| MspA1I | CMGCKG | 1 cut(s) | 290 |
| MspI | CCGG | 2 cut(s) | 387, 484 |
| Mva1269I | GAATGC | 1 cut(s) | 357 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 623 |
| NaeI | GCCGGC | 1 cut(s) | 388 |
| NdeI | CATATG | 1 cut(s) | 465 |
| NgoMIV | GCCGGC | 1 cut(s) | 386 |
| NlaIII | CATG | 2 cut(s) | 113, 269 |
| NlaIV | GGNNCC | 1 cut(s) | 135 |
| NmuCI | GTSAC | 1 cut(s) | 412 |
| NsiI | ATGCAT | 2 cut(s) | 106, 603 |
| NspV | TTCGAA | 1 cut(s) | 526 |
| PctI | GAATGC | 1 cut(s) | 357 |
| PdiI | GCCGGC | 1 cut(s) | 388 |
| PinAI | ACCGGT | 1 cut(s) | 483 |
| PkrI | GCNGC | 1 cut(s) | 446 |
| PleI | GAGTC | 2 cut(s) | 263, 567 |
| PpsI | GAGTC | 2 cut(s) | 263, 567 |
| PspN4I | GGNNCC | 1 cut(s) | 135 |
| RsaI | GTAC | 2 cut(s) | 342, 399 |
| RsaNI | GTAC | 2 cut(s) | 341, 398 |
| RseI | CAYNNNNRTG | 2 cut(s) | 350, 468 |
| SalI | GTCGAC | 1 cut(s) | 561 |
| SaqAI | TTAA | 3 cut(s) | 30, 405, 488 |
| SatI | GCNGC | 1 cut(s) | 445 |
| ScaI | AGTACT | 1 cut(s) | 399 |
| SchI | GAGTC | 2 cut(s) | 264, 568 |
| SduI | GDGCHC | 1 cut(s) | 136 |
| SfaNI | GCATC | 1 cut(s) | 32 |
| SfuI | TTCGAA | 1 cut(s) | 526 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 350, 468 |
| Sse9I | AATT | 4 cut(s) | 120, 170, 497, 554 |
| SsiI | CCGC | 1 cut(s) | 288 |
| SspMI | CTAG | 2 cut(s) | 138, 348 |
| TaaI | ACNGT | 1 cut(s) | 167 |
| TaqI | TCGA | 3 cut(s) | 21, 526, 562 |
| TaqII | GACCGA | 1 cut(s) | 400 |
| TasI | AATT | 4 cut(s) | 120, 170, 497, 554 |
| TatI | WGTACW | 1 cut(s) | 397 |
| Tru1I | TTAA | 3 cut(s) | 30, 405, 488 |
| Tru9I | TTAA | 3 cut(s) | 30, 405, 488 |
| TseFI | GTSAC | 1 cut(s) | 412 |
| TseI | GCWGC | 1 cut(s) | 444 |
| Tsp45I | GTSAC | 1 cut(s) | 412 |
| TspDTI | ATGAA | 1 cut(s) | 420 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 22 |
| XapI | RAATTY | 1 cut(s) | 120 |
| XmiI | GTMKAC | 1 cut(s) | 562 |
| XspI | CTAG | 2 cut(s) | 138, 348 |
| ZrmI | AGTACT | 1 cut(s) | 399 |
| Zsp2I | ATGCAT | 2 cut(s) | 106, 603 |