ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 374 |
| AccB1I | GGYRCC | 2 cut(s) | 374, 1295 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1582 |
| AccBSI | CCGCTC | 1 cut(s) | 793 |
| AccIII | TCCGGA | 1 cut(s) | 153 |
| AciI | CCGC | 4 cut(s) | 88, 793, 1311, 1558 |
| AclI | AACGTT | 1 cut(s) | 520 |
| AclWI | GGATC | 5 cut(s) | 88, 358, 508, 521, 770 |
| AcsI | RAATTY | 3 cut(s) | 602, 1057, 1130 |
| AcuI | CTGAAG | 1 cut(s) | 1424 |
| AfaI | GTAC | 2 cut(s) | 376, 1482 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 535, 1175, 1208, 1582 |
| AflII | CTTAAG | 1 cut(s) | 1324 |
| AgsI | TTSAA | 6 cut(s) | 14, 75, 343, 608, 857, 1361 |
| AjiI | CACGTC | 2 cut(s) | 1099, 1172 |
| AjnI | CCWGG | 2 cut(s) | 39, 1524 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1499, 1531 |
| Alw21I | GWGCWC | 2 cut(s) | 58, 1189 |
| Alw26I | GTCTC | 2 cut(s) | 412, 1251 |
| Alw44I | GTGCAC | 1 cut(s) | 1185 |
| AlwI | GGATC | 5 cut(s) | 88, 358, 508, 521, 770 |
| Ama87I | CYCGRG | 1 cut(s) | 571 |
| Aor13HI | TCCGGA | 1 cut(s) | 153 |
| AoxI | GGCC | 2 cut(s) | 674, 1089 |
| ApaLI | GTGCAC | 1 cut(s) | 1185 |
| ApeKI | GCWGC | 5 cut(s) | 740, 907, 1586, 1649, 1658 |
| ApoI | RAATTY | 3 cut(s) | 602, 1057, 1130 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1250, 1282 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 749 |
| Asp718I | GGTACC | 1 cut(s) | 374 |
| AspA2I | CCTAGG | 1 cut(s) | 1003 |
| AspS9I | GGNCC | 1 cut(s) | 1522 |
| AsuHPI | GGTGA | 1 cut(s) | 281 |
| AsuII | TTCGAA | 1 cut(s) | 803 |
| AsuNHI | GCTAGC | 1 cut(s) | 184 |
| AvaI | CYCGRG | 1 cut(s) | 571 |
| AvaII | GGWCC | 1 cut(s) | 1522 |
| AvrII | CCTAGG | 1 cut(s) | 1003 |
| BaeGI | GKGCMC | 1 cut(s) | 1189 |
| BamHI | GGATCC | 1 cut(s) | 513 |
| BanI | GGYRCC | 2 cut(s) | 374, 1295 |
| BanII | GRGCYC | 1 cut(s) | 269 |
| BauI | CACGAG | 2 cut(s) | 307, 1062 |
| BbsI | GAAGAC | 1 cut(s) | 110 |
| Bbv12I | GWGCWC | 2 cut(s) | 58, 1189 |
| BbvCI | CCTCAGC | 2 cut(s) | 450, 1353 |
| BbvI | GCAGC | 5 cut(s) | 752, 919, 1573, 1661, 1670 |
| BccI | CCATC | 6 cut(s) | 301, 416, 682, 908, 1286, 1584 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1361, 1395 |
| BciT130I | CCWGG | 2 cut(s) | 41, 1526 |
| BclI | TGATCA | 1 cut(s) | 1101 |
| BcoDI | GTCTC | 2 cut(s) | 412, 1251 |
| BfaI | CTAG | 6 cut(s) | 185, 788, 1004, 1083, 1254, 1635 |
| BfmI | CTRYAG | 2 cut(s) | 874, 1653 |
| BfrI | CTTAAG | 1 cut(s) | 1324 |
| BglII | AGATCT | 1 cut(s) | 747 |
| BisI | GCNGC | 5 cut(s) | 741, 908, 1587, 1650, 1659 |
| BlnI | CCTAGG | 1 cut(s) | 1003 |
| BlsI | GCNGC | 5 cut(s) | 742, 909, 1588, 1651, 1660 |
| Bme1390I | CCNGG | 2 cut(s) | 41, 1526 |
| Bme18I | GGWCC | 1 cut(s) | 1522 |
| BmeT110I | CYCGRG | 1 cut(s) | 571 |
| BmgBI | CACGTC | 2 cut(s) | 1099, 1172 |
| BmgT120I | GGNCC | 1 cut(s) | 1522 |
| BmiI | GGNNCC | 4 cut(s) | 376, 515, 1200, 1297 |
| BmrFI | CCNGG | 2 cut(s) | 41, 1526 |
| BmsI | GCATC | 1 cut(s) | 1417 |
| BmtI | GCTAGC | 1 cut(s) | 188 |
| BpiI | GAAGAC | 1 cut(s) | 110 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1045, 1077 |
| BpmI | CTGGAG | 1 cut(s) | 62 |
| Bpu10I | CCTNAGC | 3 cut(s) | 145, 450, 1353 |
| Bpu14I | TTCGAA | 1 cut(s) | 803 |
| Bsa29I | ATCGAT | 1 cut(s) | 1112 |
| BsaI | GGTCTC | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 3 cut(s) | 260, 1003, 1525 |
| BsaWI | WCCGGW | 2 cut(s) | 153, 1204 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 35, 65, 751, 781 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 535, 1175, 1208, 1582 |
| Bse1I | ACTGG | 1 cut(s) | 990 |
| Bse3DI | GCAATG | 2 cut(s) | 413, 1537 |
| BseAI | TCCGGA | 1 cut(s) | 153 |
| BseBI | CCWGG | 2 cut(s) | 41, 1526 |
| BseCI | ATCGAT | 1 cut(s) | 1112 |
| BseDI | CCNNGG | 3 cut(s) | 260, 1003, 1525 |
| BseGI | GGATG | 5 cut(s) | 427, 508, 919, 940, 1297 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 535, 1175, 1208, 1582 |
| BseMI | GCAATG | 2 cut(s) | 413, 1537 |
| BseMII | CTCAG | 4 cut(s) | 189, 441, 580, 1344 |
| BseNI | ACTGG | 1 cut(s) | 990 |
| BseRI | GAGGAG | 6 cut(s) | 149, 328, 467, 470, 551, 1191 |
| BseSI | GKGCMC | 1 cut(s) | 1189 |
| BseXI | GCAGC | 5 cut(s) | 752, 919, 1573, 1661, 1670 |
| BsgI | GTGCAG | 3 cut(s) | 1335, 1572, 1628 |
| BshFI | GGCC | 2 cut(s) | 676, 1091 |
| BshNI | GGYRCC | 2 cut(s) | 374, 1295 |
| BshVI | ATCGAT | 1 cut(s) | 1112 |
| BsiHKAI | GWGCWC | 2 cut(s) | 58, 1189 |
| BsiHKCI | CYCGRG | 1 cut(s) | 571 |
| BsiSI | CCGG | 3 cut(s) | 154, 419, 1205 |
| BslFI | GGGAC | 3 cut(s) | 893, 939, 985 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 535, 1175, 1208, 1582 |
| BsmAI | GTCTC | 2 cut(s) | 412, 1251 |
| BsmBI | CGTCTC | 1 cut(s) | 1251 |
| BsmFI | GGGAC | 3 cut(s) | 893, 939, 985 |
| BsmI | GAATGC | 3 cut(s) | 118, 1122, 1603 |
| BsnI | GGCC | 2 cut(s) | 676, 1091 |
| Bso31I | GGTCTC | 1 cut(s) | 412 |
| BsoBI | CYCGRG | 1 cut(s) | 571 |
| Bsp119I | TTCGAA | 1 cut(s) | 803 |
| Bsp1286I | GDGCHC | 3 cut(s) | 58, 269, 1189 |
| Bsp13I | TCCGGA | 1 cut(s) | 153 |
| BspACI | CCGC | 4 cut(s) | 88, 793, 1311, 1558 |
| BspANI | GGCC | 2 cut(s) | 676, 1091 |
| BspCNI | CTCAG | 4 cut(s) | 188, 442, 579, 1345 |
| BspDI | ATCGAT | 1 cut(s) | 1112 |
| BspEI | TCCGGA | 1 cut(s) | 153 |
| BspLI | GGNNCC | 4 cut(s) | 376, 515, 1200, 1297 |
| BspOI | GCTAGC | 1 cut(s) | 188 |
| BspPI | GGATC | 5 cut(s) | 88, 358, 508, 521, 770 |
| BspT104I | TTCGAA | 1 cut(s) | 803 |
| BspT107I | GGYRCC | 2 cut(s) | 374, 1295 |
| BspTI | CTTAAG | 1 cut(s) | 1324 |
| BspTNI | GGTCTC | 1 cut(s) | 412 |
| BsrBI | CCGCTC | 1 cut(s) | 793 |
| BsrDI | GCAATG | 2 cut(s) | 413, 1537 |
| BsrI | ACTGG | 1 cut(s) | 990 |
| BssECI | CCNNGG | 3 cut(s) | 260, 1003, 1525 |
| BssSI | CACGAG | 2 cut(s) | 307, 1062 |
| BssT1I | CCWWGG | 1 cut(s) | 1003 |
| Bst2BI | CACGAG | 2 cut(s) | 307, 1062 |
| Bst2UI | CCWGG | 2 cut(s) | 41, 1526 |
| Bst4CI | ACNGT | 2 cut(s) | 1235, 1616 |
| Bst6I | CTCTTC | 1 cut(s) | 800 |
| BstAFI | CTTAAG | 1 cut(s) | 1324 |
| BstBI | TTCGAA | 1 cut(s) | 803 |
| BstC8I | GCNNGC | 6 cut(s) | 186, 283, 1366, 1370, 1374, 1560 |
| BstDEI | CTNAG | 6 cut(s) | 145, 175, 450, 566, 1353, 1603 |
| BstDSI | CCRYGG | 1 cut(s) | 260 |
| BstF5I | GGATG | 5 cut(s) | 427, 508, 919, 940, 1297 |
| BstMAI | GTCTC | 2 cut(s) | 412, 1251 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 85, 185, 194, 1349, 1444, 1655, 1658 |
| BstNI | CCWGG | 2 cut(s) | 41, 1526 |
| BstNSI | RCATGY | 3 cut(s) | 1368, 1372, 1376 |
| BstSCI | CCNGG | 2 cut(s) | 39, 1524 |
| BstSFI | CTRYAG | 2 cut(s) | 874, 1653 |
| BstSLI | GKGCMC | 1 cut(s) | 1189 |
| BstV1I | GCAGC | 5 cut(s) | 752, 919, 1573, 1661, 1670 |
| BstV2I | GAAGAC | 1 cut(s) | 110 |
| BstX2I | RGATCY | 5 cut(s) | 93, 350, 513, 747, 762 |
| BstYI | RGATCY | 5 cut(s) | 93, 350, 513, 747, 762 |
| Bsu15I | ATCGAT | 1 cut(s) | 1112 |
| BsuRI | GGCC | 2 cut(s) | 676, 1091 |
| BsuTUI | ATCGAT | 1 cut(s) | 1112 |
| BtgI | CCRYGG | 1 cut(s) | 260 |
| BtrI | CACGTC | 2 cut(s) | 1099, 1172 |
| BtsCI | GGATG | 5 cut(s) | 427, 508, 919, 940, 1297 |
| Cac8I | GCNNGC | 6 cut(s) | 186, 283, 1366, 1370, 1374, 1560 |
| Cfr13I | GGNCC | 1 cut(s) | 1522 |
| ClaI | ATCGAT | 1 cut(s) | 1112 |
| Csp6I | GTAC | 2 cut(s) | 375, 1481 |
| CviQI | GTAC | 2 cut(s) | 375, 1481 |
| DdeI | CTNAG | 6 cut(s) | 145, 175, 450, 566, 1353, 1603 |
| Eam1104I | CTCTTC | 1 cut(s) | 800 |
| EarI | CTCTTC | 1 cut(s) | 800 |
| Eco130I | CCWWGG | 1 cut(s) | 1003 |
| Eco147I | AGGCCT | 1 cut(s) | 676 |
| Eco24I | GRGCYC | 1 cut(s) | 269 |
| Eco31I | GGTCTC | 1 cut(s) | 412 |
| Eco47I | GGWCC | 1 cut(s) | 1522 |
| Eco57I | CTGAAG | 1 cut(s) | 1424 |
| Eco88I | CYCGRG | 1 cut(s) | 571 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1522 |
| EcoRI | GAATTC | 1 cut(s) | 1057 |
| EcoRII | CCWGG | 2 cut(s) | 39, 1524 |
| EcoT14I | CCWWGG | 1 cut(s) | 1003 |
| EcoT22I | ATGCAT | 2 cut(s) | 1370, 1374 |
| EcoT38I | GRGCYC | 1 cut(s) | 269 |
| ErhI | CCWWGG | 1 cut(s) | 1003 |
| Esp3I | CGTCTC | 1 cut(s) | 1251 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1070, 1102 |
| FaqI | GGGAC | 3 cut(s) | 893, 939, 985 |
| FauI | CCCGC | 1 cut(s) | 1551 |
| FbaI | TGATCA | 1 cut(s) | 1101 |
| Fnu4HI | GCNGC | 5 cut(s) | 741, 908, 1587, 1650, 1659 |
| FokI | GGATG | 5 cut(s) | 434, 515, 926, 927, 1304 |
| FriOI | GRGCYC | 1 cut(s) | 269 |
| Fsp4HI | GCNGC | 5 cut(s) | 741, 908, 1587, 1650, 1659 |
| FspBI | CTAG | 6 cut(s) | 185, 788, 1004, 1083, 1254, 1635 |
| GluI | GCNGC | 5 cut(s) | 741, 908, 1587, 1650, 1659 |
| GsuI | CTGGAG | 1 cut(s) | 62 |
| HaeIII | GGCC | 2 cut(s) | 676, 1091 |
| HapII | CCGG | 3 cut(s) | 154, 419, 1205 |
| HincII | GTYRAC | 1 cut(s) | 211 |
| HindII | GTYRAC | 1 cut(s) | 211 |
| HindIII | AAGCTT | 2 cut(s) | 195, 713 |
| HinfI | GANTC | 4 cut(s) | 433, 730, 821, 1286 |
| HpaI | GTTAAC | 1 cut(s) | 211 |
| HpaII | CCGG | 3 cut(s) | 154, 419, 1205 |
| HphI | GGTGA | 1 cut(s) | 281 |
| Hpy166II | GTNNAC | 5 cut(s) | 211, 1169, 1187, 1334, 1404 |
| Hpy188I | TCNGA | 7 cut(s) | 513, 687, 952, 1109, 1291, 1443, 1506 |
| Hpy188III | TCNNGA | 6 cut(s) | 154, 274, 727, 788, 1127, 1247 |
| Hpy8I | GTNNAC | 5 cut(s) | 211, 1169, 1187, 1334, 1404 |
| Hpy99I | CGWCG | 2 cut(s) | 493, 1176 |
| HpyAV | CCTTC | 4 cut(s) | 341, 666, 1164, 1173 |
| HpyCH4III | ACNGT | 2 cut(s) | 1235, 1616 |
| HpyCH4IV | ACGT | 4 cut(s) | 520, 610, 1098, 1171 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 85, 185, 194, 1349, 1444, 1655, 1658 |
| HpyF3I | CTNAG | 6 cut(s) | 145, 175, 450, 566, 1353, 1603 |
| HpySE526I | ACGT | 4 cut(s) | 520, 610, 1098, 1171 |
| Kpn2I | TCCGGA | 1 cut(s) | 153 |
| KpnI | GGTACC | 1 cut(s) | 378 |
| Ksp22I | TGATCA | 1 cut(s) | 1101 |
| KspAI | GTTAAC | 1 cut(s) | 211 |
| LmnI | GCTCC | 4 cut(s) | 43, 1204, 1320, 1435 |
| Lsp1109I | GCAGC | 5 cut(s) | 752, 919, 1573, 1661, 1670 |
| LweI | GCATC | 1 cut(s) | 1417 |
| MaeI | CTAG | 6 cut(s) | 185, 788, 1004, 1083, 1254, 1635 |
| MaeII | ACGT | 4 cut(s) | 520, 610, 1098, 1171 |
| MaeIII | GTNAC | 4 cut(s) | 437, 460, 767, 1094 |
| MbiI | CCGCTC | 1 cut(s) | 793 |
| MboII | GAAGA | 9 cut(s) | 103, 115, 313, 470, 721, 742, 757, 817, 1662 |
| MflI | RGATCY | 5 cut(s) | 93, 350, 513, 747, 762 |
| MhlI | GDGCHC | 3 cut(s) | 58, 269, 1189 |
| MluCI | AATT | 7 cut(s) | 14, 549, 602, 955, 1057, 1130, 1144 |
| MmeI | TCCRAC | 4 cut(s) | 541, 798, 1189, 1497 |
| Mph1103I | ATGCAT | 2 cut(s) | 1370, 1374 |
| MroI | TCCGGA | 1 cut(s) | 153 |
| MroXI | GAANNNNTTC | 1 cut(s) | 749 |
| MseI | TTAA | 6 cut(s) | 17, 171, 210, 1325, 1511, 1551 |
| MslI | CAYNNNNRTG | 2 cut(s) | 664, 1596 |
| MspA1I | CMGCKG | 2 cut(s) | 1652, 1661 |
| MspCI | CTTAAG | 1 cut(s) | 1324 |
| MspI | CCGG | 3 cut(s) | 154, 419, 1205 |
| MspR9I | CCNGG | 2 cut(s) | 41, 1526 |
| Mva1269I | GAATGC | 3 cut(s) | 118, 1122, 1603 |
| MvaI | CCWGG | 2 cut(s) | 41, 1526 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 85, 185, 194, 1349, 1444, 1655, 1658 |
| NheI | GCTAGC | 1 cut(s) | 184 |
| NlaIV | GGNNCC | 4 cut(s) | 376, 515, 1200, 1297 |
| NmuCI | GTSAC | 2 cut(s) | 767, 1094 |
| NsiI | ATGCAT | 2 cut(s) | 1370, 1374 |
| NspI | RCATGY | 3 cut(s) | 1368, 1372, 1376 |
| NspV | TTCGAA | 1 cut(s) | 803 |
| PaeI | GCATGC | 3 cut(s) | 1368, 1372, 1376 |
| PaeR7I | CTCGAG | 1 cut(s) | 571 |
| PceI | AGGCCT | 1 cut(s) | 676 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 517 |
| PctI | GAATGC | 3 cut(s) | 118, 1122, 1603 |
| PdmI | GAANNNNTTC | 1 cut(s) | 749 |
| PfeI | GAWTC | 4 cut(s) | 433, 730, 821, 1286 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1582 |
| PkrI | GCNGC | 5 cut(s) | 742, 909, 1588, 1651, 1660 |
| PpuMI | RGGWCCY | 1 cut(s) | 1522 |
| Psp1406I | AACGTT | 1 cut(s) | 520 |
| Psp5II | RGGWCCY | 1 cut(s) | 1522 |
| Psp6I | CCWGG | 2 cut(s) | 39, 1524 |
| PspGI | CCWGG | 2 cut(s) | 39, 1524 |
| PspN4I | GGNNCC | 4 cut(s) | 376, 515, 1200, 1297 |
| PspPI | GGNCC | 1 cut(s) | 1522 |
| PspPPI | RGGWCCY | 1 cut(s) | 1522 |
| PspXI | VCTCGAGB | 1 cut(s) | 571 |
| PsuI | RGATCY | 5 cut(s) | 93, 350, 513, 747, 762 |
| PvuII | CAGCTG | 2 cut(s) | 1652, 1661 |
| RsaI | GTAC | 2 cut(s) | 376, 1482 |
| RsaNI | GTAC | 2 cut(s) | 375, 1481 |
| RseI | CAYNNNNRTG | 2 cut(s) | 664, 1596 |
| SaqAI | TTAA | 6 cut(s) | 17, 171, 210, 1325, 1511, 1551 |
| SatI | GCNGC | 5 cut(s) | 741, 908, 1587, 1650, 1659 |
| Sau96I | GGNCC | 1 cut(s) | 1522 |
| ScrFI | CCNGG | 2 cut(s) | 41, 1526 |
| SduI | GDGCHC | 3 cut(s) | 58, 269, 1189 |
| SfaNI | GCATC | 1 cut(s) | 1417 |
| SfcI | CTRYAG | 2 cut(s) | 874, 1653 |
| Sfr274I | CTCGAG | 1 cut(s) | 571 |
| SfuI | TTCGAA | 1 cut(s) | 803 |
| SinI | GGWCC | 1 cut(s) | 1522 |
| SlaI | CTCGAG | 1 cut(s) | 571 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 664, 1596 |
| SmlI | CTYRAG | 2 cut(s) | 571, 1324 |
| SmoI | CTYRAG | 2 cut(s) | 571, 1324 |
| SphI | GCATGC | 3 cut(s) | 1368, 1372, 1376 |
| Sse9I | AATT | 7 cut(s) | 14, 549, 602, 955, 1057, 1130, 1144 |
| SseBI | AGGCCT | 1 cut(s) | 676 |
| SsiI | CCGC | 4 cut(s) | 88, 793, 1311, 1558 |
| SspI | AATATT | 3 cut(s) | 254, 775, 1228 |
| SspMI | CTAG | 6 cut(s) | 185, 788, 1004, 1083, 1254, 1635 |
| StuI | AGGCCT | 1 cut(s) | 676 |
| StyD4I | CCNGG | 2 cut(s) | 39, 1524 |
| StyI | CCWWGG | 1 cut(s) | 1003 |
| TaaI | ACNGT | 2 cut(s) | 1235, 1616 |
| TaiI | ACGT | 4 cut(s) | 523, 613, 1101, 1174 |
| TaqI | TCGA | 8 cut(s) | 164, 572, 670, 803, 813, 1112, 1174, 1489 |
| TasI | AATT | 7 cut(s) | 14, 549, 602, 955, 1057, 1130, 1144 |
| TatI | WGTACW | 1 cut(s) | 1480 |
| TfiI | GAWTC | 4 cut(s) | 433, 730, 821, 1286 |
| Tru1I | TTAA | 6 cut(s) | 17, 171, 210, 1325, 1511, 1551 |
| Tru9I | TTAA | 6 cut(s) | 17, 171, 210, 1325, 1511, 1551 |
| TseFI | GTSAC | 2 cut(s) | 767, 1094 |
| TseI | GCWGC | 5 cut(s) | 740, 907, 1586, 1649, 1658 |
| Tsp45I | GTSAC | 2 cut(s) | 767, 1094 |
| TspDTI | ATGAA | 4 cut(s) | 742, 929, 1130, 1535 |
| TspGWI | ACGGA | 1 cut(s) | 1275 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1582 |
| Vha464I | CTTAAG | 1 cut(s) | 1324 |
| VneI | GTGCAC | 1 cut(s) | 1185 |
| VpaK11BI | GGWCC | 1 cut(s) | 1522 |
| XapI | RAATTY | 3 cut(s) | 602, 1057, 1130 |
| XbaI | TCTAGA | 1 cut(s) | 787 |
| XceI | RCATGY | 3 cut(s) | 1368, 1372, 1376 |
| XhoI | CTCGAG | 1 cut(s) | 571 |
| XmaJI | CCTAGG | 1 cut(s) | 1003 |
| XmnI | GAANNNNTTC | 1 cut(s) | 749 |
| XspI | CTAG | 6 cut(s) | 185, 788, 1004, 1083, 1254, 1635 |
| Zsp2I | ATGCAT | 2 cut(s) | 1370, 1374 |