ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| EPF | PF17181 | 41 - 86 | 6e-15 | Epidermal patterning factor proteins |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 222 |
| AcvI | CACGTG | 1 cut(s) | 95 |
| AgsI | TTSAA | 2 cut(s) | 129, 148 |
| AluBI | AGCT | 1 cut(s) | 113 |
| AluI | AGCT | 1 cut(s) | 113 |
| BbrPI | CACGTG | 1 cut(s) | 95 |
| BclI | TGATCA | 1 cut(s) | 106 |
| BmsI | GCATC | 1 cut(s) | 17 |
| BpmI | CTGGAG | 2 cut(s) | 101, 120 |
| BsaAI | YACGTR | 1 cut(s) | 95 |
| BsaJI | CCNNGG | 1 cut(s) | 24 |
| BsaWI | WCCGGW | 1 cut(s) | 77 |
| BseDI | CCNNGG | 1 cut(s) | 24 |
| BsgI | GTGCAG | 1 cut(s) | 157 |
| BsiSI | CCGG | 1 cut(s) | 78 |
| Bsp143I | GATC | 1 cut(s) | 106 |
| Bsp19I | CCATGG | 1 cut(s) | 24 |
| BssECI | CCNNGG | 1 cut(s) | 24 |
| BssMI | GATC | 1 cut(s) | 106 |
| BssT1I | CCWWGG | 1 cut(s) | 24 |
| Bst4CI | ACNGT | 1 cut(s) | 70 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 171 |
| BstBAI | YACGTR | 1 cut(s) | 95 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDSI | CCRYGG | 1 cut(s) | 24 |
| BstKTI | GATC | 1 cut(s) | 109 |
| BstMBI | GATC | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 171 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 70, 222 |
| BtgI | CCRYGG | 1 cut(s) | 24 |
| BtsIMutI | CAGTG | 1 cut(s) | 75 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| CviAII | CATG | 2 cut(s) | 25, 222 |
| CviJI | RGCY | 3 cut(s) | 32, 85, 113 |
| CviKI_1 | RGCY | 3 cut(s) | 32, 85, 113 |
| DpnI | GATC | 1 cut(s) | 108 |
| DpnII | GATC | 1 cut(s) | 106 |
| Eco130I | CCWWGG | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 1 cut(s) | 222 |
| Eco72I | CACGTG | 1 cut(s) | 95 |
| EcoT14I | CCWWGG | 1 cut(s) | 24 |
| ErhI | CCWWGG | 1 cut(s) | 24 |
| FaeI | CATG | 2 cut(s) | 28, 225 |
| FaiI | YATR | 7 cut(s) | 26, 65, 88, 152, 223, 250, 252 |
| FatI | CATG | 2 cut(s) | 24, 221 |
| FauNDI | CATATG | 1 cut(s) | 250 |
| FbaI | TGATCA | 1 cut(s) | 106 |
| GsuI | CTGGAG | 2 cut(s) | 101, 120 |
| HapII | CCGG | 1 cut(s) | 78 |
| Hin1II | CATG | 2 cut(s) | 28, 225 |
| HinfI | GANTC | 1 cut(s) | 74 |
| HpaII | CCGG | 1 cut(s) | 78 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy188I | TCNGA | 2 cut(s) | 17, 186 |
| Hpy188III | TCNNGA | 2 cut(s) | 118, 137 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| HpyCH4III | ACNGT | 1 cut(s) | 70 |
| HpyCH4IV | ACGT | 1 cut(s) | 94 |
| HpyCH4V | TGCA | 2 cut(s) | 165, 174 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 171 |
| HpySE526I | ACGT | 1 cut(s) | 94 |
| Hsp92II | CATG | 2 cut(s) | 28, 225 |
| Ksp22I | TGATCA | 1 cut(s) | 106 |
| Kzo9I | GATC | 1 cut(s) | 106 |
| LpnPI | CCDG | 6 cut(s) | 91, 131, 143, 150, 184, 213 |
| LweI | GCATC | 1 cut(s) | 17 |
| MaeII | ACGT | 1 cut(s) | 94 |
| MalI | GATC | 1 cut(s) | 108 |
| MboI | GATC | 1 cut(s) | 106 |
| MboII | GAAGA | 1 cut(s) | 215 |
| MluCI | AATT | 2 cut(s) | 51, 192 |
| MlyI | GAGTC | 1 cut(s) | 68 |
| MnlI | CCTC | 4 cut(s) | 47, 144, 233, 267 |
| MslI | CAYNNNNRTG | 3 cut(s) | 68, 220, 226 |
| MspI | CCGG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 171 |
| NcoI | CCATGG | 1 cut(s) | 24 |
| NdeI | CATATG | 1 cut(s) | 250 |
| NdeII | GATC | 1 cut(s) | 106 |
| NlaIII | CATG | 2 cut(s) | 28, 225 |
| PleI | GAGTC | 1 cut(s) | 68 |
| PmaCI | CACGTG | 1 cut(s) | 95 |
| PmlI | CACGTG | 1 cut(s) | 95 |
| PpsI | GAGTC | 1 cut(s) | 68 |
| Ppu21I | YACGTR | 1 cut(s) | 95 |
| PspCI | CACGTG | 1 cut(s) | 95 |
| RseI | CAYNNNNRTG | 3 cut(s) | 68, 220, 226 |
| Sau3AI | GATC | 1 cut(s) | 106 |
| SchI | GAGTC | 1 cut(s) | 68 |
| SetI | ASST | 5 cut(s) | 97, 115, 202, 244, 259 |
| SfaNI | GCATC | 1 cut(s) | 17 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 68, 220, 226 |
| Sse9I | AATT | 2 cut(s) | 51, 192 |
| SspI | AATATT | 1 cut(s) | 209 |
| StyI | CCWWGG | 1 cut(s) | 24 |
| TaaI | ACNGT | 1 cut(s) | 70 |
| TaiI | ACGT | 1 cut(s) | 97 |
| TasI | AATT | 2 cut(s) | 51, 192 |
| TscAI | CASTG | 1 cut(s) | 75 |
| TspDTI | ATGAA | 1 cut(s) | 267 |
| TspRI | CASTG | 1 cut(s) | 75 |