Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 314 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 287 |
| AdeI | CACNNNGTG | 1 cut(s) | 287 |
| AfaI | GTAC | 1 cut(s) | 10 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 287 |
| AflII | CTTAAG | 1 cut(s) | 124 |
| AluBI | AGCT | 3 cut(s) | 129, 231, 276 |
| AluI | AGCT | 3 cut(s) | 129, 231, 276 |
| Alw21I | GWGCWC | 1 cut(s) | 233 |
| Alw26I | GTCTC | 1 cut(s) | 98 |
| Ama87I | CYCGRG | 1 cut(s) | 232 |
| ApeKI | GCWGC | 1 cut(s) | 276 |
| AsuHPI | GGTGA | 1 cut(s) | 41 |
| AvaI | CYCGRG | 1 cut(s) | 232 |
| BanI | GGYRCC | 1 cut(s) | 314 |
| BanII | GRGCYC | 1 cut(s) | 233 |
| Bbv12I | GWGCWC | 1 cut(s) | 233 |
| BbvI | GCAGC | 1 cut(s) | 263 |
| BccI | CCATC | 1 cut(s) | 305 |
| BcoDI | GTCTC | 1 cut(s) | 98 |
| BfaI | CTAG | 1 cut(s) | 285 |
| BfrI | CTTAAG | 1 cut(s) | 124 |
| BisI | GCNGC | 1 cut(s) | 277 |
| BlsI | GCNGC | 1 cut(s) | 278 |
| BmeT110I | CYCGRG | 1 cut(s) | 232 |
| BmiI | GGNNCC | 1 cut(s) | 316 |
| BpuEI | CTTGAG | 1 cut(s) | 224 |
| BsaAI | YACGTR | 1 cut(s) | 134 |
| BsaI | GGTCTC | 1 cut(s) | 98 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 287 |
| Bse1I | ACTGG | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 287 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BseNI | ACTGG | 1 cut(s) | 23 |
| BseRI | GAGGAG | 1 cut(s) | 110 |
| BseXI | GCAGC | 1 cut(s) | 263 |
| BshNI | GGYRCC | 1 cut(s) | 314 |
| BsiHKAI | GWGCWC | 1 cut(s) | 233 |
| BsiHKCI | CYCGRG | 1 cut(s) | 232 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 287 |
| BsmAI | GTCTC | 1 cut(s) | 98 |
| BsmI | GAATGC | 1 cut(s) | 117 |
| Bso31I | GGTCTC | 1 cut(s) | 98 |
| BsoBI | CYCGRG | 1 cut(s) | 232 |
| Bsp1286I | GDGCHC | 1 cut(s) | 233 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspLI | GGNNCC | 1 cut(s) | 316 |
| BspT107I | GGYRCC | 1 cut(s) | 314 |
| BspTI | CTTAAG | 1 cut(s) | 124 |
| BspTNI | GGTCTC | 1 cut(s) | 98 |
| BsrI | ACTGG | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 2 cut(s) | 161, 324 |
| BstAFI | CTTAAG | 1 cut(s) | 124 |
| BstBAI | YACGTR | 1 cut(s) | 134 |
| BstC8I | GCNNGC | 2 cut(s) | 180, 261 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstMAI | GTCTC | 1 cut(s) | 98 |
| BstV1I | GCAGC | 1 cut(s) | 263 |
| Cac8I | GCNNGC | 2 cut(s) | 180, 261 |
| Csp6I | GTAC | 1 cut(s) | 9 |
| CviAII | CATG | 1 cut(s) | 224 |
| CviJI | RGCY | 6 cut(s) | 66, 101, 129, 231, 276, 295 |
| CviKI_1 | RGCY | 6 cut(s) | 66, 101, 129, 231, 276, 295 |
| CviQI | GTAC | 1 cut(s) | 9 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DraIII | CACNNNGTG | 1 cut(s) | 287 |
| Eam1104I | CTCTTC | 2 cut(s) | 161, 324 |
| EarI | CTCTTC | 2 cut(s) | 161, 324 |
| Ecl136II | GAGCTC | 1 cut(s) | 231 |
| Eco24I | GRGCYC | 1 cut(s) | 233 |
| Eco31I | GGTCTC | 1 cut(s) | 98 |
| Eco53kI | GAGCTC | 1 cut(s) | 231 |
| Eco88I | CYCGRG | 1 cut(s) | 232 |
| EcoICRI | GAGCTC | 1 cut(s) | 231 |
| EcoT38I | GRGCYC | 1 cut(s) | 233 |
| FaeI | CATG | 1 cut(s) | 227 |
| FaiI | YATR | 8 cut(s) | 35, 113, 144, 151, 153, 175, 225, 321 |
| FatI | CATG | 1 cut(s) | 223 |
| FauNDI | CATATG | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 1 cut(s) | 277 |
| FriOI | GRGCYC | 1 cut(s) | 233 |
| Fsp4HI | GCNGC | 1 cut(s) | 277 |
| FspBI | CTAG | 1 cut(s) | 285 |
| GluI | GCNGC | 1 cut(s) | 277 |
| Hin1II | CATG | 1 cut(s) | 227 |
| HindIII | AAGCTT | 1 cut(s) | 127 |
| HphI | GGTGA | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 1 cut(s) | 87 |
| Hpy188III | TCNNGA | 1 cut(s) | 203 |
| Hpy8I | GTNNAC | 1 cut(s) | 87 |
| HpyAV | CCTTC | 3 cut(s) | 149, 246, 319 |
| HpyCH4IV | ACGT | 1 cut(s) | 133 |
| HpyCH4V | TGCA | 1 cut(s) | 182 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| HpySE526I | ACGT | 1 cut(s) | 133 |
| Hsp92II | CATG | 1 cut(s) | 227 |
| LmnI | GCTCC | 1 cut(s) | 273 |
| LpnPI | CCDG | 3 cut(s) | 4, 80, 245 |
| Lsp1109I | GCAGC | 1 cut(s) | 263 |
| MaeI | CTAG | 1 cut(s) | 285 |
| MaeII | ACGT | 1 cut(s) | 133 |
| MboII | GAAGA | 4 cut(s) | 178, 253, 256, 341 |
| MhlI | GDGCHC | 1 cut(s) | 233 |
| MluCI | AATT | 1 cut(s) | 36 |
| MseI | TTAA | 2 cut(s) | 125, 297 |
| MspCI | CTTAAG | 1 cut(s) | 124 |
| Mva1269I | GAATGC | 1 cut(s) | 117 |
| NdeI | CATATG | 1 cut(s) | 151 |
| NlaIII | CATG | 1 cut(s) | 227 |
| NlaIV | GGNNCC | 1 cut(s) | 316 |
| PaeR7I | CTCGAG | 1 cut(s) | 232 |
| PctI | GAATGC | 1 cut(s) | 117 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 287 |
| PkrI | GCNGC | 1 cut(s) | 278 |
| Ppu21I | YACGTR | 1 cut(s) | 134 |
| Psp124BI | GAGCTC | 1 cut(s) | 233 |
| PspN4I | GGNNCC | 1 cut(s) | 316 |
| PspXI | VCTCGAGB | 1 cut(s) | 232 |
| RsaI | GTAC | 1 cut(s) | 10 |
| RsaNI | GTAC | 1 cut(s) | 9 |
| SacI | GAGCTC | 1 cut(s) | 233 |
| SaqAI | TTAA | 2 cut(s) | 125, 297 |
| SatI | GCNGC | 1 cut(s) | 277 |
| SduI | GDGCHC | 1 cut(s) | 233 |
| SetI | ASST | 6 cut(s) | 131, 136, 173, 233, 278, 286 |
| Sfr274I | CTCGAG | 1 cut(s) | 232 |
| SlaI | CTCGAG | 1 cut(s) | 232 |
| SmlI | CTYRAG | 3 cut(s) | 124, 203, 232 |
| SmoI | CTYRAG | 3 cut(s) | 124, 203, 232 |
| Sse9I | AATT | 1 cut(s) | 36 |
| SspMI | CTAG | 1 cut(s) | 285 |
| SstI | GAGCTC | 1 cut(s) | 233 |
| TaiI | ACGT | 1 cut(s) | 136 |
| TaqI | TCGA | 1 cut(s) | 233 |
| TasI | AATT | 1 cut(s) | 36 |
| Tru1I | TTAA | 2 cut(s) | 125, 297 |
| Tru9I | TTAA | 2 cut(s) | 125, 297 |
| TseI | GCWGC | 1 cut(s) | 276 |
| TspDTI | ATGAA | 2 cut(s) | 168, 212 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 287 |
| Vha464I | CTTAAG | 1 cut(s) | 124 |
| XhoI | CTCGAG | 1 cut(s) | 232 |
| XspI | CTAG | 1 cut(s) | 285 |