Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 10 |
| AccB1I | GGYRCC | 2 cut(s) | 1252, 3082 |
| AccBSI | CCGCTC | 1 cut(s) | 1357 |
| AccI | GTMKAC | 2 cut(s) | 2566, 3564 |
| AccII | CGCG | 1 cut(s) | 940 |
| AciI | CCGC | 6 cut(s) | 1040, 1357, 1603, 2279, 2303, 3543 |
| AclWI | GGATC | 4 cut(s) | 532, 1055, 2621, 2726 |
| AcoI | YGGCCR | 1 cut(s) | 3900 |
| AcsI | RAATTY | 5 cut(s) | 376, 779, 787, 2062, 3158 |
| AcuI | CTGAAG | 5 cut(s) | 350, 1227, 2743, 3009, 3515 |
| AcyI | GRCGYC | 2 cut(s) | 511, 1253 |
| AdeI | CACNNNGTG | 1 cut(s) | 1153 |
| AfaI | GTAC | 3 cut(s) | 1323, 2016, 2919 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 114, 1811, 2783, 3139, 3542 |
| AflII | CTTAAG | 1 cut(s) | 1637 |
| AflIII | ACRYGT | 1 cut(s) | 2615 |
| AjiI | CACGTC | 1 cut(s) | 1722 |
| AjnI | CCWGG | 7 cut(s) | 390, 746, 1255, 1543, 2144, 2438, 3576 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1487, 1519, 2779, 2811, 3040, 3072 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3403, 3435 |
| Alw21I | GWGCWC | 2 cut(s) | 877, 1939 |
| AlwI | GGATC | 4 cut(s) | 532, 1055, 2621, 2726 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2597 |
| AoxI | GGCC | 4 cut(s) | 428, 2173, 2762, 3900 |
| ApeKI | GCWGC | 5 cut(s) | 2026, 2879, 3143, 3346, 3349 |
| ApoI | RAATTY | 5 cut(s) | 376, 779, 787, 2062, 3158 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1958, 1990, 3546, 3578 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1143 |
| AspLEI | GCGC | 1 cut(s) | 1255 |
| AspS9I | GGNCC | 4 cut(s) | 428, 1259, 2149, 3481 |
| AsuHPI | GGTGA | 6 cut(s) | 547, 869, 2056, 3263, 3511, 3908 |
| AsuII | TTCGAA | 1 cut(s) | 358 |
| AsuNHI | GCTAGC | 1 cut(s) | 2122 |
| AvaII | GGWCC | 3 cut(s) | 1259, 2149, 3481 |
| AxyI | CCTNAGG | 2 cut(s) | 225, 719 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 117, 117, 150, 150 |
| BalI | TGGCCA | 1 cut(s) | 3902 |
| BanI | GGYRCC | 2 cut(s) | 1252, 3082 |
| BanII | GRGCYC | 2 cut(s) | 877, 3382 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 876, 908 |
| BbsI | GAAGAC | 2 cut(s) | 3474, 3704 |
| Bbv12I | GWGCWC | 2 cut(s) | 877, 1939 |
| BbvCI | CCTCAGC | 1 cut(s) | 1863 |
| BbvI | GCAGC | 5 cut(s) | 2013, 2891, 3130, 3358, 3361 |
| BceAI | ACGGC | 1 cut(s) | 1282 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3513, 3547 |
| BciT130I | CCWGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| BciVI | GTATCC | 3 cut(s) | 2327, 2906, 2969 |
| BclI | TGATCA | 3 cut(s) | 190, 562, 1020 |
| BfmI | CTRYAG | 1 cut(s) | 1170 |
| BfoI | RGCGCY | 1 cut(s) | 1256 |
| BfrI | CTTAAG | 1 cut(s) | 1637 |
| BfuAI | ACCTGC | 1 cut(s) | 10 |
| BfuI | GTATCC | 3 cut(s) | 2327, 2906, 2969 |
| BglII | AGATCT | 2 cut(s) | 1923, 2289 |
| BisI | GCNGC | 5 cut(s) | 2027, 2880, 3144, 3347, 3350 |
| BlsI | GCNGC | 5 cut(s) | 2028, 2881, 3145, 3348, 3351 |
| Bme1390I | CCNGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| Bme18I | GGWCC | 3 cut(s) | 1259, 2149, 3481 |
| BmgBI | CACGTC | 1 cut(s) | 1722 |
| BmgT120I | GGNCC | 4 cut(s) | 428, 1259, 2149, 3481 |
| BmiI | GGNNCC | 4 cut(s) | 1254, 2150, 2151, 3084 |
| BmrFI | CCNGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| BmsI | GCATC | 3 cut(s) | 1027, 2542, 3226 |
| BmtI | GCTAGC | 1 cut(s) | 2126 |
| BpiI | GAAGAC | 2 cut(s) | 3474, 3704 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1856, 1888 |
| BpmI | CTGGAG | 4 cut(s) | 413, 1072, 1395, 1706 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1863, 3078 |
| Bpu14I | TTCGAA | 1 cut(s) | 358 |
| BpuEI | CTTGAG | 1 cut(s) | 2015 |
| BsaAI | YACGTR | 2 cut(s) | 2616, 2894 |
| BsaHI | GRCGYC | 2 cut(s) | 511, 1253 |
| BsaI | GGTCTC | 1 cut(s) | 2539 |
| BsaJI | CCNNGG | 7 cut(s) | 747, 1543, 1995, 2145, 2439, 2735, 3730 |
| BsaWI | WCCGGW | 3 cut(s) | 1002, 2548, 3035 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 114, 1811, 2783, 3139, 3542 |
| Bse1I | ACTGG | 1 cut(s) | 2435 |
| Bse21I | CCTNAGG | 2 cut(s) | 225, 719 |
| Bse3DI | GCAATG | 3 cut(s) | 1456, 2371, 3717 |
| BseBI | CCWGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| BseDI | CCNNGG | 7 cut(s) | 747, 1543, 1995, 2145, 2439, 2735, 3730 |
| BseGI | GGATG | 7 cut(s) | 1048, 1069, 2258, 2534, 2557, 2824, 3625 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 114, 1811, 2783, 3139, 3542 |
| BseMI | GCAATG | 3 cut(s) | 1456, 2371, 3717 |
| BseMII | CTCAG | 7 cut(s) | 1050, 1188, 1854, 2261, 2604, 3092, 3249 |
| BseNI | ACTGG | 1 cut(s) | 2435 |
| BseRI | GAGGAG | 8 cut(s) | 410, 653, 1226, 1367, 2012, 2015, 2659, 2837 |
| BseXI | GCAGC | 5 cut(s) | 2013, 2891, 3130, 3358, 3361 |
| BseYI | CCCAGC | 3 cut(s) | 687, 865, 2134 |
| Bsh1236I | CGCG | 1 cut(s) | 940 |
| BshFI | GGCC | 4 cut(s) | 430, 2175, 2764, 3902 |
| BshNI | GGYRCC | 2 cut(s) | 1252, 3082 |
| BsiHKAI | GWGCWC | 2 cut(s) | 877, 1939 |
| BsiSI | CCGG | 3 cut(s) | 1003, 2549, 3036 |
| BslFI | GGGAC | 4 cut(s) | 1526, 1827, 2135, 3116 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 114, 1811, 2783, 3139, 3542 |
| BsmBI | CGTCTC | 1 cut(s) | 616 |
| BsmFI | GGGAC | 4 cut(s) | 1526, 1827, 2135, 3116 |
| BsmI | GAATGC | 1 cut(s) | 1228 |
| BsnI | GGCC | 4 cut(s) | 430, 2175, 2764, 3902 |
| Bso31I | GGTCTC | 1 cut(s) | 2539 |
| Bsp119I | TTCGAA | 1 cut(s) | 358 |
| Bsp1286I | GDGCHC | 3 cut(s) | 877, 1939, 3382 |
| BspACI | CCGC | 6 cut(s) | 1040, 1357, 1603, 2279, 2303, 3543 |
| BspANI | GGCC | 4 cut(s) | 430, 2175, 2764, 3902 |
| BspCNI | CTCAG | 7 cut(s) | 1051, 1189, 1855, 2262, 2603, 3091, 3248 |
| BspFNI | CGCG | 1 cut(s) | 940 |
| BspHI | TCATGA | 1 cut(s) | 738 |
| BspLI | GGNNCC | 4 cut(s) | 1254, 2150, 2151, 3084 |
| BspMI | ACCTGC | 1 cut(s) | 10 |
| BspOI | GCTAGC | 1 cut(s) | 2126 |
| BspPI | GGATC | 4 cut(s) | 532, 1055, 2621, 2726 |
| BspT104I | TTCGAA | 1 cut(s) | 358 |
| BspT107I | GGYRCC | 2 cut(s) | 1252, 3082 |
| BspTI | CTTAAG | 1 cut(s) | 1637 |
| BspTNI | GGTCTC | 1 cut(s) | 2539 |
| BsrBI | CCGCTC | 1 cut(s) | 1357 |
| BsrDI | GCAATG | 3 cut(s) | 1456, 2371, 3717 |
| BsrI | ACTGG | 1 cut(s) | 2435 |
| BssECI | CCNNGG | 7 cut(s) | 747, 1543, 1995, 2145, 2439, 2735, 3730 |
| BssNI | GRCGYC | 2 cut(s) | 511, 1253 |
| BssT1I | CCWWGG | 1 cut(s) | 2735 |
| Bst2UI | CCWGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| Bst4CI | ACNGT | 9 cut(s) | 281, 673, 1756, 2014, 2671, 2698, 3569, 3672, 3764 |
| Bst6I | CTCTTC | 8 cut(s) | 74, 1203, 1884, 2066, 2868, 2908, 3028, 3273 |
| BstACI | GRCGYC | 2 cut(s) | 511, 1253 |
| BstAFI | CTTAAG | 1 cut(s) | 1637 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3305, 3674 |
| BstBAI | YACGTR | 2 cut(s) | 2616, 2894 |
| BstBI | TTCGAA | 1 cut(s) | 358 |
| BstC8I | GCNNGC | 8 cut(s) | 416, 432, 685, 825, 2124, 2931, 2989, 3780 |
| BstEII | GGTNACC | 1 cut(s) | 2140 |
| BstF5I | GGATG | 7 cut(s) | 1048, 1069, 2258, 2534, 2557, 2824, 3625 |
| BstFNI | CGCG | 1 cut(s) | 940 |
| BstH2I | RGCGCY | 1 cut(s) | 1256 |
| BstHHI | GCGC | 1 cut(s) | 1255 |
| BstNI | CCWGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| BstNSI | RCATGY | 4 cut(s) | 1135, 2612, 2849, 2959 |
| BstPI | GGTNACC | 1 cut(s) | 2140 |
| BstSCI | CCNGG | 7 cut(s) | 390, 746, 1255, 1543, 2144, 2438, 3576 |
| BstSFI | CTRYAG | 1 cut(s) | 1170 |
| BstSNI | TACGTA | 1 cut(s) | 2894 |
| BstUI | CGCG | 1 cut(s) | 940 |
| BstV1I | GCAGC | 5 cut(s) | 2013, 2891, 3130, 3358, 3361 |
| BstV2I | GAAGAC | 2 cut(s) | 3474, 3704 |
| BstX2I | RGATCY | 4 cut(s) | 1047, 1923, 2289, 2731 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3910 |
| BstYI | RGATCY | 4 cut(s) | 1047, 1923, 2289, 2731 |
| Bsu36I | CCTNAGG | 2 cut(s) | 225, 719 |
| BsuI | GTATCC | 3 cut(s) | 2327, 2906, 2969 |
| BsuRI | GGCC | 4 cut(s) | 430, 2175, 2764, 3902 |
| BtgZI | GCGATG | 1 cut(s) | 2843 |
| BtrI | CACGTC | 1 cut(s) | 1722 |
| BtsCI | GGATG | 7 cut(s) | 1048, 1069, 2258, 2534, 2557, 2824, 3625 |
| BtsIMutI | CAGTG | 7 cut(s) | 200, 326, 1761, 2267, 2428, 2703, 3243 |
| BveI | ACCTGC | 1 cut(s) | 10 |
| Cac8I | GCNNGC | 8 cut(s) | 416, 432, 685, 825, 2124, 2931, 2989, 3780 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2597 |
| CciI | TCATGA | 1 cut(s) | 738 |
| CfoI | GCGC | 1 cut(s) | 1255 |
| Cfr13I | GGNCC | 4 cut(s) | 428, 1259, 2149, 3481 |
| CseI | GACGC | 2 cut(s) | 500, 3006 |
| Csp6I | GTAC | 3 cut(s) | 1322, 2015, 2918 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3879, 3914 |
| CviQI | GTAC | 3 cut(s) | 1322, 2015, 2918 |
| DinI | GGCGCC | 1 cut(s) | 1254 |
| DraI | TTTAAA | 1 cut(s) | 792 |
| DraIII | CACNNNGTG | 1 cut(s) | 1153 |
| EaeI | YGGCCR | 1 cut(s) | 3900 |
| Eam1104I | CTCTTC | 8 cut(s) | 74, 1203, 1884, 2066, 2868, 2908, 3028, 3273 |
| EarI | CTCTTC | 8 cut(s) | 74, 1203, 1884, 2066, 2868, 2908, 3028, 3273 |
| Ecl136II | GAGCTC | 1 cut(s) | 875 |
| Eco105I | TACGTA | 1 cut(s) | 2894 |
| Eco130I | CCWWGG | 1 cut(s) | 2735 |
| Eco147I | AGGCCT | 2 cut(s) | 2175, 2764 |
| Eco24I | GRGCYC | 2 cut(s) | 877, 3382 |
| Eco31I | GGTCTC | 1 cut(s) | 2539 |
| Eco32I | GATATC | 2 cut(s) | 802, 3127 |
| Eco47I | GGWCC | 3 cut(s) | 1259, 2149, 3481 |
| Eco53kI | GAGCTC | 1 cut(s) | 875 |
| Eco57I | CTGAAG | 5 cut(s) | 350, 1227, 2743, 3009, 3515 |
| Eco81I | CCTNAGG | 2 cut(s) | 225, 719 |
| Eco91I | GGTNACC | 1 cut(s) | 2140 |
| EcoICRI | GAGCTC | 1 cut(s) | 875 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2149 |
| EcoO65I | GGTNACC | 1 cut(s) | 2140 |
| EcoRII | CCWGG | 7 cut(s) | 390, 746, 1255, 1543, 2144, 2438, 3576 |
| EcoRV | GATATC | 2 cut(s) | 802, 3127 |
| EcoT14I | CCWWGG | 1 cut(s) | 2735 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 3684 |
| EcoT38I | GRGCYC | 2 cut(s) | 877, 3382 |
| EgeI | GGCGCC | 1 cut(s) | 1254 |
| EheI | GGCGCC | 1 cut(s) | 1254 |
| ErhI | CCWWGG | 1 cut(s) | 2735 |
| Esp3I | CGTCTC | 1 cut(s) | 616 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2276, 2308, 3130, 3162 |
| FaqI | GGGAC | 4 cut(s) | 1526, 1827, 2135, 3116 |
| FauI | CCCGC | 2 cut(s) | 2272, 3536 |
| FauNDI | CATATG | 4 cut(s) | 1660, 3107, 3657, 3684 |
| FbaI | TGATCA | 3 cut(s) | 190, 562, 1020 |
| FblI | GTMKAC | 2 cut(s) | 2566, 3564 |
| Fnu4HI | GCNGC | 5 cut(s) | 2027, 2880, 3144, 3347, 3350 |
| FokI | GGATG | 7 cut(s) | 1055, 1076, 2265, 2541, 2564, 2831, 3632 |
| FriOI | GRGCYC | 2 cut(s) | 877, 3382 |
| Fsp4HI | GCNGC | 5 cut(s) | 2027, 2880, 3144, 3347, 3350 |
| GlaI | GCGC | 1 cut(s) | 1254 |
| GluI | GCNGC | 5 cut(s) | 2027, 2880, 3144, 3347, 3350 |
| GsaI | CCCAGC | 3 cut(s) | 691, 869, 2138 |
| GsuI | CTGGAG | 4 cut(s) | 413, 1072, 1395, 1706 |
| HaeII | RGCGCY | 1 cut(s) | 1256 |
| HaeIII | GGCC | 4 cut(s) | 430, 2175, 2764, 3902 |
| HapII | CCGG | 3 cut(s) | 1003, 2549, 3036 |
| HgaI | GACGC | 2 cut(s) | 500, 3006 |
| HhaI | GCGC | 1 cut(s) | 1255 |
| Hin1I | GRCGYC | 2 cut(s) | 511, 1253 |
| Hin6I | GCGC | 1 cut(s) | 1253 |
| HinP1I | GCGC | 1 cut(s) | 1253 |
| HincII | GTYRAC | 3 cut(s) | 221, 2054, 3565 |
| HindII | GTYRAC | 3 cut(s) | 221, 2054, 3565 |
| HindIII | AAGCTT | 1 cut(s) | 821 |
| HpaII | CCGG | 3 cut(s) | 1003, 2549, 3036 |
| HphI | GGTGA | 6 cut(s) | 547, 869, 2056, 3263, 3511, 3908 |
| Hpy166II | GTNNAC | 8 cut(s) | 101, 221, 2054, 2567, 2694, 2865, 3484, 3565 |
| Hpy8I | GTNNAC | 8 cut(s) | 101, 221, 2054, 2567, 2694, 2865, 3484, 3565 |
| Hpy99I | CGWCG | 3 cut(s) | 856, 3566, 3569 |
| HpyCH4III | ACNGT | 9 cut(s) | 281, 673, 1756, 2014, 2671, 2698, 3569, 3672, 3764 |
| HpyCH4IV | ACGT | 8 cut(s) | 285, 625, 1152, 1721, 2615, 2893, 3418, 3561 |
| HpySE526I | ACGT | 8 cut(s) | 285, 625, 1152, 1721, 2615, 2893, 3418, 3561 |
| Hsp92I | GRCGYC | 2 cut(s) | 511, 1253 |
| HspAI | GCGC | 1 cut(s) | 1253 |
| KasI | GGCGCC | 1 cut(s) | 1252 |
| KflI | GGGWCCC | 1 cut(s) | 2149 |
| Ksp22I | TGATCA | 3 cut(s) | 190, 562, 1020 |
| LmnI | GCTCC | 6 cut(s) | 768, 821, 1354, 2119, 2646, 2842 |
| Lsp1109I | GCAGC | 5 cut(s) | 2013, 2891, 3130, 3358, 3361 |
| LweI | GCATC | 3 cut(s) | 1027, 2542, 3226 |
| MaeII | ACGT | 8 cut(s) | 285, 625, 1152, 1721, 2615, 2893, 3418, 3561 |
| MbiI | CCGCTC | 1 cut(s) | 1357 |
| MflI | RGATCY | 4 cut(s) | 1047, 1923, 2289, 2731 |
| MhlI | GDGCHC | 3 cut(s) | 877, 1939, 3382 |
| MlsI | TGGCCA | 1 cut(s) | 3902 |
| MluNI | TGGCCA | 1 cut(s) | 3902 |
| Mly113I | GGCGCC | 1 cut(s) | 1253 |
| MlyI | GAGTC | 8 cut(s) | 102, 262, 566, 761, 1402, 1823, 2562, 3763 |
| MmeI | TCCRAC | 5 cut(s) | 561, 1485, 1584, 2072, 3716 |
| Mox20I | TGGCCA | 1 cut(s) | 3902 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 3684 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1143 |
| MscI | TGGCCA | 1 cut(s) | 3902 |
| MslI | CAYNNNNRTG | 4 cut(s) | 165, 423, 990, 1911 |
| Msp20I | TGGCCA | 1 cut(s) | 3902 |
| MspCI | CTTAAG | 1 cut(s) | 1637 |
| MspI | CCGG | 3 cut(s) | 1003, 2549, 3036 |
| MspR9I | CCNGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| Mva1269I | GAATGC | 1 cut(s) | 1228 |
| MvaI | CCWGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| MvnI | CGCG | 1 cut(s) | 940 |
| NarI | GGCGCC | 1 cut(s) | 1253 |
| NdeI | CATATG | 4 cut(s) | 1660, 3107, 3657, 3684 |
| NheI | GCTAGC | 1 cut(s) | 2122 |
| NlaIV | GGNNCC | 4 cut(s) | 1254, 2150, 2151, 3084 |
| NmuCI | GTSAC | 6 cut(s) | 281, 1165, 2044, 3425, 3758, 3836 |
| NsiI | ATGCAT | 2 cut(s) | 6, 3684 |
| NspI | RCATGY | 4 cut(s) | 1135, 2612, 2849, 2959 |
| NspV | TTCGAA | 1 cut(s) | 358 |
| PagI | TCATGA | 1 cut(s) | 738 |
| PceI | AGGCCT | 2 cut(s) | 2175, 2764 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 857 |
| PctI | GAATGC | 1 cut(s) | 1228 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1143 |
| PfeI | GAWTC | 7 cut(s) | 210, 355, 1144, 1346, 1393, 1423, 1970 |
| PfoI | TCCNGGA | 2 cut(s) | 390, 3576 |
| PkrI | GCNGC | 5 cut(s) | 2028, 2881, 3145, 3348, 3351 |
| PleI | GAGTC | 8 cut(s) | 101, 261, 565, 760, 1402, 1823, 2562, 3763 |
| PluTI | GGCGCC | 1 cut(s) | 1256 |
| PpsI | GAGTC | 8 cut(s) | 101, 261, 565, 760, 1402, 1823, 2562, 3763 |
| Ppu21I | YACGTR | 2 cut(s) | 2616, 2894 |
| PpuMI | RGGWCCY | 1 cut(s) | 2149 |
| Psp124BI | GAGCTC | 1 cut(s) | 877 |
| Psp5II | RGGWCCY | 1 cut(s) | 2149 |
| Psp6I | CCWGG | 7 cut(s) | 390, 746, 1255, 1543, 2144, 2438, 3576 |
| PspEI | GGTNACC | 1 cut(s) | 2140 |
| PspFI | CCCAGC | 3 cut(s) | 687, 865, 2134 |
| PspGI | CCWGG | 7 cut(s) | 390, 746, 1255, 1543, 2144, 2438, 3576 |
| PspN4I | GGNNCC | 4 cut(s) | 1254, 2150, 2151, 3084 |
| PspPI | GGNCC | 4 cut(s) | 428, 1259, 2149, 3481 |
| PspPPI | RGGWCCY | 1 cut(s) | 2149 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2597 |
| PsuI | RGATCY | 4 cut(s) | 1047, 1923, 2289, 2731 |
| RsaI | GTAC | 3 cut(s) | 1323, 2016, 2919 |
| RsaNI | GTAC | 3 cut(s) | 1322, 2015, 2918 |
| RseI | CAYNNNNRTG | 4 cut(s) | 165, 423, 990, 1911 |
| SacI | GAGCTC | 1 cut(s) | 877 |
| SalI | GTCGAC | 1 cut(s) | 3563 |
| SatI | GCNGC | 5 cut(s) | 2027, 2880, 3144, 3347, 3350 |
| Sau96I | GGNCC | 4 cut(s) | 428, 1259, 2149, 3481 |
| SchI | GAGTC | 8 cut(s) | 102, 262, 566, 761, 1402, 1823, 2562, 3763 |
| ScrFI | CCNGG | 7 cut(s) | 392, 748, 1257, 1545, 2146, 2440, 3578 |
| SduI | GDGCHC | 3 cut(s) | 877, 1939, 3382 |
| SfaNI | GCATC | 3 cut(s) | 1027, 2542, 3226 |
| SfcI | CTRYAG | 1 cut(s) | 1170 |
| SfoI | GGCGCC | 1 cut(s) | 1254 |
| SfuI | TTCGAA | 1 cut(s) | 358 |
| SgrDI | CGTCGACG | 1 cut(s) | 3563 |
| SinI | GGWCC | 3 cut(s) | 1259, 2149, 3481 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 165, 423, 990, 1911 |
| SmlI | CTYRAG | 2 cut(s) | 1637, 2030 |
| SmoI | CTYRAG | 2 cut(s) | 1637, 2030 |
| SnaBI | TACGTA | 1 cut(s) | 2894 |
| SseBI | AGGCCT | 2 cut(s) | 2175, 2764 |
| SsiI | CCGC | 6 cut(s) | 1040, 1357, 1603, 2279, 2303, 3543 |
| SspDI | GGCGCC | 1 cut(s) | 1252 |
| SspI | AATATT | 2 cut(s) | 2168, 3056 |
| SstI | GAGCTC | 1 cut(s) | 877 |
| StuI | AGGCCT | 2 cut(s) | 2175, 2764 |
| StyD4I | CCNGG | 7 cut(s) | 390, 746, 1255, 1543, 2144, 2438, 3576 |
| StyI | CCWWGG | 1 cut(s) | 2735 |
| TaaI | ACNGT | 9 cut(s) | 281, 673, 1756, 2014, 2671, 2698, 3569, 3672, 3764 |
| TaiI | ACGT | 8 cut(s) | 288, 628, 1155, 1724, 2618, 2896, 3421, 3564 |
| TaqI | TCGA | 6 cut(s) | 358, 530, 1644, 2343, 3523, 3564 |
| TaqII | GACCGA | 1 cut(s) | 1450 |
| TatI | WGTACW | 2 cut(s) | 1321, 2917 |
| TfiI | GAWTC | 7 cut(s) | 210, 355, 1144, 1346, 1393, 1423, 1970 |
| TscAI | CASTG | 7 cut(s) | 200, 333, 1761, 2274, 2435, 2703, 3243 |
| TseFI | GTSAC | 6 cut(s) | 281, 1165, 2044, 3425, 3758, 3836 |
| TseI | GCWGC | 5 cut(s) | 2026, 2879, 3143, 3346, 3349 |
| Tsp45I | GTSAC | 6 cut(s) | 281, 1165, 2044, 3425, 3758, 3836 |
| TspRI | CASTG | 7 cut(s) | 200, 333, 1761, 2274, 2435, 2703, 3243 |
| Vha464I | CTTAAG | 1 cut(s) | 1637 |
| VpaK11BI | GGWCC | 3 cut(s) | 1259, 2149, 3481 |
| XapI | RAATTY | 5 cut(s) | 376, 779, 787, 2062, 3158 |
| XbaI | TCTAGA | 1 cut(s) | 2104 |
| XceI | RCATGY | 4 cut(s) | 1135, 2612, 2849, 2959 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 438, 2637 |
| XmiI | GTMKAC | 2 cut(s) | 2566, 3564 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1143 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 3684 |