Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 232 |
| AcsI | RAATTY | 1 cut(s) | 341 |
| AfaI | GTAC | 1 cut(s) | 246 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 32 |
| AflIII | ACRYGT | 1 cut(s) | 250 |
| AluBI | AGCT | 4 cut(s) | 116, 353, 365, 370 |
| AluI | AGCT | 4 cut(s) | 116, 353, 365, 370 |
| Alw21I | GWGCWC | 1 cut(s) | 102 |
| Alw44I | GTGCAC | 1 cut(s) | 98 |
| AoxI | GGCC | 1 cut(s) | 23 |
| ApaLI | GTGCAC | 1 cut(s) | 98 |
| ApeKI | GCWGC | 2 cut(s) | 353, 362 |
| ApoI | RAATTY | 1 cut(s) | 341 |
| BaeGI | GKGCMC | 1 cut(s) | 102 |
| BauI | CACGAG | 1 cut(s) | 101 |
| Bbv12I | GWGCWC | 1 cut(s) | 102 |
| BbvI | GCAGC | 2 cut(s) | 340, 374 |
| BfaI | CTAG | 2 cut(s) | 83, 113 |
| BfuAI | ACCTGC | 1 cut(s) | 232 |
| BisI | GCNGC | 2 cut(s) | 354, 363 |
| BlpI | GCTNAGC | 1 cut(s) | 366 |
| BlsI | GCNGC | 2 cut(s) | 355, 364 |
| BmrI | ACTGGG | 1 cut(s) | 197 |
| BmsI | GCATC | 1 cut(s) | 121 |
| BmuI | ACTGGG | 1 cut(s) | 197 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 366 |
| BsaAI | YACGTR | 1 cut(s) | 253 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 32 |
| Bse1I | ACTGG | 2 cut(s) | 126, 192 |
| Bse3DI | GCAATG | 1 cut(s) | 158 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseMI | GCAATG | 1 cut(s) | 158 |
| BseMII | CTCAG | 2 cut(s) | 39, 357 |
| BseNI | ACTGG | 2 cut(s) | 126, 192 |
| BseSI | GKGCMC | 1 cut(s) | 102 |
| BseXI | GCAGC | 2 cut(s) | 340, 374 |
| BsgI | GTGCAG | 1 cut(s) | 260 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BsiHKAI | GWGCWC | 1 cut(s) | 102 |
| BslFI | GGGAC | 1 cut(s) | 320 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 320 |
| BsmI | GAATGC | 2 cut(s) | 52, 322 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 1 cut(s) | 102 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 366 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspCNI | CTCAG | 2 cut(s) | 40, 358 |
| BspMI | ACCTGC | 1 cut(s) | 232 |
| BsrDI | GCAATG | 1 cut(s) | 158 |
| BsrI | ACTGG | 2 cut(s) | 126, 192 |
| BssSI | CACGAG | 1 cut(s) | 101 |
| Bst2BI | CACGAG | 1 cut(s) | 101 |
| BstBAI | YACGTR | 1 cut(s) | 253 |
| BstC8I | GCNNGC | 1 cut(s) | 70 |
| BstDEI | CTNAG | 3 cut(s) | 48, 64, 366 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 221, 359, 362 |
| BstNSI | RCATGY | 1 cut(s) | 72 |
| BstSLI | GKGCMC | 1 cut(s) | 102 |
| BstV1I | GCAGC | 2 cut(s) | 340, 374 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| BveI | ACCTGC | 1 cut(s) | 232 |
| Cac8I | GCNNGC | 1 cut(s) | 70 |
| Csp6I | GTAC | 1 cut(s) | 245 |
| CviAII | CATG | 2 cut(s) | 69, 164 |
| CviJI | RGCY | 8 cut(s) | 25, 36, 116, 215, 290, 353, 365, 370 |
| CviKI_1 | RGCY | 8 cut(s) | 25, 36, 116, 215, 290, 353, 365, 370 |
| CviQI | GTAC | 1 cut(s) | 245 |
| DdeI | CTNAG | 3 cut(s) | 48, 64, 366 |
| FaeI | CATG | 2 cut(s) | 72, 167 |
| FaiI | YATR | 6 cut(s) | 70, 119, 137, 165, 199, 201 |
| FaqI | GGGAC | 1 cut(s) | 320 |
| FatI | CATG | 2 cut(s) | 68, 163 |
| Fnu4HI | GCNGC | 2 cut(s) | 354, 363 |
| Fsp4HI | GCNGC | 2 cut(s) | 354, 363 |
| FspBI | CTAG | 2 cut(s) | 83, 113 |
| GluI | GCNGC | 2 cut(s) | 354, 363 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| Hin1II | CATG | 2 cut(s) | 72, 167 |
| Hpy166II | GTNNAC | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 2 cut(s) | 49, 58 |
| Hpy188III | TCNNGA | 1 cut(s) | 229 |
| Hpy8I | GTNNAC | 1 cut(s) | 100 |
| HpyCH4IV | ACGT | 1 cut(s) | 252 |
| HpyCH4V | TGCA | 6 cut(s) | 72, 80, 100, 163, 241, 362 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 221, 359, 362 |
| HpyF3I | CTNAG | 3 cut(s) | 48, 64, 366 |
| HpySE526I | ACGT | 1 cut(s) | 252 |
| Hsp92II | CATG | 2 cut(s) | 72, 167 |
| LpnPI | CCDG | 7 cut(s) | 107, 173, 178, 227, 242, 326, 351 |
| Lsp1109I | GCAGC | 2 cut(s) | 340, 374 |
| LweI | GCATC | 1 cut(s) | 121 |
| MaeI | CTAG | 2 cut(s) | 83, 113 |
| MaeII | ACGT | 1 cut(s) | 252 |
| MaeIII | GTNAC | 1 cut(s) | 274 |
| MboII | GAAGA | 1 cut(s) | 36 |
| MhlI | GDGCHC | 1 cut(s) | 102 |
| MluCI | AATT | 1 cut(s) | 341 |
| MnlI | CCTC | 2 cut(s) | 8, 133 |
| MspA1I | CMGCKG | 1 cut(s) | 365 |
| Mva1269I | GAATGC | 2 cut(s) | 52, 322 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 221, 359, 362 |
| NlaIII | CATG | 2 cut(s) | 72, 167 |
| NspI | RCATGY | 1 cut(s) | 72 |
| PaeI | GCATGC | 1 cut(s) | 72 |
| PctI | GAATGC | 2 cut(s) | 52, 322 |
| PkrI | GCNGC | 2 cut(s) | 355, 364 |
| Ppu21I | YACGTR | 1 cut(s) | 253 |
| PvuII | CAGCTG | 1 cut(s) | 365 |
| RsaI | GTAC | 1 cut(s) | 246 |
| RsaNI | GTAC | 1 cut(s) | 245 |
| SatI | GCNGC | 2 cut(s) | 354, 363 |
| SduI | GDGCHC | 1 cut(s) | 102 |
| SfaNI | GCATC | 1 cut(s) | 121 |
| SphI | GCATGC | 1 cut(s) | 72 |
| Sse9I | AATT | 1 cut(s) | 341 |
| SspMI | CTAG | 2 cut(s) | 83, 113 |
| TaiI | ACGT | 1 cut(s) | 255 |
| TasI | AATT | 1 cut(s) | 341 |
| TseI | GCWGC | 2 cut(s) | 353, 362 |
| TspDTI | ATGAA | 3 cut(s) | 134, 147, 180 |
| VneI | GTGCAC | 1 cut(s) | 98 |
| XapI | RAATTY | 1 cut(s) | 341 |
| XceI | RCATGY | 1 cut(s) | 72 |
| XspI | CTAG | 2 cut(s) | 83, 113 |