Topless-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 185 |
| AciI | CCGC | 1 cut(s) | 328 |
| AcsI | RAATTY | 2 cut(s) | 132, 197 |
| AcyI | GRCGYC | 1 cut(s) | 180 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 176, 241 |
| AjnI | CCWGG | 1 cut(s) | 261 |
| AoxI | GGCC | 2 cut(s) | 232, 259 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| ApoI | RAATTY | 2 cut(s) | 132, 197 |
| AspLEI | GCGC | 1 cut(s) | 187 |
| AspS9I | GGNCC | 1 cut(s) | 232 |
| AsuHPI | GGTGA | 1 cut(s) | 71 |
| BbsI | GAAGAC | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 28 |
| BccI | CCATC | 2 cut(s) | 243, 318 |
| BceAI | ACGGC | 1 cut(s) | 274 |
| BciT130I | CCWGG | 1 cut(s) | 263 |
| BglII | AGATCT | 1 cut(s) | 220 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| Bme1390I | CCNGG | 1 cut(s) | 263 |
| BmgT120I | GGNCC | 1 cut(s) | 232 |
| BmrFI | CCNGG | 1 cut(s) | 263 |
| BmrI | ACTGGG | 1 cut(s) | 199 |
| BmuI | ACTGGG | 1 cut(s) | 199 |
| BpiI | GAAGAC | 1 cut(s) | 155 |
| BsaHI | GRCGYC | 1 cut(s) | 180 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 176, 241 |
| Bse1I | ACTGG | 1 cut(s) | 205 |
| BseBI | CCWGG | 1 cut(s) | 263 |
| BseGI | GGATG | 1 cut(s) | 329 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 176, 241 |
| BseMII | CTCAG | 2 cut(s) | 84, 325 |
| BseNI | ACTGG | 1 cut(s) | 205 |
| BseRI | GAGGAG | 2 cut(s) | 257, 260 |
| BseXI | GCAGC | 1 cut(s) | 28 |
| Bsh1236I | CGCG | 1 cut(s) | 185 |
| BshFI | GGCC | 2 cut(s) | 234, 261 |
| BsiSI | CCGG | 1 cut(s) | 82 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 176, 241 |
| BsnI | GGCC | 2 cut(s) | 234, 261 |
| Bsp143I | GATC | 2 cut(s) | 220, 307 |
| BspACI | CCGC | 1 cut(s) | 328 |
| BspANI | GGCC | 2 cut(s) | 234, 261 |
| BspCNI | CTCAG | 2 cut(s) | 83, 324 |
| BspFNI | CGCG | 1 cut(s) | 185 |
| BspHI | TCATGA | 2 cut(s) | 148, 238 |
| BsrI | ACTGG | 1 cut(s) | 205 |
| BssMI | GATC | 2 cut(s) | 220, 307 |
| BssNI | GRCGYC | 1 cut(s) | 180 |
| Bst2UI | CCWGG | 1 cut(s) | 263 |
| Bst4CI | ACNGT | 2 cut(s) | 98, 161 |
| BstACI | GRCGYC | 1 cut(s) | 180 |
| BstC8I | GCNNGC | 1 cut(s) | 114 |
| BstDEI | CTNAG | 2 cut(s) | 70, 311 |
| BstF5I | GGATG | 1 cut(s) | 329 |
| BstFNI | CGCG | 1 cut(s) | 185 |
| BstHHI | GCGC | 1 cut(s) | 187 |
| BstKTI | GATC | 2 cut(s) | 223, 310 |
| BstMBI | GATC | 2 cut(s) | 220, 307 |
| BstNI | CCWGG | 1 cut(s) | 263 |
| BstNSI | RCATGY | 1 cut(s) | 112 |
| BstSCI | CCNGG | 1 cut(s) | 261 |
| BstUI | CGCG | 1 cut(s) | 185 |
| BstV1I | GCAGC | 1 cut(s) | 28 |
| BstV2I | GAAGAC | 1 cut(s) | 155 |
| BstX2I | RGATCY | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 220 |
| BsuRI | GGCC | 2 cut(s) | 234, 261 |
| BtsCI | GGATG | 1 cut(s) | 329 |
| BtsI | GCAGTG | 1 cut(s) | 322 |
| BtsIMutI | CAGTG | 2 cut(s) | 212, 322 |
| Cac8I | GCNNGC | 1 cut(s) | 114 |
| CciI | TCATGA | 2 cut(s) | 148, 238 |
| CfoI | GCGC | 1 cut(s) | 187 |
| Cfr13I | GGNCC | 1 cut(s) | 232 |
| CseI | GACGC | 2 cut(s) | 169, 284 |
| CviAII | CATG | 7 cut(s) | 13, 109, 149, 173, 194, 239, 272 |
| CviJI | RGCY | 5 cut(s) | 41, 81, 234, 261, 333 |
| CviKI_1 | RGCY | 5 cut(s) | 41, 81, 234, 261, 333 |
| DdeI | CTNAG | 2 cut(s) | 70, 311 |
| DpnI | GATC | 2 cut(s) | 222, 309 |
| DpnII | GATC | 2 cut(s) | 220, 307 |
| EcoRI | GAATTC | 1 cut(s) | 132 |
| EcoRII | CCWGG | 1 cut(s) | 261 |
| FaeI | CATG | 7 cut(s) | 16, 112, 152, 176, 197, 242, 275 |
| FaiI | YATR | 8 cut(s) | 14, 32, 110, 150, 174, 195, 240, 273 |
| FatI | CATG | 7 cut(s) | 12, 108, 148, 172, 193, 238, 271 |
| FauI | CCCGC | 1 cut(s) | 321 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| GlaI | GCGC | 1 cut(s) | 186 |
| GluI | GCNGC | 1 cut(s) | 42 |
| HaeIII | GGCC | 2 cut(s) | 234, 261 |
| HapII | CCGG | 1 cut(s) | 82 |
| HgaI | GACGC | 2 cut(s) | 169, 284 |
| HhaI | GCGC | 1 cut(s) | 187 |
| Hin1I | GRCGYC | 1 cut(s) | 180 |
| Hin1II | CATG | 7 cut(s) | 16, 112, 152, 176, 197, 242, 275 |
| Hin6I | GCGC | 1 cut(s) | 185 |
| HinP1I | GCGC | 1 cut(s) | 185 |
| HinfI | GANTC | 2 cut(s) | 23, 85 |
| HpaII | CCGG | 1 cut(s) | 82 |
| HphI | GGTGA | 1 cut(s) | 71 |
| Hpy166II | GTNNAC | 1 cut(s) | 10 |
| Hpy188I | TCNGA | 1 cut(s) | 73 |
| Hpy188III | TCNNGA | 4 cut(s) | 89, 149, 239, 305 |
| Hpy8I | GTNNAC | 1 cut(s) | 10 |
| Hpy99I | CGWCG | 2 cut(s) | 185, 300 |
| HpyAV | CCTTC | 1 cut(s) | 311 |
| HpyCH4III | ACNGT | 2 cut(s) | 98, 161 |
| HpyCH4V | TGCA | 1 cut(s) | 112 |
| HpyF3I | CTNAG | 2 cut(s) | 70, 311 |
| Hsp92I | GRCGYC | 1 cut(s) | 180 |
| Hsp92II | CATG | 7 cut(s) | 16, 112, 152, 176, 197, 242, 275 |
| HspAI | GCGC | 1 cut(s) | 185 |
| Kzo9I | GATC | 2 cut(s) | 220, 307 |
| LpnPI | CCDG | 6 cut(s) | 42, 95, 218, 248, 263, 275 |
| Lsp1109I | GCAGC | 1 cut(s) | 28 |
| MaeIII | GTNAC | 1 cut(s) | 59 |
| MalI | GATC | 2 cut(s) | 222, 309 |
| MboI | GATC | 2 cut(s) | 220, 307 |
| MboII | GAAGA | 2 cut(s) | 18, 155 |
| MflI | RGATCY | 1 cut(s) | 220 |
| MluCI | AATT | 3 cut(s) | 132, 197, 251 |
| MnlI | CCTC | 7 cut(s) | 67, 180, 223, 235, 238, 241, 313 |
| MspI | CCGG | 1 cut(s) | 82 |
| MspR9I | CCNGG | 1 cut(s) | 263 |
| MvaI | CCWGG | 1 cut(s) | 263 |
| MvnI | CGCG | 1 cut(s) | 185 |
| NdeII | GATC | 2 cut(s) | 220, 307 |
| NlaIII | CATG | 7 cut(s) | 16, 112, 152, 176, 197, 242, 275 |
| NmuCI | GTSAC | 1 cut(s) | 59 |
| NspI | RCATGY | 1 cut(s) | 112 |
| PagI | TCATGA | 2 cut(s) | 148, 238 |
| PfeI | GAWTC | 2 cut(s) | 23, 85 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| Psp6I | CCWGG | 1 cut(s) | 261 |
| PspGI | CCWGG | 1 cut(s) | 261 |
| PspPI | GGNCC | 1 cut(s) | 232 |
| PsuI | RGATCY | 1 cut(s) | 220 |
| SatI | GCNGC | 1 cut(s) | 42 |
| Sau3AI | GATC | 2 cut(s) | 220, 307 |
| Sau96I | GGNCC | 1 cut(s) | 232 |
| ScrFI | CCNGG | 1 cut(s) | 263 |
| SetI | ASST | 4 cut(s) | 9, 61, 78, 282 |
| Sse9I | AATT | 3 cut(s) | 132, 197, 251 |
| SsiI | CCGC | 1 cut(s) | 328 |
| StyD4I | CCNGG | 1 cut(s) | 261 |
| TaaI | ACNGT | 2 cut(s) | 98, 161 |
| TaqI | TCGA | 4 cut(s) | 136, 228, 282, 306 |
| TasI | AATT | 3 cut(s) | 132, 197, 251 |
| TfiI | GAWTC | 2 cut(s) | 23, 85 |
| TscAI | CASTG | 2 cut(s) | 212, 322 |
| TseFI | GTSAC | 1 cut(s) | 59 |
| TseI | GCWGC | 1 cut(s) | 41 |
| Tsp45I | GTSAC | 1 cut(s) | 59 |
| TspDTI | ATGAA | 2 cut(s) | 165, 210 |
| TspRI | CASTG | 2 cut(s) | 212, 322 |
| XapI | RAATTY | 2 cut(s) | 132, 197 |
| XceI | RCATGY | 1 cut(s) | 112 |