Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 90, 271 |
| AccII | CGCG | 1 cut(s) | 47 |
| AciI | CCGC | 1 cut(s) | 47 |
| AfaI | GTAC | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 90, 185, 186, 271 |
| AgsI | TTSAA | 2 cut(s) | 290, 390 |
| AluBI | AGCT | 4 cut(s) | 103, 175, 199, 377 |
| AluI | AGCT | 4 cut(s) | 103, 175, 199, 377 |
| Alw26I | GTCTC | 3 cut(s) | 184, 221, 321 |
| Ama87I | CYCGRG | 1 cut(s) | 181 |
| ApeKI | GCWGC | 1 cut(s) | 175 |
| AsuHPI | GGTGA | 3 cut(s) | 163, 254, 319 |
| AvaI | CYCGRG | 1 cut(s) | 181 |
| BbvI | GCAGC | 1 cut(s) | 162 |
| BcoDI | GTCTC | 3 cut(s) | 184, 221, 321 |
| BfaI | CTAG | 1 cut(s) | 462 |
| BisI | GCNGC | 1 cut(s) | 176 |
| BlsI | GCNGC | 1 cut(s) | 177 |
| BmeT110I | CYCGRG | 1 cut(s) | 181 |
| BmsI | GCATC | 3 cut(s) | 112, 202, 304 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 231, 263 |
| BpuEI | CTTGAG | 1 cut(s) | 179 |
| BsaAI | YACGTR | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 2 cut(s) | 182, 303 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 90, 185, 186, 271 |
| BseDI | CCNNGG | 2 cut(s) | 182, 303 |
| BseGI | GGATG | 1 cut(s) | 359 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 90, 185, 186, 271 |
| BseMII | CTCAG | 1 cut(s) | 336 |
| BseXI | GCAGC | 1 cut(s) | 162 |
| Bsh1236I | CGCG | 1 cut(s) | 47 |
| BsiHKCI | CYCGRG | 1 cut(s) | 181 |
| BslFI | GGGAC | 1 cut(s) | 73 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 90, 185, 186, 271 |
| BsmAI | GTCTC | 3 cut(s) | 184, 221, 321 |
| BsmFI | GGGAC | 1 cut(s) | 73 |
| BsmI | GAATGC | 1 cut(s) | 385 |
| BsoBI | CYCGRG | 1 cut(s) | 181 |
| Bsp19I | CCATGG | 1 cut(s) | 303 |
| BspACI | CCGC | 1 cut(s) | 47 |
| BspCNI | CTCAG | 1 cut(s) | 337 |
| BspFNI | CGCG | 1 cut(s) | 47 |
| BspHI | TCATGA | 1 cut(s) | 118 |
| BssECI | CCNNGG | 2 cut(s) | 182, 303 |
| BssT1I | CCWWGG | 1 cut(s) | 303 |
| Bst4CI | ACNGT | 1 cut(s) | 299 |
| Bst6I | CTCTTC | 1 cut(s) | 140 |
| BstBAI | YACGTR | 1 cut(s) | 38 |
| BstDEI | CTNAG | 3 cut(s) | 99, 345, 475 |
| BstDSI | CCRYGG | 1 cut(s) | 303 |
| BstF5I | GGATG | 1 cut(s) | 359 |
| BstFNI | CGCG | 1 cut(s) | 47 |
| BstMAI | GTCTC | 3 cut(s) | 184, 221, 321 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 458 |
| BstNSI | RCATGY | 1 cut(s) | 13 |
| BstUI | CGCG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 162 |
| BtgI | CCRYGG | 1 cut(s) | 303 |
| BtsCI | GGATG | 1 cut(s) | 359 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| CciI | TCATGA | 1 cut(s) | 118 |
| CseI | GACGC | 1 cut(s) | 53 |
| Csp6I | GTAC | 1 cut(s) | 300 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 417, 452 |
| CviAII | CATG | 3 cut(s) | 10, 119, 304 |
| CviJI | RGCY | 7 cut(s) | 23, 95, 103, 175, 199, 377, 452 |
| CviKI_1 | RGCY | 7 cut(s) | 23, 95, 103, 175, 199, 377, 452 |
| CviQI | GTAC | 1 cut(s) | 300 |
| DdeI | CTNAG | 3 cut(s) | 99, 345, 475 |
| Eam1104I | CTCTTC | 1 cut(s) | 140 |
| EarI | CTCTTC | 1 cut(s) | 140 |
| Eco130I | CCWWGG | 1 cut(s) | 303 |
| Eco88I | CYCGRG | 1 cut(s) | 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 303 |
| EcoT22I | ATGCAT | 1 cut(s) | 15 |
| ErhI | CCWWGG | 1 cut(s) | 303 |
| FaeI | CATG | 3 cut(s) | 13, 122, 307 |
| FaiI | YATR | 7 cut(s) | 11, 28, 120, 236, 272, 305, 444 |
| FaqI | GGGAC | 1 cut(s) | 73 |
| FatI | CATG | 3 cut(s) | 9, 118, 303 |
| Fnu4HI | GCNGC | 1 cut(s) | 176 |
| FokI | GGATG | 1 cut(s) | 366 |
| Fsp4HI | GCNGC | 1 cut(s) | 176 |
| FspBI | CTAG | 1 cut(s) | 462 |
| GluI | GCNGC | 1 cut(s) | 176 |
| HgaI | GACGC | 1 cut(s) | 53 |
| Hin1II | CATG | 3 cut(s) | 13, 122, 307 |
| HindIII | AAGCTT | 1 cut(s) | 375 |
| HinfI | GANTC | 2 cut(s) | 192, 246 |
| HphI | GGTGA | 3 cut(s) | 163, 254, 319 |
| Hpy166II | GTNNAC | 1 cut(s) | 283 |
| Hpy188I | TCNGA | 1 cut(s) | 346 |
| Hpy188III | TCNNGA | 4 cut(s) | 52, 119, 136, 422 |
| Hpy8I | GTNNAC | 1 cut(s) | 283 |
| HpyAV | CCTTC | 2 cut(s) | 49, 405 |
| HpyCH4III | ACNGT | 1 cut(s) | 299 |
| HpyCH4IV | ACGT | 2 cut(s) | 37, 279 |
| HpyCH4V | TGCA | 4 cut(s) | 13, 109, 317, 385 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 458 |
| HpyF3I | CTNAG | 3 cut(s) | 99, 345, 475 |
| HpySE526I | ACGT | 2 cut(s) | 37, 279 |
| Hsp92II | CATG | 3 cut(s) | 13, 122, 307 |
| LpnPI | CCDG | 2 cut(s) | 37, 144 |
| Lsp1109I | GCAGC | 1 cut(s) | 162 |
| LweI | GCATC | 3 cut(s) | 112, 202, 304 |
| MaeI | CTAG | 1 cut(s) | 462 |
| MaeII | ACGT | 2 cut(s) | 37, 279 |
| MboII | GAAGA | 3 cut(s) | 157, 347, 390 |
| MluCI | AATT | 1 cut(s) | 390 |
| MlyI | GAGTC | 2 cut(s) | 186, 240 |
| MnlI | CCTC | 5 cut(s) | 141, 147, 177, 340, 358 |
| Mph1103I | ATGCAT | 1 cut(s) | 15 |
| MseI | TTAA | 3 cut(s) | 78, 321, 484 |
| Mva1269I | GAATGC | 1 cut(s) | 385 |
| MvnI | CGCG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 458 |
| NcoI | CCATGG | 1 cut(s) | 303 |
| NlaIII | CATG | 3 cut(s) | 13, 122, 307 |
| NsiI | ATGCAT | 1 cut(s) | 15 |
| NspI | RCATGY | 1 cut(s) | 13 |
| PagI | TCATGA | 1 cut(s) | 118 |
| PctI | GAATGC | 1 cut(s) | 385 |
| PflFI | GACNNNGTC | 1 cut(s) | 47 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 90, 271 |
| PkrI | GCNGC | 1 cut(s) | 177 |
| PleI | GAGTC | 2 cut(s) | 186, 240 |
| PpsI | GAGTC | 2 cut(s) | 186, 240 |
| Ppu21I | YACGTR | 1 cut(s) | 38 |
| PsyI | GACNNNGTC | 1 cut(s) | 47 |
| RsaI | GTAC | 1 cut(s) | 301 |
| RsaNI | GTAC | 1 cut(s) | 300 |
| SaqAI | TTAA | 3 cut(s) | 78, 321, 484 |
| SatI | GCNGC | 1 cut(s) | 176 |
| SchI | GAGTC | 2 cut(s) | 186, 240 |
| SetI | ASST | 7 cut(s) | 40, 105, 177, 201, 282, 351, 379 |
| SfaNI | GCATC | 3 cut(s) | 112, 202, 304 |
| SmlI | CTYRAG | 1 cut(s) | 194 |
| SmoI | CTYRAG | 1 cut(s) | 194 |
| Sse9I | AATT | 1 cut(s) | 390 |
| SsiI | CCGC | 1 cut(s) | 47 |
| SspMI | CTAG | 1 cut(s) | 462 |
| StyI | CCWWGG | 1 cut(s) | 303 |
| TaaI | ACNGT | 1 cut(s) | 299 |
| TaiI | ACGT | 2 cut(s) | 40, 282 |
| TasI | AATT | 1 cut(s) | 390 |
| Tru1I | TTAA | 3 cut(s) | 78, 321, 484 |
| Tru9I | TTAA | 3 cut(s) | 78, 321, 484 |
| TscAI | CASTG | 1 cut(s) | 211 |
| TseI | GCWGC | 1 cut(s) | 175 |
| TspDTI | ATGAA | 1 cut(s) | 390 |
| TspGWI | ACGGA | 1 cut(s) | 308 |
| TspRI | CASTG | 1 cut(s) | 211 |
| Tth111I | GACNNNGTC | 1 cut(s) | 47 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 90, 271 |
| XceI | RCATGY | 1 cut(s) | 13 |
| XspI | CTAG | 1 cut(s) | 462 |
| Zsp2I | ATGCAT | 1 cut(s) | 15 |