Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 5, 44, 119 |
| AfaI | GTAC | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 34 |
| AluBI | AGCT | 3 cut(s) | 78, 155, 188 |
| AluI | AGCT | 3 cut(s) | 78, 155, 188 |
| ApeKI | GCWGC | 1 cut(s) | 152 |
| AspS9I | GGNCC | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| AvaII | GGWCC | 1 cut(s) | 46 |
| BbsI | GAAGAC | 1 cut(s) | 215 |
| BbvI | GCAGC | 1 cut(s) | 164 |
| BccI | CCATC | 1 cut(s) | 98 |
| BceAI | ACGGC | 1 cut(s) | 57 |
| BfaI | CTAG | 1 cut(s) | 162 |
| BisI | GCNGC | 1 cut(s) | 153 |
| BlsI | GCNGC | 1 cut(s) | 154 |
| Bme18I | GGWCC | 1 cut(s) | 46 |
| BmgT120I | GGNCC | 1 cut(s) | 46 |
| BoxI | GACNNNNGTC | 1 cut(s) | 44 |
| BpiI | GAAGAC | 1 cut(s) | 215 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 257 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 34 |
| Bse1I | ACTGG | 1 cut(s) | 223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 34 |
| BseNI | ACTGG | 1 cut(s) | 223 |
| BseRI | GAGGAG | 1 cut(s) | 157 |
| BseXI | GCAGC | 1 cut(s) | 164 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 34 |
| Bsp1407I | TGTACA | 1 cut(s) | 172 |
| BspACI | CCGC | 3 cut(s) | 5, 44, 119 |
| BsrGI | TGTACA | 1 cut(s) | 172 |
| BsrI | ACTGG | 1 cut(s) | 223 |
| BstAUI | TGTACA | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 158, 185 |
| BstNSI | RCATGY | 1 cut(s) | 179 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 44 |
| BstV1I | GCAGC | 1 cut(s) | 164 |
| BstV2I | GAAGAC | 1 cut(s) | 215 |
| Cfr13I | GGNCC | 1 cut(s) | 46 |
| Csp6I | GTAC | 1 cut(s) | 173 |
| CviAII | CATG | 1 cut(s) | 176 |
| CviJI | RGCY | 4 cut(s) | 78, 155, 161, 188 |
| CviKI_1 | RGCY | 4 cut(s) | 78, 155, 161, 188 |
| CviQI | GTAC | 1 cut(s) | 173 |
| Eco47I | GGWCC | 1 cut(s) | 46 |
| FaeI | CATG | 1 cut(s) | 179 |
| FaiI | YATR | 2 cut(s) | 177, 197 |
| FatI | CATG | 1 cut(s) | 175 |
| Fnu4HI | GCNGC | 1 cut(s) | 153 |
| Fsp4HI | GCNGC | 1 cut(s) | 153 |
| FspBI | CTAG | 1 cut(s) | 162 |
| GluI | GCNGC | 1 cut(s) | 153 |
| Hin1II | CATG | 1 cut(s) | 179 |
| HindIII | AAGCTT | 1 cut(s) | 76 |
| HinfI | GANTC | 1 cut(s) | 272 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| HpyCH4V | TGCA | 1 cut(s) | 179 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 158, 185 |
| Hsp92II | CATG | 1 cut(s) | 179 |
| LpnPI | CCDG | 1 cut(s) | 204 |
| Lsp1109I | GCAGC | 1 cut(s) | 164 |
| MaeI | CTAG | 1 cut(s) | 162 |
| MaeIII | GTNAC | 3 cut(s) | 22, 37, 269 |
| MboII | GAAGA | 2 cut(s) | 215, 218 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MluCI | AATT | 2 cut(s) | 30, 133 |
| MlyI | GAGTC | 1 cut(s) | 266 |
| MmeI | TCCRAC | 1 cut(s) | 231 |
| MnlI | CCTC | 2 cut(s) | 96, 135 |
| MseI | TTAA | 1 cut(s) | 90 |
| MunI | CAATTG | 1 cut(s) | 30 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 158, 185 |
| NlaIII | CATG | 1 cut(s) | 179 |
| NmuCI | GTSAC | 3 cut(s) | 22, 37, 269 |
| NspI | RCATGY | 1 cut(s) | 179 |
| PkrI | GCNGC | 1 cut(s) | 154 |
| PleI | GAGTC | 1 cut(s) | 266 |
| PpsI | GAGTC | 1 cut(s) | 266 |
| PshAI | GACNNNNGTC | 1 cut(s) | 44 |
| PspPI | GGNCC | 1 cut(s) | 46 |
| RsaI | GTAC | 1 cut(s) | 174 |
| RsaNI | GTAC | 1 cut(s) | 173 |
| SaqAI | TTAA | 1 cut(s) | 90 |
| SatI | GCNGC | 1 cut(s) | 153 |
| Sau96I | GGNCC | 1 cut(s) | 46 |
| SchI | GAGTC | 1 cut(s) | 266 |
| SetI | ASST | 5 cut(s) | 80, 88, 157, 169, 190 |
| SgeI | CNNG | 9 cut(s) | 87, 91, 113, 139, 174, 188, 231, 242, 254 |
| SinI | GGWCC | 1 cut(s) | 46 |
| Sse9I | AATT | 2 cut(s) | 30, 133 |
| SsiI | CCGC | 3 cut(s) | 5, 44, 119 |
| SspMI | CTAG | 1 cut(s) | 162 |
| TasI | AATT | 2 cut(s) | 30, 133 |
| TatI | WGTACW | 1 cut(s) | 172 |
| Tru1I | TTAA | 1 cut(s) | 90 |
| Tru9I | TTAA | 1 cut(s) | 90 |
| TseFI | GTSAC | 3 cut(s) | 22, 37, 269 |
| TseI | GCWGC | 1 cut(s) | 152 |
| Tsp45I | GTSAC | 3 cut(s) | 22, 37, 269 |
| VpaK11BI | GGWCC | 1 cut(s) | 46 |
| XceI | RCATGY | 1 cut(s) | 179 |
| XspI | CTAG | 1 cut(s) | 162 |