Reverse transcriptase-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 99, 150 |
| AccIII | TCCGGA | 1 cut(s) | 279 |
| AciI | CCGC | 2 cut(s) | 85, 266 |
| AcsI | RAATTY | 1 cut(s) | 161 |
| AcuI | CTGAAG | 1 cut(s) | 147 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 99, 150 |
| AgsI | TTSAA | 1 cut(s) | 209 |
| AjnI | CCWGG | 1 cut(s) | 20 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 74, 106 |
| AluBI | AGCT | 4 cut(s) | 173, 238, 243, 298 |
| AluI | AGCT | 4 cut(s) | 173, 238, 243, 298 |
| Alw26I | GTCTC | 1 cut(s) | 231 |
| Aor13HI | TCCGGA | 1 cut(s) | 279 |
| AoxI | GGCC | 1 cut(s) | 69 |
| ApoI | RAATTY | 1 cut(s) | 161 |
| AspS9I | GGNCC | 2 cut(s) | 24, 69 |
| AsuHPI | GGTGA | 1 cut(s) | 272 |
| AvaII | GGWCC | 1 cut(s) | 24 |
| BauI | CACGAG | 1 cut(s) | 33 |
| BccI | CCATC | 1 cut(s) | 207 |
| BciT130I | CCWGG | 1 cut(s) | 22 |
| BciVI | GTATCC | 1 cut(s) | 276 |
| BcoDI | GTCTC | 1 cut(s) | 231 |
| BfaI | CTAG | 1 cut(s) | 287 |
| BfuI | GTATCC | 1 cut(s) | 276 |
| BisI | GCNGC | 1 cut(s) | 267 |
| BlpI | GCTNAGC | 1 cut(s) | 239 |
| BlsI | GCNGC | 1 cut(s) | 268 |
| Bme1390I | CCNGG | 1 cut(s) | 22 |
| Bme18I | GGWCC | 1 cut(s) | 24 |
| BmgT120I | GGNCC | 2 cut(s) | 24, 69 |
| BmiI | GGNNCC | 2 cut(s) | 26, 330 |
| BmrFI | CCNGG | 1 cut(s) | 22 |
| BmsI | GCATC | 1 cut(s) | 253 |
| BpmI | CTGGAG | 1 cut(s) | 4 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 239 |
| BpuEI | CTTGAG | 1 cut(s) | 254 |
| BsaI | GGTCTC | 1 cut(s) | 231 |
| BsaWI | WCCGGW | 1 cut(s) | 279 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 99, 150 |
| BseAI | TCCGGA | 1 cut(s) | 279 |
| BseBI | CCWGG | 1 cut(s) | 22 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 99, 150 |
| BseRI | GAGGAG | 1 cut(s) | 308 |
| BseYI | CCCAGC | 1 cut(s) | 243 |
| BshFI | GGCC | 1 cut(s) | 71 |
| BsiSI | CCGG | 1 cut(s) | 280 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 99, 150 |
| BsmAI | GTCTC | 1 cut(s) | 231 |
| BsnI | GGCC | 1 cut(s) | 71 |
| Bso31I | GGTCTC | 1 cut(s) | 231 |
| Bsp13I | TCCGGA | 1 cut(s) | 279 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 239 |
| BspACI | CCGC | 2 cut(s) | 85, 266 |
| BspANI | GGCC | 1 cut(s) | 71 |
| BspEI | TCCGGA | 1 cut(s) | 279 |
| BspLI | GGNNCC | 2 cut(s) | 26, 330 |
| BspTNI | GGTCTC | 1 cut(s) | 231 |
| BssSI | CACGAG | 1 cut(s) | 33 |
| Bst2BI | CACGAG | 1 cut(s) | 33 |
| Bst2UI | CCWGG | 1 cut(s) | 22 |
| Bst4CI | ACNGT | 1 cut(s) | 260 |
| Bst6I | CTCTTC | 1 cut(s) | 285 |
| BstC8I | GCNNGC | 1 cut(s) | 315 |
| BstDEI | CTNAG | 1 cut(s) | 239 |
| BstMAI | GTCTC | 1 cut(s) | 231 |
| BstNI | CCWGG | 1 cut(s) | 22 |
| BstSCI | CCNGG | 1 cut(s) | 20 |
| BsuI | GTATCC | 1 cut(s) | 276 |
| BsuRI | GGCC | 1 cut(s) | 71 |
| Cac8I | GCNNGC | 1 cut(s) | 315 |
| Cfr13I | GGNCC | 2 cut(s) | 24, 69 |
| CviAII | CATG | 1 cut(s) | 145 |
| CviJI | RGCY | 8 cut(s) | 9, 71, 173, 238, 243, 269, 298, 313 |
| CviKI_1 | RGCY | 8 cut(s) | 9, 71, 173, 238, 243, 269, 298, 313 |
| DdeI | CTNAG | 1 cut(s) | 239 |
| Eam1104I | CTCTTC | 1 cut(s) | 285 |
| EarI | CTCTTC | 1 cut(s) | 285 |
| Eco31I | GGTCTC | 1 cut(s) | 231 |
| Eco47I | GGWCC | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 1 cut(s) | 147 |
| EcoO109I | RGGNCCY | 1 cut(s) | 24 |
| EcoRII | CCWGG | 1 cut(s) | 20 |
| FaeI | CATG | 1 cut(s) | 148 |
| FaiI | YATR | 3 cut(s) | 100, 146, 337 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 282, 314 |
| FatI | CATG | 1 cut(s) | 144 |
| Fnu4HI | GCNGC | 1 cut(s) | 267 |
| Fsp4HI | GCNGC | 1 cut(s) | 267 |
| FspBI | CTAG | 1 cut(s) | 287 |
| GluI | GCNGC | 1 cut(s) | 267 |
| GsaI | CCCAGC | 1 cut(s) | 247 |
| GsuI | CTGGAG | 1 cut(s) | 4 |
| HaeIII | GGCC | 1 cut(s) | 71 |
| HapII | CCGG | 1 cut(s) | 280 |
| Hin1II | CATG | 1 cut(s) | 148 |
| HincII | GTYRAC | 2 cut(s) | 116, 141 |
| HindII | GTYRAC | 2 cut(s) | 116, 141 |
| HinfI | GANTC | 1 cut(s) | 190 |
| HpaI | GTTAAC | 1 cut(s) | 141 |
| HpaII | CCGG | 1 cut(s) | 280 |
| HphI | GGTGA | 1 cut(s) | 272 |
| Hpy166II | GTNNAC | 2 cut(s) | 116, 141 |
| Hpy188I | TCNGA | 2 cut(s) | 127, 220 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 55, 280 |
| Hpy8I | GTNNAC | 2 cut(s) | 116, 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 260 |
| HpyF3I | CTNAG | 1 cut(s) | 239 |
| Hsp92II | CATG | 1 cut(s) | 148 |
| Kpn2I | TCCGGA | 1 cut(s) | 279 |
| KspAI | GTTAAC | 1 cut(s) | 141 |
| LmnI | GCTCC | 1 cut(s) | 295 |
| LpnPI | CCDG | 6 cut(s) | 7, 34, 68, 229, 293, 311 |
| LweI | GCATC | 1 cut(s) | 253 |
| MaeI | CTAG | 1 cut(s) | 287 |
| MboII | GAAGA | 2 cut(s) | 91, 302 |
| MluCI | AATT | 3 cut(s) | 41, 88, 161 |
| MlyI | GAGTC | 1 cut(s) | 184 |
| MnlI | CCTC | 3 cut(s) | 38, 192, 286 |
| MroI | TCCGGA | 1 cut(s) | 279 |
| MseI | TTAA | 3 cut(s) | 140, 156, 249 |
| MspI | CCGG | 1 cut(s) | 280 |
| MspR9I | CCNGG | 1 cut(s) | 22 |
| MvaI | CCWGG | 1 cut(s) | 22 |
| NlaIII | CATG | 1 cut(s) | 148 |
| NlaIV | GGNNCC | 2 cut(s) | 26, 330 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 99, 150 |
| PfoI | TCCNGGA | 1 cut(s) | 20 |
| PkrI | GCNGC | 1 cut(s) | 268 |
| PleI | GAGTC | 1 cut(s) | 184 |
| PpsI | GAGTC | 1 cut(s) | 184 |
| PpuMI | RGGWCCY | 1 cut(s) | 24 |
| Psp5II | RGGWCCY | 1 cut(s) | 24 |
| Psp6I | CCWGG | 1 cut(s) | 20 |
| PspFI | CCCAGC | 1 cut(s) | 243 |
| PspGI | CCWGG | 1 cut(s) | 20 |
| PspN4I | GGNNCC | 2 cut(s) | 26, 330 |
| PspPI | GGNCC | 2 cut(s) | 24, 69 |
| PspPPI | RGGWCCY | 1 cut(s) | 24 |
| SaqAI | TTAA | 3 cut(s) | 140, 156, 249 |
| SatI | GCNGC | 1 cut(s) | 267 |
| Sau96I | GGNCC | 2 cut(s) | 24, 69 |
| SchI | GAGTC | 1 cut(s) | 184 |
| ScrFI | CCNGG | 1 cut(s) | 22 |
| SetI | ASST | 4 cut(s) | 175, 240, 245, 300 |
| SfaNI | GCATC | 1 cut(s) | 253 |
| SinI | GGWCC | 1 cut(s) | 24 |
| SmlI | CTYRAG | 1 cut(s) | 233 |
| SmoI | CTYRAG | 1 cut(s) | 233 |
| Sse9I | AATT | 3 cut(s) | 41, 88, 161 |
| SsiI | CCGC | 2 cut(s) | 85, 266 |
| SspMI | CTAG | 1 cut(s) | 287 |
| StyD4I | CCNGG | 1 cut(s) | 20 |
| TaaI | ACNGT | 1 cut(s) | 260 |
| TasI | AATT | 3 cut(s) | 41, 88, 161 |
| TauI | GCSGC | 1 cut(s) | 269 |
| Tru1I | TTAA | 3 cut(s) | 140, 156, 249 |
| Tru9I | TTAA | 3 cut(s) | 140, 156, 249 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 99, 150 |
| VpaK11BI | GGWCC | 1 cut(s) | 24 |
| XapI | RAATTY | 1 cut(s) | 161 |
| XspI | CTAG | 1 cut(s) | 287 |