Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 444 |
| AccB1I | GGYRCC | 2 cut(s) | 381, 432 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 42 |
| AciI | CCGC | 1 cut(s) | 29 |
| AclWI | GGATC | 2 cut(s) | 236, 277 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 42, 292, 460 |
| AjnI | CCWGG | 2 cut(s) | 286, 458 |
| AluBI | AGCT | 4 cut(s) | 194, 278, 317, 480 |
| AluI | AGCT | 4 cut(s) | 194, 278, 317, 480 |
| Alw26I | GTCTC | 1 cut(s) | 301 |
| AlwI | GGATC | 2 cut(s) | 236, 277 |
| Ama87I | CYCGRG | 1 cut(s) | 195 |
| ApeKI | GCWGC | 1 cut(s) | 477 |
| AspLEI | GCGC | 1 cut(s) | 445 |
| AsuHPI | GGTGA | 4 cut(s) | 217, 251, 383, 389 |
| AvaI | CYCGRG | 1 cut(s) | 195 |
| BaeGI | GKGCMC | 1 cut(s) | 437 |
| BanI | GGYRCC | 2 cut(s) | 381, 432 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 154, 186 |
| BbvI | GCAGC | 1 cut(s) | 489 |
| BccI | CCATC | 1 cut(s) | 202 |
| BciT130I | CCWGG | 2 cut(s) | 288, 460 |
| BcoDI | GTCTC | 1 cut(s) | 301 |
| BfaI | CTAG | 1 cut(s) | 339 |
| BisI | GCNGC | 1 cut(s) | 478 |
| BlsI | GCNGC | 1 cut(s) | 479 |
| Bme1390I | CCNGG | 2 cut(s) | 288, 460 |
| BmeT110I | CYCGRG | 1 cut(s) | 195 |
| BmiI | GGNNCC | 2 cut(s) | 383, 434 |
| BmrFI | CCNGG | 2 cut(s) | 288, 460 |
| BmsI | GCATC | 2 cut(s) | 16, 79 |
| BpuEI | CTTGAG | 1 cut(s) | 60 |
| BsaI | GGTCTC | 1 cut(s) | 301 |
| BsaJI | CCNNGG | 3 cut(s) | 286, 287, 459 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 42, 292, 460 |
| Bse1I | ACTGG | 2 cut(s) | 373, 400 |
| BseBI | CCWGG | 2 cut(s) | 288, 460 |
| BseDI | CCNNGG | 3 cut(s) | 286, 287, 459 |
| BseGI | GGATG | 1 cut(s) | 220 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 42, 292, 460 |
| BseMII | CTCAG | 1 cut(s) | 124 |
| BseNI | ACTGG | 2 cut(s) | 373, 400 |
| BseSI | GKGCMC | 1 cut(s) | 437 |
| BseXI | GCAGC | 1 cut(s) | 489 |
| BshNI | GGYRCC | 2 cut(s) | 381, 432 |
| BsiHKCI | CYCGRG | 1 cut(s) | 195 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 42, 292, 460 |
| BsmAI | GTCTC | 1 cut(s) | 301 |
| Bso31I | GGTCTC | 1 cut(s) | 301 |
| BsoBI | CYCGRG | 1 cut(s) | 195 |
| Bsp1286I | GDGCHC | 1 cut(s) | 437 |
| Bsp143I | GATC | 3 cut(s) | 130, 241, 282 |
| BspACI | CCGC | 1 cut(s) | 29 |
| BspCNI | CTCAG | 1 cut(s) | 123 |
| BspLI | GGNNCC | 2 cut(s) | 383, 434 |
| BspPI | GGATC | 2 cut(s) | 236, 277 |
| BspT107I | GGYRCC | 2 cut(s) | 381, 432 |
| BspTNI | GGTCTC | 1 cut(s) | 301 |
| BsrI | ACTGG | 2 cut(s) | 373, 400 |
| BssECI | CCNNGG | 3 cut(s) | 286, 287, 459 |
| BssMI | GATC | 3 cut(s) | 130, 241, 282 |
| Bst2UI | CCWGG | 2 cut(s) | 288, 460 |
| BstC8I | GCNNGC | 3 cut(s) | 8, 315, 386 |
| BstDEI | CTNAG | 2 cut(s) | 110, 279 |
| BstF5I | GGATG | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 445 |
| BstKTI | GATC | 3 cut(s) | 133, 244, 285 |
| BstMAI | GTCTC | 1 cut(s) | 301 |
| BstMBI | GATC | 3 cut(s) | 130, 241, 282 |
| BstNI | CCWGG | 2 cut(s) | 288, 460 |
| BstSCI | CCNGG | 2 cut(s) | 286, 458 |
| BstSLI | GKGCMC | 1 cut(s) | 437 |
| BstV1I | GCAGC | 1 cut(s) | 489 |
| BstX2I | RGATCY | 1 cut(s) | 282 |
| BstYI | RGATCY | 1 cut(s) | 282 |
| BtsCI | GGATG | 1 cut(s) | 220 |
| Cac8I | GCNNGC | 3 cut(s) | 8, 315, 386 |
| CfoI | GCGC | 1 cut(s) | 445 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 217, 252 |
| CviJI | RGCY | 5 cut(s) | 194, 278, 317, 464, 480 |
| CviKI_1 | RGCY | 5 cut(s) | 194, 278, 317, 464, 480 |
| DdeI | CTNAG | 2 cut(s) | 110, 279 |
| DpnI | GATC | 3 cut(s) | 132, 243, 284 |
| DpnII | GATC | 3 cut(s) | 130, 241, 282 |
| Eco31I | GGTCTC | 1 cut(s) | 301 |
| Eco88I | CYCGRG | 1 cut(s) | 195 |
| EcoRII | CCWGG | 2 cut(s) | 286, 458 |
| FaiI | YATR | 8 cut(s) | 117, 189, 302, 304, 324, 366, 377, 427 |
| Fnu4HI | GCNGC | 1 cut(s) | 478 |
| FokI | GGATG | 1 cut(s) | 227 |
| Fsp4HI | GCNGC | 1 cut(s) | 478 |
| FspBI | CTAG | 1 cut(s) | 339 |
| FspI | TGCGCA | 1 cut(s) | 444 |
| GlaI | GCGC | 1 cut(s) | 444 |
| GluI | GCNGC | 1 cut(s) | 478 |
| HhaI | GCGC | 1 cut(s) | 445 |
| Hin6I | GCGC | 1 cut(s) | 443 |
| HinP1I | GCGC | 1 cut(s) | 443 |
| HphI | GGTGA | 4 cut(s) | 217, 251, 383, 389 |
| Hpy188III | TCNNGA | 3 cut(s) | 77, 197, 259 |
| HpyAV | CCTTC | 1 cut(s) | 286 |
| HpyCH4V | TGCA | 1 cut(s) | 61 |
| HpyF3I | CTNAG | 2 cut(s) | 110, 279 |
| HspAI | GCGC | 1 cut(s) | 443 |
| Kzo9I | GATC | 3 cut(s) | 130, 241, 282 |
| Lsp1109I | GCAGC | 1 cut(s) | 489 |
| LweI | GCATC | 2 cut(s) | 16, 79 |
| MaeI | CTAG | 1 cut(s) | 339 |
| MaeIII | GTNAC | 3 cut(s) | 264, 330, 395 |
| MalI | GATC | 3 cut(s) | 132, 243, 284 |
| MboI | GATC | 3 cut(s) | 130, 241, 282 |
| MboII | GAAGA | 1 cut(s) | 162 |
| MflI | RGATCY | 1 cut(s) | 282 |
| MhlI | GDGCHC | 1 cut(s) | 437 |
| MmeI | TCCRAC | 3 cut(s) | 23, 122, 394 |
| MnlI | CCTC | 4 cut(s) | 39, 117, 193, 241 |
| MspR9I | CCNGG | 2 cut(s) | 288, 460 |
| MvaI | CCWGG | 2 cut(s) | 288, 460 |
| NdeII | GATC | 3 cut(s) | 130, 241, 282 |
| NlaIV | GGNNCC | 2 cut(s) | 383, 434 |
| NmuCI | GTSAC | 2 cut(s) | 264, 395 |
| NsbI | TGCGCA | 1 cut(s) | 444 |
| PasI | CCCWGGG | 1 cut(s) | 287 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 130 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 42 |
| PkrI | GCNGC | 1 cut(s) | 479 |
| Psp6I | CCWGG | 2 cut(s) | 286, 458 |
| PspGI | CCWGG | 2 cut(s) | 286, 458 |
| PspN4I | GGNNCC | 2 cut(s) | 383, 434 |
| PsuI | RGATCY | 1 cut(s) | 282 |
| SatI | GCNGC | 1 cut(s) | 478 |
| Sau3AI | GATC | 3 cut(s) | 130, 241, 282 |
| ScrFI | CCNGG | 2 cut(s) | 288, 460 |
| SduI | GDGCHC | 1 cut(s) | 437 |
| SetI | ASST | 7 cut(s) | 196, 204, 233, 280, 297, 319, 482 |
| SfaNI | GCATC | 2 cut(s) | 16, 79 |
| SmlI | CTYRAG | 1 cut(s) | 75 |
| SmoI | CTYRAG | 1 cut(s) | 75 |
| SsiI | CCGC | 1 cut(s) | 29 |
| SspMI | CTAG | 1 cut(s) | 339 |
| StyD4I | CCNGG | 2 cut(s) | 286, 458 |
| TaqI | TCGA | 1 cut(s) | 124 |
| TseFI | GTSAC | 2 cut(s) | 264, 395 |
| TseI | GCWGC | 1 cut(s) | 477 |
| Tsp45I | GTSAC | 2 cut(s) | 264, 395 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 339 |