Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 62 - 184 | 8e-26 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 87 |
| AccI | GTMKAC | 1 cut(s) | 358 |
| AciI | CCGC | 1 cut(s) | 167 |
| AclWI | GGATC | 1 cut(s) | 235 |
| AcsI | RAATTY | 2 cut(s) | 25, 599 |
| AcuI | CTGAAG | 1 cut(s) | 197 |
| AdeI | CACNNNGTG | 1 cut(s) | 164 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 64, 87, 167 |
| AflIII | ACRYGT | 1 cut(s) | 484 |
| AgsI | TTSAA | 5 cut(s) | 265, 383, 415, 438, 458 |
| AluBI | AGCT | 3 cut(s) | 34, 326, 545 |
| AluI | AGCT | 3 cut(s) | 34, 326, 545 |
| Alw26I | GTCTC | 1 cut(s) | 274 |
| AlwI | GGATC | 1 cut(s) | 235 |
| ApeKI | GCWGC | 1 cut(s) | 269 |
| ApoI | RAATTY | 2 cut(s) | 25, 599 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 126 |
| AspLEI | GCGC | 1 cut(s) | 535 |
| AsuHPI | GGTGA | 1 cut(s) | 294 |
| BaeGI | GKGCMC | 1 cut(s) | 47 |
| BbsI | GAAGAC | 1 cut(s) | 487 |
| BbvI | GCAGC | 1 cut(s) | 281 |
| BccI | CCATC | 1 cut(s) | 185 |
| BcoDI | GTCTC | 1 cut(s) | 274 |
| BfaI | CTAG | 4 cut(s) | 132, 443, 513, 546 |
| BisI | GCNGC | 1 cut(s) | 270 |
| BlsI | GCNGC | 1 cut(s) | 271 |
| BmsI | GCATC | 2 cut(s) | 508, 601 |
| BpiI | GAAGAC | 1 cut(s) | 487 |
| BsaJI | CCNNGG | 1 cut(s) | 105 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 64, 87, 167 |
| BseDI | CCNNGG | 1 cut(s) | 105 |
| BseGI | GGATG | 1 cut(s) | 616 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 64, 87, 167 |
| BseMII | CTCAG | 3 cut(s) | 365, 490, 596 |
| BseRI | GAGGAG | 1 cut(s) | 437 |
| BseSI | GKGCMC | 1 cut(s) | 47 |
| BseXI | GCAGC | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 64, 87, 167 |
| BsmAI | GTCTC | 1 cut(s) | 274 |
| Bsp1286I | GDGCHC | 1 cut(s) | 47 |
| Bsp143I | GATC | 3 cut(s) | 218, 240, 247 |
| BspACI | CCGC | 1 cut(s) | 167 |
| BspCNI | CTCAG | 3 cut(s) | 364, 489, 597 |
| BspPI | GGATC | 1 cut(s) | 235 |
| BssECI | CCNNGG | 1 cut(s) | 105 |
| BssMI | GATC | 3 cut(s) | 218, 240, 247 |
| BssT1I | CCWWGG | 1 cut(s) | 105 |
| Bst4CI | ACNGT | 2 cut(s) | 10, 321 |
| Bst6I | CTCTTC | 3 cut(s) | 139, 211, 453 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 164 |
| BstC8I | GCNNGC | 3 cut(s) | 169, 173, 256 |
| BstDEI | CTNAG | 4 cut(s) | 48, 351, 476, 605 |
| BstF5I | GGATG | 1 cut(s) | 616 |
| BstHHI | GCGC | 1 cut(s) | 535 |
| BstKTI | GATC | 3 cut(s) | 221, 243, 250 |
| BstMAI | GTCTC | 1 cut(s) | 274 |
| BstMBI | GATC | 3 cut(s) | 218, 240, 247 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 164 |
| BstNSI | RCATGY | 1 cut(s) | 488 |
| BstSLI | GKGCMC | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 281 |
| BstV2I | GAAGAC | 1 cut(s) | 487 |
| BtsCI | GGATG | 1 cut(s) | 616 |
| Cac8I | GCNNGC | 3 cut(s) | 169, 173, 256 |
| CfoI | GCGC | 1 cut(s) | 535 |
| CviAII | CATG | 7 cut(s) | 82, 229, 251, 311, 340, 407, 485 |
| CviJI | RGCY | 9 cut(s) | 34, 68, 80, 91, 171, 175, 326, 350, 545 |
| CviKI_1 | RGCY | 9 cut(s) | 34, 68, 80, 91, 171, 175, 326, 350, 545 |
| DdeI | CTNAG | 4 cut(s) | 48, 351, 476, 605 |
| DpnI | GATC | 3 cut(s) | 220, 242, 249 |
| DpnII | GATC | 3 cut(s) | 218, 240, 247 |
| DraIII | CACNNNGTG | 1 cut(s) | 164 |
| Eam1104I | CTCTTC | 3 cut(s) | 139, 211, 453 |
| EarI | CTCTTC | 3 cut(s) | 139, 211, 453 |
| Eco130I | CCWWGG | 1 cut(s) | 105 |
| Eco57I | CTGAAG | 1 cut(s) | 197 |
| EcoT14I | CCWWGG | 1 cut(s) | 105 |
| ErhI | CCWWGG | 1 cut(s) | 105 |
| FaeI | CATG | 7 cut(s) | 85, 232, 254, 314, 343, 410, 488 |
| FatI | CATG | 7 cut(s) | 81, 228, 250, 310, 339, 406, 484 |
| FauI | CCCGC | 1 cut(s) | 160 |
| FblI | GTMKAC | 1 cut(s) | 358 |
| Fnu4HI | GCNGC | 1 cut(s) | 270 |
| FokI | GGATG | 1 cut(s) | 623 |
| Fsp4HI | GCNGC | 1 cut(s) | 270 |
| FspBI | CTAG | 4 cut(s) | 132, 443, 513, 546 |
| GlaI | GCGC | 1 cut(s) | 534 |
| GluI | GCNGC | 1 cut(s) | 270 |
| HhaI | GCGC | 1 cut(s) | 535 |
| Hin1II | CATG | 7 cut(s) | 85, 232, 254, 314, 343, 410, 488 |
| Hin6I | GCGC | 1 cut(s) | 533 |
| HinP1I | GCGC | 1 cut(s) | 533 |
| HinfI | GANTC | 1 cut(s) | 355 |
| HphI | GGTGA | 1 cut(s) | 294 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 359 |
| Hpy188I | TCNGA | 5 cut(s) | 245, 354, 479, 576, 606 |
| Hpy188III | TCNNGA | 3 cut(s) | 222, 455, 596 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 359 |
| HpyAV | CCTTC | 1 cut(s) | 329 |
| HpyCH4III | ACNGT | 2 cut(s) | 10, 321 |
| HpyCH4V | TGCA | 3 cut(s) | 139, 158, 490 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 164 |
| HpyF3I | CTNAG | 4 cut(s) | 48, 351, 476, 605 |
| Hsp92II | CATG | 7 cut(s) | 85, 232, 254, 314, 343, 410, 488 |
| HspAI | GCGC | 1 cut(s) | 533 |
| Kzo9I | GATC | 3 cut(s) | 218, 240, 247 |
| LmnI | GCTCC | 2 cut(s) | 514, 598 |
| LpnPI | CCDG | 3 cut(s) | 157, 207, 240 |
| Lsp1109I | GCAGC | 1 cut(s) | 281 |
| LweI | GCATC | 2 cut(s) | 508, 601 |
| MaeI | CTAG | 4 cut(s) | 132, 443, 513, 546 |
| MaeIII | GTNAC | 3 cut(s) | 396, 548, 586 |
| MalI | GATC | 3 cut(s) | 220, 242, 249 |
| MboI | GATC | 3 cut(s) | 218, 240, 247 |
| MboII | GAAGA | 5 cut(s) | 28, 156, 198, 470, 492 |
| MfeI | CAATTG | 1 cut(s) | 60 |
| MhlI | GDGCHC | 1 cut(s) | 47 |
| MluCI | AATT | 4 cut(s) | 25, 60, 234, 599 |
| MlyI | GAGTC | 1 cut(s) | 364 |
| MmeI | TCCRAC | 1 cut(s) | 408 |
| MnlI | CCTC | 6 cut(s) | 34, 58, 218, 415, 454, 600 |
| MroXI | GAANNNNTTC | 1 cut(s) | 126 |
| MseI | TTAA | 2 cut(s) | 117, 637 |
| MslI | CAYNNNNRTG | 2 cut(s) | 34, 344 |
| MunI | CAATTG | 1 cut(s) | 60 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 164 |
| NdeII | GATC | 3 cut(s) | 218, 240, 247 |
| NlaIII | CATG | 7 cut(s) | 85, 232, 254, 314, 343, 410, 488 |
| NmuCI | GTSAC | 1 cut(s) | 548 |
| NspI | RCATGY | 1 cut(s) | 488 |
| PciI | ACATGT | 1 cut(s) | 484 |
| PdmI | GAANNNNTTC | 1 cut(s) | 126 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 87 |
| PkrI | GCNGC | 1 cut(s) | 271 |
| PleI | GAGTC | 1 cut(s) | 363 |
| PpsI | GAGTC | 1 cut(s) | 363 |
| PscI | ACATGT | 1 cut(s) | 484 |
| RseI | CAYNNNNRTG | 2 cut(s) | 34, 344 |
| SaqAI | TTAA | 2 cut(s) | 117, 637 |
| SatI | GCNGC | 1 cut(s) | 270 |
| Sau3AI | GATC | 3 cut(s) | 218, 240, 247 |
| SchI | GAGTC | 1 cut(s) | 364 |
| SduI | GDGCHC | 1 cut(s) | 47 |
| SetI | ASST | 6 cut(s) | 36, 307, 328, 448, 465, 547 |
| SfaNI | GCATC | 2 cut(s) | 508, 601 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 34, 344 |
| Sse9I | AATT | 4 cut(s) | 25, 60, 234, 599 |
| SsiI | CCGC | 1 cut(s) | 167 |
| SspMI | CTAG | 4 cut(s) | 132, 443, 513, 546 |
| StyI | CCWWGG | 1 cut(s) | 105 |
| TaaI | ACNGT | 2 cut(s) | 10, 321 |
| TasI | AATT | 4 cut(s) | 25, 60, 234, 599 |
| Tru1I | TTAA | 2 cut(s) | 117, 637 |
| Tru9I | TTAA | 2 cut(s) | 117, 637 |
| TseFI | GTSAC | 1 cut(s) | 548 |
| TseI | GCWGC | 1 cut(s) | 269 |
| Tsp45I | GTSAC | 1 cut(s) | 548 |
| TspDTI | ATGAA | 6 cut(s) | 135, 348, 356, 395, 439, 491 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 87 |
| XapI | RAATTY | 2 cut(s) | 25, 599 |
| XceI | RCATGY | 1 cut(s) | 488 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 168 |
| XmiI | GTMKAC | 1 cut(s) | 358 |
| XmnI | GAANNNNTTC | 1 cut(s) | 126 |
| XspI | CTAG | 4 cut(s) | 132, 443, 513, 546 |