Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 147, 489 |
| AarI | CACCTGC | 1 cut(s) | 628 |
| Acc36I | ACCTGC | 2 cut(s) | 317, 628 |
| AgsI | TTSAA | 3 cut(s) | 11, 341, 353 |
| AhlI | ACTAGT | 2 cut(s) | 98, 440 |
| AluBI | AGCT | 5 cut(s) | 14, 38, 302, 356, 380 |
| AluI | AGCT | 5 cut(s) | 14, 38, 302, 356, 380 |
| Alw26I | GTCTC | 2 cut(s) | 270, 608 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 332 |
| AoxI | GGCC | 1 cut(s) | 311 |
| ApeKI | GCWGC | 1 cut(s) | 299 |
| AsuHPI | GGTGA | 1 cut(s) | 277 |
| BbvI | GCAGC | 1 cut(s) | 311 |
| BccI | CCATC | 2 cut(s) | 51, 393 |
| BcoDI | GTCTC | 2 cut(s) | 270, 608 |
| BcuI | ACTAGT | 2 cut(s) | 98, 440 |
| BfaI | CTAG | 4 cut(s) | 99, 237, 441, 579 |
| BfuAI | ACCTGC | 2 cut(s) | 317, 628 |
| BglII | AGATCT | 2 cut(s) | 170, 512 |
| BisI | GCNGC | 1 cut(s) | 300 |
| BlsI | GCNGC | 1 cut(s) | 301 |
| BmsI | GCATC | 1 cut(s) | 640 |
| Bsa29I | ATCGAT | 2 cut(s) | 220, 562 |
| BseCI | ATCGAT | 2 cut(s) | 220, 562 |
| BseGI | GGATG | 2 cut(s) | 640, 655 |
| BseMII | CTCAG | 2 cut(s) | 48, 390 |
| BseXI | GCAGC | 1 cut(s) | 311 |
| BshFI | GGCC | 1 cut(s) | 313 |
| BshVI | ATCGAT | 2 cut(s) | 220, 562 |
| BsmAI | GTCTC | 2 cut(s) | 270, 608 |
| BsmBI | CGTCTC | 1 cut(s) | 270 |
| BsnI | GGCC | 1 cut(s) | 313 |
| Bsp143I | GATC | 3 cut(s) | 170, 267, 512 |
| BspANI | GGCC | 1 cut(s) | 313 |
| BspCNI | CTCAG | 2 cut(s) | 49, 391 |
| BspDI | ATCGAT | 2 cut(s) | 220, 562 |
| BspMI | ACCTGC | 2 cut(s) | 317, 628 |
| BssMI | GATC | 3 cut(s) | 170, 267, 512 |
| Bst4CI | ACNGT | 6 cut(s) | 20, 180, 197, 362, 522, 539 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 157, 233, 332, 499, 575 |
| BstDEI | CTNAG | 2 cut(s) | 57, 399 |
| BstF5I | GGATG | 2 cut(s) | 640, 655 |
| BstKTI | GATC | 3 cut(s) | 173, 270, 515 |
| BstMAI | GTCTC | 2 cut(s) | 270, 608 |
| BstMBI | GATC | 3 cut(s) | 170, 267, 512 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 157, 233, 305, 332, 499, 575 |
| BstNSI | RCATGY | 2 cut(s) | 191, 533 |
| BstV1I | GCAGC | 1 cut(s) | 311 |
| BstX2I | RGATCY | 2 cut(s) | 170, 512 |
| BstYI | RGATCY | 2 cut(s) | 170, 512 |
| Bsu15I | ATCGAT | 2 cut(s) | 220, 562 |
| BsuRI | GGCC | 1 cut(s) | 313 |
| BsuTUI | ATCGAT | 2 cut(s) | 220, 562 |
| BtsCI | GGATG | 2 cut(s) | 640, 655 |
| BtsIMutI | CAGTG | 2 cut(s) | 185, 527 |
| BveI | ACCTGC | 2 cut(s) | 317, 628 |
| CaiI | CAGNNNCTG | 1 cut(s) | 332 |
| ClaI | ATCGAT | 2 cut(s) | 220, 562 |
| CviAII | CATG | 4 cut(s) | 161, 188, 503, 530 |
| CviJI | RGCY | 6 cut(s) | 14, 38, 302, 313, 356, 380 |
| CviKI_1 | RGCY | 6 cut(s) | 14, 38, 302, 313, 356, 380 |
| DdeI | CTNAG | 2 cut(s) | 57, 399 |
| DpnI | GATC | 3 cut(s) | 172, 269, 514 |
| DpnII | GATC | 3 cut(s) | 170, 267, 512 |
| Eco147I | AGGCCT | 1 cut(s) | 313 |
| EcoT22I | ATGCAT | 2 cut(s) | 162, 504 |
| Esp3I | CGTCTC | 1 cut(s) | 270 |
| FaeI | CATG | 4 cut(s) | 164, 191, 506, 533 |
| FatI | CATG | 4 cut(s) | 160, 187, 502, 529 |
| Fnu4HI | GCNGC | 1 cut(s) | 300 |
| FokI | GGATG | 2 cut(s) | 647, 662 |
| Fsp4HI | GCNGC | 1 cut(s) | 300 |
| FspBI | CTAG | 4 cut(s) | 99, 237, 441, 579 |
| GluI | GCNGC | 1 cut(s) | 300 |
| HaeIII | GGCC | 1 cut(s) | 313 |
| Hin1II | CATG | 4 cut(s) | 164, 191, 506, 533 |
| HindIII | AAGCTT | 2 cut(s) | 12, 354 |
| HinfI | GANTC | 3 cut(s) | 65, 407, 662 |
| HphI | GGTGA | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 2 cut(s) | 193, 535 |
| Hpy188I | TCNGA | 5 cut(s) | 70, 96, 412, 438, 667 |
| Hpy188III | TCNNGA | 1 cut(s) | 632 |
| Hpy8I | GTNNAC | 2 cut(s) | 193, 535 |
| HpyCH4III | ACNGT | 6 cut(s) | 20, 180, 197, 362, 522, 539 |
| HpyCH4V | TGCA | 5 cut(s) | 160, 215, 335, 502, 557 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 157, 233, 305, 332, 499, 575 |
| HpyF3I | CTNAG | 2 cut(s) | 57, 399 |
| Hsp92II | CATG | 4 cut(s) | 164, 191, 506, 533 |
| Kzo9I | GATC | 3 cut(s) | 170, 267, 512 |
| LpnPI | CCDG | 3 cut(s) | 312, 617, 633 |
| Lsp1109I | GCAGC | 1 cut(s) | 311 |
| LweI | GCATC | 1 cut(s) | 640 |
| MaeI | CTAG | 4 cut(s) | 99, 237, 441, 579 |
| MaeIII | GTNAC | 2 cut(s) | 106, 448 |
| MalI | GATC | 3 cut(s) | 172, 269, 514 |
| MboI | GATC | 3 cut(s) | 170, 267, 512 |
| MflI | RGATCY | 2 cut(s) | 170, 512 |
| MlyI | GAGTC | 2 cut(s) | 74, 416 |
| MmeI | TCCRAC | 3 cut(s) | 32, 48, 374 |
| MnlI | CCTC | 6 cut(s) | 52, 123, 340, 394, 465, 640 |
| Mph1103I | ATGCAT | 2 cut(s) | 162, 504 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 157, 233, 305, 332, 499, 575 |
| NdeII | GATC | 3 cut(s) | 170, 267, 512 |
| NlaIII | CATG | 4 cut(s) | 164, 191, 506, 533 |
| NsiI | ATGCAT | 2 cut(s) | 162, 504 |
| NspI | RCATGY | 2 cut(s) | 191, 533 |
| PaqCI | CACCTGC | 1 cut(s) | 628 |
| PceI | AGGCCT | 1 cut(s) | 313 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 276 |
| PfeI | GAWTC | 1 cut(s) | 662 |
| PkrI | GCNGC | 1 cut(s) | 301 |
| PleI | GAGTC | 2 cut(s) | 73, 415 |
| PpsI | GAGTC | 2 cut(s) | 73, 415 |
| PsiI | TTATAA | 2 cut(s) | 147, 489 |
| PstNI | CAGNNNCTG | 1 cut(s) | 332 |
| PsuI | RGATCY | 2 cut(s) | 170, 512 |
| SatI | GCNGC | 1 cut(s) | 300 |
| Sau3AI | GATC | 3 cut(s) | 170, 267, 512 |
| SchI | GAGTC | 2 cut(s) | 74, 416 |
| SfaNI | GCATC | 1 cut(s) | 640 |
| SpeI | ACTAGT | 2 cut(s) | 98, 440 |
| SseBI | AGGCCT | 1 cut(s) | 313 |
| SspMI | CTAG | 4 cut(s) | 99, 237, 441, 579 |
| StuI | AGGCCT | 1 cut(s) | 313 |
| TaaI | ACNGT | 6 cut(s) | 20, 180, 197, 362, 522, 539 |
| TaqI | TCGA | 2 cut(s) | 220, 562 |
| TfiI | GAWTC | 1 cut(s) | 662 |
| TscAI | CASTG | 2 cut(s) | 185, 527 |
| TseI | GCWGC | 1 cut(s) | 299 |
| TspRI | CASTG | 2 cut(s) | 185, 527 |
| XceI | RCATGY | 2 cut(s) | 191, 533 |
| XspI | CTAG | 4 cut(s) | 99, 237, 441, 579 |
| Zsp2I | ATGCAT | 2 cut(s) | 162, 504 |