Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 266 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 18 |
| AciI | CCGC | 2 cut(s) | 91, 209 |
| AcsI | RAATTY | 1 cut(s) | 224 |
| AcuI | CTGAAG | 1 cut(s) | 302 |
| AfaI | GTAC | 1 cut(s) | 46 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 18, 301 |
| AgsI | TTSAA | 1 cut(s) | 120 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 394, 426 |
| AluBI | AGCT | 1 cut(s) | 192 |
| AluI | AGCT | 1 cut(s) | 192 |
| Alw26I | GTCTC | 1 cut(s) | 2 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 280 |
| ApeKI | GCWGC | 2 cut(s) | 173, 251 |
| ApoI | RAATTY | 1 cut(s) | 224 |
| AspS9I | GGNCC | 1 cut(s) | 201 |
| AsuHPI | GGTGA | 1 cut(s) | 141 |
| AvaII | GGWCC | 1 cut(s) | 201 |
| BaeGI | GKGCMC | 1 cut(s) | 271 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 269, 302 |
| BanI | GGYRCC | 1 cut(s) | 266 |
| BbvI | GCAGC | 2 cut(s) | 160, 263 |
| BccI | CCATC | 1 cut(s) | 35 |
| BcoDI | GTCTC | 1 cut(s) | 2 |
| BfaI | CTAG | 1 cut(s) | 177 |
| BisI | GCNGC | 2 cut(s) | 174, 252 |
| BlsI | GCNGC | 2 cut(s) | 175, 253 |
| Bme18I | GGWCC | 1 cut(s) | 201 |
| BmgT120I | GGNCC | 1 cut(s) | 201 |
| BmiI | GGNNCC | 2 cut(s) | 268, 396 |
| BmsI | GCATC | 2 cut(s) | 84, 226 |
| Bsa29I | ATCGAT | 1 cut(s) | 343 |
| BsaI | GGTCTC | 1 cut(s) | 2 |
| BsaJI | CCNNGG | 1 cut(s) | 204 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 18, 301 |
| BseCI | ATCGAT | 1 cut(s) | 343 |
| BseDI | CCNNGG | 1 cut(s) | 204 |
| BseGI | GGATG | 2 cut(s) | 58, 241 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 18, 301 |
| BseSI | GKGCMC | 1 cut(s) | 271 |
| BseXI | GCAGC | 2 cut(s) | 160, 263 |
| BshNI | GGYRCC | 1 cut(s) | 266 |
| BshVI | ATCGAT | 1 cut(s) | 343 |
| BslFI | GGGAC | 1 cut(s) | 337 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 18, 301 |
| BsmAI | GTCTC | 1 cut(s) | 2 |
| BsmFI | GGGAC | 1 cut(s) | 337 |
| Bso31I | GGTCTC | 1 cut(s) | 2 |
| Bsp1286I | GDGCHC | 1 cut(s) | 271 |
| BspACI | CCGC | 2 cut(s) | 91, 209 |
| BspDI | ATCGAT | 1 cut(s) | 343 |
| BspLI | GGNNCC | 2 cut(s) | 268, 396 |
| BspT107I | GGYRCC | 1 cut(s) | 266 |
| BspTNI | GGTCTC | 1 cut(s) | 2 |
| BssECI | CCNNGG | 1 cut(s) | 204 |
| BssT1I | CCWWGG | 1 cut(s) | 204 |
| Bst4CI | ACNGT | 2 cut(s) | 124, 156 |
| Bst6I | CTCTTC | 1 cut(s) | 313 |
| BstF5I | GGATG | 2 cut(s) | 58, 241 |
| BstMAI | GTCTC | 1 cut(s) | 2 |
| BstSLI | GKGCMC | 1 cut(s) | 271 |
| BstV1I | GCAGC | 2 cut(s) | 160, 263 |
| Bsu15I | ATCGAT | 1 cut(s) | 343 |
| BsuTUI | ATCGAT | 1 cut(s) | 343 |
| BtsCI | GGATG | 2 cut(s) | 58, 241 |
| BtsI | GCAGTG | 2 cut(s) | 72, 239 |
| BtsIMutI | CAGTG | 4 cut(s) | 72, 129, 152, 239 |
| CaiI | CAGNNNCTG | 1 cut(s) | 280 |
| Cfr13I | GGNCC | 1 cut(s) | 201 |
| ClaI | ATCGAT | 1 cut(s) | 343 |
| Csp6I | GTAC | 1 cut(s) | 45 |
| CviJI | RGCY | 3 cut(s) | 116, 147, 192 |
| CviKI_1 | RGCY | 3 cut(s) | 116, 147, 192 |
| CviQI | GTAC | 1 cut(s) | 45 |
| Eam1104I | CTCTTC | 1 cut(s) | 313 |
| EarI | CTCTTC | 1 cut(s) | 313 |
| Eco130I | CCWWGG | 1 cut(s) | 204 |
| Eco31I | GGTCTC | 1 cut(s) | 2 |
| Eco47I | GGWCC | 1 cut(s) | 201 |
| Eco57I | CTGAAG | 1 cut(s) | 302 |
| EcoO109I | RGGNCCY | 1 cut(s) | 201 |
| EcoT14I | CCWWGG | 1 cut(s) | 204 |
| ErhI | CCWWGG | 1 cut(s) | 204 |
| FaiI | YATR | 1 cut(s) | 370 |
| FaqI | GGGAC | 1 cut(s) | 337 |
| FauI | CCCGC | 1 cut(s) | 202 |
| Fnu4HI | GCNGC | 2 cut(s) | 174, 252 |
| FokI | GGATG | 2 cut(s) | 65, 248 |
| Fsp4HI | GCNGC | 2 cut(s) | 174, 252 |
| FspBI | CTAG | 1 cut(s) | 177 |
| GluI | GCNGC | 2 cut(s) | 174, 252 |
| HphI | GGTGA | 1 cut(s) | 141 |
| Hpy188I | TCNGA | 2 cut(s) | 276, 415 |
| HpyAV | CCTTC | 1 cut(s) | 295 |
| HpyCH4III | ACNGT | 2 cut(s) | 124, 156 |
| HpyCH4IV | ACGT | 1 cut(s) | 308 |
| HpyCH4V | TGCA | 3 cut(s) | 33, 239, 251 |
| HpySE526I | ACGT | 1 cut(s) | 308 |
| LmnI | GCTCC | 1 cut(s) | 62 |
| LpnPI | CCDG | 1 cut(s) | 25 |
| Lsp1109I | GCAGC | 2 cut(s) | 160, 263 |
| LweI | GCATC | 2 cut(s) | 84, 226 |
| MaeI | CTAG | 1 cut(s) | 177 |
| MaeII | ACGT | 1 cut(s) | 308 |
| MaeIII | GTNAC | 1 cut(s) | 304 |
| MboII | GAAGA | 2 cut(s) | 139, 330 |
| MhlI | GDGCHC | 1 cut(s) | 271 |
| MluCI | AATT | 5 cut(s) | 34, 132, 224, 382, 408 |
| MnlI | CCTC | 4 cut(s) | 223, 314, 385, 408 |
| MseI | TTAA | 1 cut(s) | 27 |
| MslI | CAYNNNNRTG | 1 cut(s) | 80 |
| NlaIV | GGNNCC | 2 cut(s) | 268, 396 |
| NmuCI | GTSAC | 1 cut(s) | 304 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 18 |
| PkrI | GCNGC | 2 cut(s) | 175, 253 |
| PpuMI | RGGWCCY | 1 cut(s) | 201 |
| Psp5II | RGGWCCY | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 2 cut(s) | 268, 396 |
| PspPI | GGNCC | 1 cut(s) | 201 |
| PspPPI | RGGWCCY | 1 cut(s) | 201 |
| PstNI | CAGNNNCTG | 1 cut(s) | 280 |
| RsaI | GTAC | 1 cut(s) | 46 |
| RsaNI | GTAC | 1 cut(s) | 45 |
| RseI | CAYNNNNRTG | 1 cut(s) | 80 |
| SaqAI | TTAA | 1 cut(s) | 27 |
| SatI | GCNGC | 2 cut(s) | 174, 252 |
| Sau96I | GGNCC | 1 cut(s) | 201 |
| SduI | GDGCHC | 1 cut(s) | 271 |
| SetI | ASST | 6 cut(s) | 194, 206, 306, 311, 336, 400 |
| SfaNI | GCATC | 2 cut(s) | 84, 226 |
| SinI | GGWCC | 1 cut(s) | 201 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 80 |
| Sse9I | AATT | 5 cut(s) | 34, 132, 224, 382, 408 |
| SsiI | CCGC | 2 cut(s) | 91, 209 |
| SspMI | CTAG | 1 cut(s) | 177 |
| StyI | CCWWGG | 1 cut(s) | 204 |
| TaaI | ACNGT | 2 cut(s) | 124, 156 |
| TaiI | ACGT | 1 cut(s) | 311 |
| TaqI | TCGA | 2 cut(s) | 316, 343 |
| TaqII | GACCGA | 1 cut(s) | 370 |
| TasI | AATT | 5 cut(s) | 34, 132, 224, 382, 408 |
| Tru1I | TTAA | 1 cut(s) | 27 |
| Tru9I | TTAA | 1 cut(s) | 27 |
| TscAI | CASTG | 4 cut(s) | 72, 129, 159, 246 |
| TseFI | GTSAC | 1 cut(s) | 304 |
| TseI | GCWGC | 2 cut(s) | 173, 251 |
| Tsp45I | GTSAC | 1 cut(s) | 304 |
| TspDTI | ATGAA | 1 cut(s) | 111 |
| TspGWI | ACGGA | 1 cut(s) | 75 |
| TspRI | CASTG | 4 cut(s) | 72, 129, 159, 246 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 18 |
| VpaK11BI | GGWCC | 1 cut(s) | 201 |
| XapI | RAATTY | 1 cut(s) | 224 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 19 |
| XspI | CTAG | 1 cut(s) | 177 |