Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 281 |
| AccBSI | CCGCTC | 1 cut(s) | 242 |
| AciI | CCGC | 1 cut(s) | 240 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 106, 286 |
| AgsI | TTSAA | 2 cut(s) | 52, 251 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 243, 275 |
| AluBI | AGCT | 2 cut(s) | 70, 254 |
| AluI | AGCT | 2 cut(s) | 70, 254 |
| BccI | CCATC | 2 cut(s) | 83, 122 |
| BclI | TGATCA | 1 cut(s) | 223 |
| BfaI | CTAG | 2 cut(s) | 281, 305 |
| BfuAI | ACCTGC | 1 cut(s) | 281 |
| BmsI | GCATC | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 1 cut(s) | 79 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 106, 286 |
| BseDI | CCNNGG | 1 cut(s) | 79 |
| BseGI | GGATG | 3 cut(s) | 133, 345, 400 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 106, 286 |
| BseRI | GAGGAG | 1 cut(s) | 404 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 106, 286 |
| Bsp143I | GATC | 1 cut(s) | 223 |
| BspACI | CCGC | 1 cut(s) | 240 |
| BspMI | ACCTGC | 1 cut(s) | 281 |
| BsrBI | CCGCTC | 1 cut(s) | 242 |
| BssECI | CCNNGG | 1 cut(s) | 79 |
| BssMI | GATC | 1 cut(s) | 223 |
| BssT1I | CCWWGG | 1 cut(s) | 79 |
| Bst4CI | ACNGT | 1 cut(s) | 106 |
| BstDEI | CTNAG | 1 cut(s) | 136 |
| BstF5I | GGATG | 3 cut(s) | 133, 345, 400 |
| BstKTI | GATC | 1 cut(s) | 226 |
| BstMBI | GATC | 1 cut(s) | 223 |
| BtsCI | GGATG | 3 cut(s) | 133, 345, 400 |
| BveI | ACCTGC | 1 cut(s) | 281 |
| CviAII | CATG | 2 cut(s) | 142, 152 |
| CviJI | RGCY | 6 cut(s) | 43, 70, 110, 212, 254, 308 |
| CviKI_1 | RGCY | 6 cut(s) | 43, 70, 110, 212, 254, 308 |
| DdeI | CTNAG | 1 cut(s) | 136 |
| DpnI | GATC | 1 cut(s) | 225 |
| DpnII | GATC | 1 cut(s) | 223 |
| DraI | TTTAAA | 1 cut(s) | 378 |
| Eco130I | CCWWGG | 1 cut(s) | 79 |
| EcoT14I | CCWWGG | 1 cut(s) | 79 |
| ErhI | CCWWGG | 1 cut(s) | 79 |
| FaeI | CATG | 2 cut(s) | 145, 155 |
| FaiI | YATR | 8 cut(s) | 86, 125, 143, 153, 200, 202, 338, 360 |
| FatI | CATG | 2 cut(s) | 141, 151 |
| FauI | CCCGC | 1 cut(s) | 247 |
| FbaI | TGATCA | 1 cut(s) | 223 |
| FokI | GGATG | 3 cut(s) | 140, 332, 407 |
| FspBI | CTAG | 2 cut(s) | 281, 305 |
| Hin1II | CATG | 2 cut(s) | 145, 155 |
| HindIII | AAGCTT | 1 cut(s) | 252 |
| HinfI | GANTC | 1 cut(s) | 323 |
| Hpy188III | TCNNGA | 1 cut(s) | 49 |
| HpyAV | CCTTC | 3 cut(s) | 35, 202, 341 |
| HpyCH4III | ACNGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 3 cut(s) | 276, 340, 403 |
| HpyF3I | CTNAG | 1 cut(s) | 136 |
| Hsp92II | CATG | 2 cut(s) | 145, 155 |
| Ksp22I | TGATCA | 1 cut(s) | 223 |
| Kzo9I | GATC | 1 cut(s) | 223 |
| LmnI | GCTCC | 1 cut(s) | 75 |
| LpnPI | CCDG | 4 cut(s) | 14, 96, 212, 286 |
| LweI | GCATC | 1 cut(s) | 412 |
| MaeI | CTAG | 2 cut(s) | 281, 305 |
| MaeIII | GTNAC | 1 cut(s) | 268 |
| MalI | GATC | 1 cut(s) | 225 |
| MbiI | CCGCTC | 1 cut(s) | 242 |
| MboI | GATC | 1 cut(s) | 223 |
| MboII | GAAGA | 1 cut(s) | 105 |
| MfeI | CAATTG | 1 cut(s) | 311 |
| MluCI | AATT | 3 cut(s) | 311, 354, 361 |
| MlyI | GAGTC | 1 cut(s) | 317 |
| MnlI | CCTC | 3 cut(s) | 244, 382, 385 |
| MseI | TTAA | 2 cut(s) | 33, 377 |
| MslI | CAYNNNNRTG | 1 cut(s) | 156 |
| MunI | CAATTG | 1 cut(s) | 311 |
| NdeII | GATC | 1 cut(s) | 223 |
| NlaIII | CATG | 2 cut(s) | 145, 155 |
| PleI | GAGTC | 1 cut(s) | 317 |
| PpsI | GAGTC | 1 cut(s) | 317 |
| RseI | CAYNNNNRTG | 1 cut(s) | 156 |
| SaqAI | TTAA | 2 cut(s) | 33, 377 |
| Sau3AI | GATC | 1 cut(s) | 223 |
| SchI | GAGTC | 1 cut(s) | 317 |
| SetI | ASST | 6 cut(s) | 72, 85, 231, 256, 275, 282 |
| SfaNI | GCATC | 1 cut(s) | 412 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 156 |
| Sse9I | AATT | 3 cut(s) | 311, 354, 361 |
| SsiI | CCGC | 1 cut(s) | 240 |
| SspMI | CTAG | 2 cut(s) | 281, 305 |
| StyI | CCWWGG | 1 cut(s) | 79 |
| TaaI | ACNGT | 1 cut(s) | 106 |
| TasI | AATT | 3 cut(s) | 311, 354, 361 |
| Tru1I | TTAA | 2 cut(s) | 33, 377 |
| Tru9I | TTAA | 2 cut(s) | 33, 377 |
| TspDTI | ATGAA | 1 cut(s) | 347 |
| TspGWI | ACGGA | 1 cut(s) | 309 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 86 |
| XspI | CTAG | 2 cut(s) | 281, 305 |