Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 106 - 176 | 8.8e-08 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 510 |
| AarI | CACCTGC | 1 cut(s) | 98 |
| Acc36I | ACCTGC | 1 cut(s) | 98 |
| AccB1I | GGYRCC | 1 cut(s) | 340 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 243 |
| AciI | CCGC | 1 cut(s) | 5 |
| AcoI | YGGCCR | 1 cut(s) | 321 |
| AcuI | CTGAAG | 1 cut(s) | 591 |
| AcyI | GRCGYC | 1 cut(s) | 341 |
| AdeI | CACNNNGTG | 1 cut(s) | 601 |
| AfaI | GTAC | 3 cut(s) | 45, 310, 378 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 239, 243 |
| AgsI | TTSAA | 1 cut(s) | 334 |
| AluBI | AGCT | 1 cut(s) | 527 |
| AluI | AGCT | 1 cut(s) | 527 |
| Alw26I | GTCTC | 1 cut(s) | 231 |
| AoxI | GGCC | 2 cut(s) | 252, 321 |
| ApeKI | GCWGC | 1 cut(s) | 266 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 576 |
| AspLEI | GCGC | 2 cut(s) | 10, 343 |
| AspS9I | GGNCC | 1 cut(s) | 560 |
| AsuHPI | GGTGA | 2 cut(s) | 145, 431 |
| AvaII | GGWCC | 1 cut(s) | 560 |
| BalI | TGGCCA | 1 cut(s) | 323 |
| BanI | GGYRCC | 1 cut(s) | 340 |
| BbvI | GCAGC | 1 cut(s) | 278 |
| BccI | CCATC | 4 cut(s) | 57, 71, 166, 332 |
| BcoDI | GTCTC | 1 cut(s) | 231 |
| BfaI | CTAG | 2 cut(s) | 216, 524 |
| BfoI | RGCGCY | 2 cut(s) | 11, 344 |
| BfuAI | ACCTGC | 1 cut(s) | 98 |
| BisI | GCNGC | 2 cut(s) | 6, 267 |
| BlsI | GCNGC | 2 cut(s) | 7, 268 |
| BmcAI | AGTACT | 1 cut(s) | 45 |
| Bme18I | GGWCC | 1 cut(s) | 560 |
| BmgT120I | GGNCC | 1 cut(s) | 560 |
| BmiI | GGNNCC | 1 cut(s) | 342 |
| BmrI | ACTGGG | 1 cut(s) | 35 |
| BmsI | GCATC | 1 cut(s) | 253 |
| BmuI | ACTGGG | 1 cut(s) | 35 |
| BoxI | GACNNNNGTC | 1 cut(s) | 223 |
| BsaHI | GRCGYC | 1 cut(s) | 341 |
| BsaI | GGTCTC | 1 cut(s) | 231 |
| BsaJI | CCNNGG | 2 cut(s) | 139, 221 |
| BsaWI | WCCGGW | 1 cut(s) | 199 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 239, 243 |
| Bse1I | ACTGG | 1 cut(s) | 41 |
| Bse3DI | GCAATG | 2 cut(s) | 17, 459 |
| BseDI | CCNNGG | 2 cut(s) | 139, 221 |
| BseGI | GGATG | 1 cut(s) | 126 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 239, 243 |
| BseMI | GCAATG | 2 cut(s) | 17, 459 |
| BseNI | ACTGG | 1 cut(s) | 41 |
| BseRI | GAGGAG | 3 cut(s) | 96, 219, 222 |
| BseXI | GCAGC | 1 cut(s) | 278 |
| BshFI | GGCC | 2 cut(s) | 254, 323 |
| BshNI | GGYRCC | 1 cut(s) | 340 |
| BsiSI | CCGG | 2 cut(s) | 25, 200 |
| BslFI | GGGAC | 1 cut(s) | 23 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 239, 243 |
| BsmAI | GTCTC | 1 cut(s) | 231 |
| BsmFI | GGGAC | 1 cut(s) | 23 |
| BsmI | GAATGC | 1 cut(s) | 576 |
| BsnI | GGCC | 2 cut(s) | 254, 323 |
| Bso31I | GGTCTC | 1 cut(s) | 231 |
| Bsp1407I | TGTACA | 1 cut(s) | 308 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 2 cut(s) | 254, 323 |
| BspLI | GGNNCC | 1 cut(s) | 342 |
| BspMI | ACCTGC | 1 cut(s) | 98 |
| BspT107I | GGYRCC | 1 cut(s) | 340 |
| BspTNI | GGTCTC | 1 cut(s) | 231 |
| BsrDI | GCAATG | 2 cut(s) | 17, 459 |
| BsrGI | TGTACA | 1 cut(s) | 308 |
| BsrI | ACTGG | 1 cut(s) | 41 |
| BssECI | CCNNGG | 2 cut(s) | 139, 221 |
| BssNI | GRCGYC | 1 cut(s) | 341 |
| BssT1I | CCWWGG | 1 cut(s) | 221 |
| Bst4CI | ACNGT | 2 cut(s) | 103, 462 |
| Bst6I | CTCTTC | 2 cut(s) | 65, 570 |
| BstACI | GRCGYC | 1 cut(s) | 341 |
| BstAUI | TGTACA | 1 cut(s) | 308 |
| BstC8I | GCNNGC | 1 cut(s) | 368 |
| BstDEI | CTNAG | 1 cut(s) | 259 |
| BstDSI | CCRYGG | 1 cut(s) | 139 |
| BstEII | GGTNACC | 1 cut(s) | 133 |
| BstF5I | GGATG | 1 cut(s) | 126 |
| BstH2I | RGCGCY | 2 cut(s) | 11, 344 |
| BstHHI | GCGC | 2 cut(s) | 10, 343 |
| BstMAI | GTCTC | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 524, 582 |
| BstNSI | RCATGY | 1 cut(s) | 315 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 223 |
| BstPI | GGTNACC | 1 cut(s) | 133 |
| BstV1I | GCAGC | 1 cut(s) | 278 |
| BsuRI | GGCC | 2 cut(s) | 254, 323 |
| BtgI | CCRYGG | 1 cut(s) | 139 |
| BtsCI | GGATG | 1 cut(s) | 126 |
| BtsIMutI | CAGTG | 1 cut(s) | 467 |
| BveI | ACCTGC | 1 cut(s) | 98 |
| Cac8I | GCNNGC | 1 cut(s) | 368 |
| CfoI | GCGC | 2 cut(s) | 10, 343 |
| Cfr13I | GGNCC | 1 cut(s) | 560 |
| CseI | GACGC | 1 cut(s) | 25 |
| Csp6I | GTAC | 3 cut(s) | 44, 309, 377 |
| CviAII | CATG | 3 cut(s) | 312, 479, 581 |
| CviJI | RGCY | 7 cut(s) | 254, 282, 323, 506, 527, 540, 585 |
| CviKI_1 | RGCY | 7 cut(s) | 254, 282, 323, 506, 527, 540, 585 |
| CviQI | GTAC | 3 cut(s) | 44, 309, 377 |
| DdeI | CTNAG | 1 cut(s) | 259 |
| DinI | GGCGCC | 1 cut(s) | 342 |
| DraI | TTTAAA | 1 cut(s) | 163 |
| DraIII | CACNNNGTG | 1 cut(s) | 601 |
| EaeI | YGGCCR | 1 cut(s) | 321 |
| Eam1104I | CTCTTC | 2 cut(s) | 65, 570 |
| EarI | CTCTTC | 2 cut(s) | 65, 570 |
| Eco130I | CCWWGG | 1 cut(s) | 221 |
| Eco31I | GGTCTC | 1 cut(s) | 231 |
| Eco47I | GGWCC | 1 cut(s) | 560 |
| Eco57I | CTGAAG | 1 cut(s) | 591 |
| Eco91I | GGTNACC | 1 cut(s) | 133 |
| EcoO65I | GGTNACC | 1 cut(s) | 133 |
| EcoT14I | CCWWGG | 1 cut(s) | 221 |
| EgeI | GGCGCC | 1 cut(s) | 342 |
| EheI | GGCGCC | 1 cut(s) | 342 |
| ErhI | CCWWGG | 1 cut(s) | 221 |
| FaeI | CATG | 3 cut(s) | 315, 482, 584 |
| FaiI | YATR | 7 cut(s) | 92, 271, 273, 313, 480, 510, 582 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 242, 274 |
| FaqI | GGGAC | 1 cut(s) | 23 |
| FatI | CATG | 3 cut(s) | 311, 478, 580 |
| FauNDI | CATATG | 1 cut(s) | 271 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 267 |
| FokI | GGATG | 1 cut(s) | 133 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 267 |
| FspBI | CTAG | 2 cut(s) | 216, 524 |
| GlaI | GCGC | 2 cut(s) | 9, 342 |
| GluI | GCNGC | 2 cut(s) | 6, 267 |
| HaeII | RGCGCY | 2 cut(s) | 11, 344 |
| HaeIII | GGCC | 2 cut(s) | 254, 323 |
| HapII | CCGG | 2 cut(s) | 25, 200 |
| HgaI | GACGC | 1 cut(s) | 25 |
| HhaI | GCGC | 2 cut(s) | 10, 343 |
| Hin1I | GRCGYC | 1 cut(s) | 341 |
| Hin1II | CATG | 3 cut(s) | 315, 482, 584 |
| Hin6I | GCGC | 2 cut(s) | 8, 341 |
| HinP1I | GCGC | 2 cut(s) | 8, 341 |
| HinfI | GANTC | 5 cut(s) | 176, 196, 356, 407, 491 |
| HpaII | CCGG | 2 cut(s) | 25, 200 |
| HphI | GGTGA | 2 cut(s) | 145, 431 |
| Hpy188I | TCNGA | 2 cut(s) | 288, 361 |
| Hpy188III | TCNNGA | 1 cut(s) | 569 |
| Hpy99I | CGWCG | 1 cut(s) | 210 |
| HpyAV | CCTTC | 2 cut(s) | 382, 566 |
| HpyCH4III | ACNGT | 2 cut(s) | 103, 462 |
| HpyCH4V | TGCA | 2 cut(s) | 266, 370 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 524, 582 |
| HpyF3I | CTNAG | 1 cut(s) | 259 |
| Hsp92I | GRCGYC | 1 cut(s) | 341 |
| Hsp92II | CATG | 3 cut(s) | 315, 482, 584 |
| HspAI | GCGC | 2 cut(s) | 8, 341 |
| KasI | GGCGCC | 1 cut(s) | 340 |
| LmnI | GCTCC | 1 cut(s) | 27 |
| LpnPI | CCDG | 8 cut(s) | 38, 38, 54, 93, 213, 522, 531, 582 |
| Lsp1109I | GCAGC | 1 cut(s) | 278 |
| LweI | GCATC | 1 cut(s) | 253 |
| MaeI | CTAG | 2 cut(s) | 216, 524 |
| MaeIII | GTNAC | 3 cut(s) | 133, 456, 593 |
| MboII | GAAGA | 5 cut(s) | 82, 199, 202, 205, 557 |
| MlsI | TGGCCA | 1 cut(s) | 323 |
| MluNI | TGGCCA | 1 cut(s) | 323 |
| Mly113I | GGCGCC | 1 cut(s) | 341 |
| MlyI | GAGTC | 2 cut(s) | 365, 500 |
| MnlI | CCTC | 9 cut(s) | 74, 110, 240, 243, 385, 391, 415, 424, 573 |
| Mox20I | TGGCCA | 1 cut(s) | 323 |
| MroXI | GAANNNNTTC | 1 cut(s) | 576 |
| MscI | TGGCCA | 1 cut(s) | 323 |
| MseI | TTAA | 3 cut(s) | 162, 248, 438 |
| Msp20I | TGGCCA | 1 cut(s) | 323 |
| MspI | CCGG | 2 cut(s) | 25, 200 |
| Mva1269I | GAATGC | 1 cut(s) | 576 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 524, 582 |
| NarI | GGCGCC | 1 cut(s) | 341 |
| NdeI | CATATG | 1 cut(s) | 271 |
| NlaIII | CATG | 3 cut(s) | 315, 482, 584 |
| NlaIV | GGNNCC | 1 cut(s) | 342 |
| NmuCI | GTSAC | 2 cut(s) | 133, 593 |
| NspI | RCATGY | 1 cut(s) | 315 |
| PaqCI | CACCTGC | 1 cut(s) | 98 |
| PctI | GAATGC | 1 cut(s) | 576 |
| PdmI | GAANNNNTTC | 1 cut(s) | 576 |
| PfeI | GAWTC | 3 cut(s) | 176, 196, 407 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 243 |
| PkrI | GCNGC | 2 cut(s) | 7, 268 |
| PleI | GAGTC | 2 cut(s) | 364, 499 |
| PluTI | GGCGCC | 1 cut(s) | 344 |
| PpsI | GAGTC | 2 cut(s) | 364, 499 |
| PshAI | GACNNNNGTC | 1 cut(s) | 223 |
| PsiI | TTATAA | 1 cut(s) | 510 |
| PspEI | GGTNACC | 1 cut(s) | 133 |
| PspN4I | GGNNCC | 1 cut(s) | 342 |
| PspPI | GGNCC | 1 cut(s) | 560 |
| RsaI | GTAC | 3 cut(s) | 45, 310, 378 |
| RsaNI | GTAC | 3 cut(s) | 44, 309, 377 |
| SaqAI | TTAA | 3 cut(s) | 162, 248, 438 |
| SatI | GCNGC | 2 cut(s) | 6, 267 |
| Sau96I | GGNCC | 1 cut(s) | 560 |
| ScaI | AGTACT | 1 cut(s) | 45 |
| SchI | GAGTC | 2 cut(s) | 365, 500 |
| SetI | ASST | 9 cut(s) | 112, 223, 396, 402, 426, 516, 529, 550, 565 |
| SfaNI | GCATC | 1 cut(s) | 253 |
| SfoI | GGCGCC | 1 cut(s) | 342 |
| SinI | GGWCC | 1 cut(s) | 560 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SspDI | GGCGCC | 1 cut(s) | 340 |
| SspMI | CTAG | 2 cut(s) | 216, 524 |
| StyI | CCWWGG | 1 cut(s) | 221 |
| TaaI | ACNGT | 2 cut(s) | 103, 462 |
| TaqI | TCGA | 3 cut(s) | 208, 327, 494 |
| TatI | WGTACW | 2 cut(s) | 43, 308 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TfiI | GAWTC | 3 cut(s) | 176, 196, 407 |
| Tru1I | TTAA | 3 cut(s) | 162, 248, 438 |
| Tru9I | TTAA | 3 cut(s) | 162, 248, 438 |
| TscAI | CASTG | 1 cut(s) | 467 |
| TseFI | GTSAC | 2 cut(s) | 133, 593 |
| TseI | GCWGC | 1 cut(s) | 266 |
| Tsp45I | GTSAC | 2 cut(s) | 133, 593 |
| TspDTI | ATGAA | 2 cut(s) | 467, 569 |
| TspRI | CASTG | 1 cut(s) | 467 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 243 |
| VpaK11BI | GGWCC | 1 cut(s) | 560 |
| XceI | RCATGY | 1 cut(s) | 315 |
| XmnI | GAANNNNTTC | 1 cut(s) | 576 |
| XspI | CTAG | 2 cut(s) | 216, 524 |
| ZrmI | AGTACT | 1 cut(s) | 45 |