Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 338 |
| AciI | CCGC | 2 cut(s) | 338, 404 |
| AcsI | RAATTY | 1 cut(s) | 72 |
| AfaI | GTAC | 2 cut(s) | 145, 505 |
| AgsI | TTSAA | 2 cut(s) | 40, 450 |
| AluBI | AGCT | 3 cut(s) | 101, 154, 446 |
| AluI | AGCT | 3 cut(s) | 101, 154, 446 |
| AoxI | GGCC | 2 cut(s) | 164, 536 |
| ApaI | GGGCCC | 1 cut(s) | 540 |
| ApoI | RAATTY | 1 cut(s) | 72 |
| AspS9I | GGNCC | 2 cut(s) | 536, 537 |
| AsuII | TTCGAA | 1 cut(s) | 199 |
| BaeGI | GKGCMC | 1 cut(s) | 540 |
| BanII | GRGCYC | 1 cut(s) | 540 |
| BauI | CACGAG | 1 cut(s) | 519 |
| BccI | CCATC | 1 cut(s) | 219 |
| BclI | TGATCA | 1 cut(s) | 345 |
| BfaI | CTAG | 2 cut(s) | 102, 291 |
| BfmI | CTRYAG | 2 cut(s) | 147, 571 |
| BmcAI | AGTACT | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 2 cut(s) | 536, 537 |
| BmiI | GGNNCC | 2 cut(s) | 538, 549 |
| BmsI | GCATC | 2 cut(s) | 39, 310 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 307, 339, 415, 447 |
| Bpu14I | TTCGAA | 1 cut(s) | 199 |
| BsaAI | YACGTR | 1 cut(s) | 215 |
| BsaJI | CCNNGG | 1 cut(s) | 314 |
| Bse118I | RCCGGY | 1 cut(s) | 400 |
| Bse1I | ACTGG | 1 cut(s) | 38 |
| BseDI | CCNNGG | 1 cut(s) | 314 |
| BseGI | GGATG | 2 cut(s) | 325, 376 |
| BseNI | ACTGG | 1 cut(s) | 38 |
| BseRI | GAGGAG | 3 cut(s) | 297, 300, 540 |
| BseSI | GKGCMC | 1 cut(s) | 540 |
| BseYI | CCCAGC | 1 cut(s) | 154 |
| BsgI | GTGCAG | 1 cut(s) | 540 |
| Bsh1236I | CGCG | 1 cut(s) | 338 |
| BshFI | GGCC | 2 cut(s) | 166, 538 |
| BsiSI | CCGG | 1 cut(s) | 401 |
| BsnI | GGCC | 2 cut(s) | 166, 538 |
| Bsp119I | TTCGAA | 1 cut(s) | 199 |
| Bsp120I | GGGCCC | 1 cut(s) | 536 |
| Bsp1286I | GDGCHC | 1 cut(s) | 540 |
| Bsp143I | GATC | 1 cut(s) | 345 |
| BspACI | CCGC | 2 cut(s) | 338, 404 |
| BspANI | GGCC | 2 cut(s) | 166, 538 |
| BspFNI | CGCG | 1 cut(s) | 338 |
| BspLI | GGNNCC | 2 cut(s) | 538, 549 |
| BspMAI | CTGCAG | 1 cut(s) | 151 |
| BspT104I | TTCGAA | 1 cut(s) | 199 |
| BsrFI | RCCGGY | 1 cut(s) | 400 |
| BsrI | ACTGG | 1 cut(s) | 38 |
| BssAI | RCCGGY | 1 cut(s) | 400 |
| BssECI | CCNNGG | 1 cut(s) | 314 |
| BssMI | GATC | 1 cut(s) | 345 |
| BssSI | CACGAG | 1 cut(s) | 519 |
| Bst2BI | CACGAG | 1 cut(s) | 519 |
| BstBAI | YACGTR | 1 cut(s) | 215 |
| BstBI | TTCGAA | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstF5I | GGATG | 2 cut(s) | 325, 376 |
| BstFNI | CGCG | 1 cut(s) | 338 |
| BstKTI | GATC | 1 cut(s) | 348 |
| BstMBI | GATC | 1 cut(s) | 345 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 53, 58, 554 |
| BstSFI | CTRYAG | 2 cut(s) | 147, 571 |
| BstSLI | GKGCMC | 1 cut(s) | 540 |
| BstUI | CGCG | 1 cut(s) | 338 |
| BsuRI | GGCC | 2 cut(s) | 166, 538 |
| BtgZI | GCGATG | 1 cut(s) | 62 |
| BtsCI | GGATG | 2 cut(s) | 325, 376 |
| BtsIMutI | CAGTG | 2 cut(s) | 31, 395 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| Cfr10I | RCCGGY | 1 cut(s) | 400 |
| Cfr13I | GGNCC | 2 cut(s) | 536, 537 |
| Csp6I | GTAC | 2 cut(s) | 144, 504 |
| CviAII | CATG | 1 cut(s) | 541 |
| CviJI | RGCY | 9 cut(s) | 101, 116, 154, 166, 274, 446, 538, 548, 590 |
| CviKI_1 | RGCY | 9 cut(s) | 101, 116, 154, 166, 274, 446, 538, 548, 590 |
| CviQI | GTAC | 2 cut(s) | 144, 504 |
| DpnI | GATC | 1 cut(s) | 347 |
| DpnII | GATC | 1 cut(s) | 345 |
| DraI | TTTAAA | 1 cut(s) | 78 |
| EciI | GGCGGA | 1 cut(s) | 419 |
| Eco147I | AGGCCT | 1 cut(s) | 166 |
| Eco24I | GRGCYC | 1 cut(s) | 540 |
| EcoO109I | RGGNCCY | 1 cut(s) | 536 |
| EcoT38I | GRGCYC | 1 cut(s) | 540 |
| FaeI | CATG | 1 cut(s) | 544 |
| FatI | CATG | 1 cut(s) | 540 |
| FbaI | TGATCA | 1 cut(s) | 345 |
| FokI | GGATG | 2 cut(s) | 332, 383 |
| FriOI | GRGCYC | 1 cut(s) | 540 |
| FspBI | CTAG | 2 cut(s) | 102, 291 |
| GsaI | CCCAGC | 1 cut(s) | 158 |
| HaeIII | GGCC | 2 cut(s) | 166, 538 |
| HapII | CCGG | 1 cut(s) | 401 |
| Hin1II | CATG | 1 cut(s) | 544 |
| HindIII | AAGCTT | 1 cut(s) | 444 |
| HinfI | GANTC | 3 cut(s) | 89, 245, 281 |
| HpaII | CCGG | 1 cut(s) | 401 |
| Hpy166II | GTNNAC | 2 cut(s) | 121, 396 |
| Hpy188I | TCNGA | 1 cut(s) | 315 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 278, 521 |
| Hpy8I | GTNNAC | 2 cut(s) | 121, 396 |
| HpyAV | CCTTC | 2 cut(s) | 177, 309 |
| HpyCH4IV | ACGT | 1 cut(s) | 214 |
| HpyCH4V | TGCA | 4 cut(s) | 56, 149, 192, 557 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 53, 58, 554 |
| HpySE526I | ACGT | 1 cut(s) | 214 |
| Hsp92II | CATG | 1 cut(s) | 544 |
| Ksp22I | TGATCA | 1 cut(s) | 345 |
| Kzo9I | GATC | 1 cut(s) | 345 |
| LmnI | GCTCC | 2 cut(s) | 328, 553 |
| LpnPI | CCDG | 6 cut(s) | 19, 99, 140, 414, 451, 567 |
| LweI | GCATC | 2 cut(s) | 39, 310 |
| MaeI | CTAG | 2 cut(s) | 102, 291 |
| MaeII | ACGT | 1 cut(s) | 214 |
| MalI | GATC | 1 cut(s) | 347 |
| MboI | GATC | 1 cut(s) | 345 |
| MboII | GAAGA | 1 cut(s) | 294 |
| MhlI | GDGCHC | 1 cut(s) | 540 |
| MluCI | AATT | 2 cut(s) | 72, 231 |
| MlyI | GAGTC | 1 cut(s) | 254 |
| MnlI | CCTC | 6 cut(s) | 38, 309, 318, 321, 441, 561 |
| MseI | TTAA | 3 cut(s) | 21, 77, 384 |
| MspI | CCGG | 1 cut(s) | 401 |
| MvnI | CGCG | 1 cut(s) | 338 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 53, 58, 554 |
| NdeII | GATC | 1 cut(s) | 345 |
| NlaIII | CATG | 1 cut(s) | 544 |
| NlaIV | GGNNCC | 2 cut(s) | 538, 549 |
| NspV | TTCGAA | 1 cut(s) | 199 |
| PceI | AGGCCT | 1 cut(s) | 166 |
| PfeI | GAWTC | 2 cut(s) | 89, 281 |
| PleI | GAGTC | 1 cut(s) | 253 |
| PpsI | GAGTC | 1 cut(s) | 253 |
| Ppu21I | YACGTR | 1 cut(s) | 215 |
| PspFI | CCCAGC | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 2 cut(s) | 538, 549 |
| PspOMI | GGGCCC | 1 cut(s) | 536 |
| PspPI | GGNCC | 2 cut(s) | 536, 537 |
| PstI | CTGCAG | 1 cut(s) | 151 |
| RsaI | GTAC | 2 cut(s) | 145, 505 |
| RsaNI | GTAC | 2 cut(s) | 144, 504 |
| SaqAI | TTAA | 3 cut(s) | 21, 77, 384 |
| Sau3AI | GATC | 1 cut(s) | 345 |
| Sau96I | GGNCC | 2 cut(s) | 536, 537 |
| ScaI | AGTACT | 1 cut(s) | 145 |
| SchI | GAGTC | 1 cut(s) | 254 |
| SduI | GDGCHC | 1 cut(s) | 540 |
| SetI | ASST | 6 cut(s) | 30, 103, 156, 217, 448, 461 |
| SfaNI | GCATC | 2 cut(s) | 39, 310 |
| SfcI | CTRYAG | 2 cut(s) | 147, 571 |
| SfuI | TTCGAA | 1 cut(s) | 199 |
| SgrAI | CRCCGGYG | 1 cut(s) | 400 |
| Sse9I | AATT | 2 cut(s) | 72, 231 |
| SseBI | AGGCCT | 1 cut(s) | 166 |
| SsiI | CCGC | 2 cut(s) | 338, 404 |
| SspMI | CTAG | 2 cut(s) | 102, 291 |
| StuI | AGGCCT | 1 cut(s) | 166 |
| TaiI | ACGT | 1 cut(s) | 217 |
| TaqI | TCGA | 1 cut(s) | 199 |
| TasI | AATT | 2 cut(s) | 72, 231 |
| TatI | WGTACW | 2 cut(s) | 143, 503 |
| TfiI | GAWTC | 2 cut(s) | 89, 281 |
| Tru1I | TTAA | 3 cut(s) | 21, 77, 384 |
| Tru9I | TTAA | 3 cut(s) | 21, 77, 384 |
| TscAI | CASTG | 2 cut(s) | 38, 395 |
| TspDTI | ATGAA | 1 cut(s) | 464 |
| TspRI | CASTG | 2 cut(s) | 38, 395 |
| XapI | RAATTY | 1 cut(s) | 72 |
| XspI | CTAG | 2 cut(s) | 102, 291 |
| ZrmI | AGTACT | 1 cut(s) | 145 |