Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 152 |
| Acc16I | TGCGCA | 1 cut(s) | 294 |
| AciI | CCGC | 1 cut(s) | 107 |
| AcsI | RAATTY | 1 cut(s) | 97 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AgsI | TTSAA | 3 cut(s) | 50, 97, 255 |
| AluBI | AGCT | 5 cut(s) | 56, 70, 119, 290, 308 |
| AluI | AGCT | 5 cut(s) | 56, 70, 119, 290, 308 |
| Alw26I | GTCTC | 1 cut(s) | 134 |
| ApeKI | GCWGC | 6 cut(s) | 160, 163, 290, 305, 314, 317 |
| ApoI | RAATTY | 1 cut(s) | 97 |
| AspLEI | GCGC | 1 cut(s) | 295 |
| AspS9I | GGNCC | 1 cut(s) | 246 |
| AvaII | GGWCC | 1 cut(s) | 246 |
| BbvI | GCAGC | 6 cut(s) | 172, 175, 277, 301, 304, 317 |
| BcoDI | GTCTC | 1 cut(s) | 134 |
| BfaI | CTAG | 3 cut(s) | 270, 302, 328 |
| BisI | GCNGC | 6 cut(s) | 161, 164, 291, 306, 315, 318 |
| BlsI | GCNGC | 6 cut(s) | 162, 165, 292, 307, 316, 319 |
| Bme18I | GGWCC | 1 cut(s) | 246 |
| BmgT120I | GGNCC | 1 cut(s) | 246 |
| Bse1I | ACTGG | 1 cut(s) | 249 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BseNI | ACTGG | 1 cut(s) | 249 |
| BseXI | GCAGC | 6 cut(s) | 172, 175, 277, 301, 304, 317 |
| BsgI | GTGCAG | 1 cut(s) | 303 |
| BsmAI | GTCTC | 1 cut(s) | 134 |
| BspACI | CCGC | 1 cut(s) | 107 |
| BspCNI | CTCAG | 1 cut(s) | 58 |
| BsrI | ACTGG | 1 cut(s) | 249 |
| Bst4CI | ACNGT | 1 cut(s) | 229 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 311 |
| BstC8I | GCNNGC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 66 |
| BstHHI | GCGC | 1 cut(s) | 295 |
| BstMAI | GTCTC | 1 cut(s) | 134 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 287, 311, 314 |
| BstV1I | GCAGC | 6 cut(s) | 172, 175, 277, 301, 304, 317 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| Cac8I | GCNNGC | 1 cut(s) | 117 |
| CfoI | GCGC | 1 cut(s) | 295 |
| Cfr13I | GGNCC | 1 cut(s) | 246 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 1 cut(s) | 44 |
| CviJI | RGCY | 8 cut(s) | 56, 70, 77, 119, 127, 173, 290, 308 |
| CviKI_1 | RGCY | 8 cut(s) | 56, 70, 77, 119, 127, 173, 290, 308 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DdeI | CTNAG | 1 cut(s) | 66 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 152 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 152 |
| Eco47I | GGWCC | 1 cut(s) | 246 |
| EcoRI | GAATTC | 1 cut(s) | 97 |
| FaeI | CATG | 1 cut(s) | 47 |
| FaiI | YATR | 7 cut(s) | 45, 63, 177, 216, 267, 297, 312 |
| FatI | CATG | 1 cut(s) | 43 |
| Fnu4HI | GCNGC | 6 cut(s) | 161, 164, 291, 306, 315, 318 |
| Fsp4HI | GCNGC | 6 cut(s) | 161, 164, 291, 306, 315, 318 |
| FspBI | CTAG | 3 cut(s) | 270, 302, 328 |
| FspI | TGCGCA | 1 cut(s) | 294 |
| GlaI | GCGC | 1 cut(s) | 294 |
| GluI | GCNGC | 6 cut(s) | 161, 164, 291, 306, 315, 318 |
| HhaI | GCGC | 1 cut(s) | 295 |
| Hin1II | CATG | 1 cut(s) | 47 |
| Hin6I | GCGC | 1 cut(s) | 293 |
| HinP1I | GCGC | 1 cut(s) | 293 |
| HindIII | AAGCTT | 1 cut(s) | 117 |
| Hpy188I | TCNGA | 1 cut(s) | 189 |
| Hpy188III | TCNNGA | 2 cut(s) | 244, 255 |
| HpyCH4III | ACNGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 2 cut(s) | 160, 320 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 287, 311, 314 |
| HpyF3I | CTNAG | 1 cut(s) | 66 |
| Hsp92II | CATG | 1 cut(s) | 47 |
| HspAI | GCGC | 1 cut(s) | 293 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| LpnPI | CCDG | 2 cut(s) | 229, 262 |
| Lsp1109I | GCAGC | 6 cut(s) | 172, 175, 277, 301, 304, 317 |
| MaeI | CTAG | 3 cut(s) | 270, 302, 328 |
| MaeIII | GTNAC | 2 cut(s) | 223, 234 |
| MluCI | AATT | 3 cut(s) | 6, 13, 97 |
| MnlI | CCTC | 1 cut(s) | 267 |
| MseI | TTAA | 1 cut(s) | 27 |
| MslI | CAYNNNNRTG | 2 cut(s) | 180, 197 |
| MspA1I | CMGCKG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 287, 311, 314 |
| NlaIII | CATG | 1 cut(s) | 47 |
| NmuCI | GTSAC | 1 cut(s) | 223 |
| NsbI | TGCGCA | 1 cut(s) | 294 |
| PkrI | GCNGC | 6 cut(s) | 162, 165, 292, 307, 316, 319 |
| PspPI | GGNCC | 1 cut(s) | 246 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 30, 62 |
| PvuII | CAGCTG | 1 cut(s) | 56 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| RseI | CAYNNNNRTG | 2 cut(s) | 180, 197 |
| SaqAI | TTAA | 1 cut(s) | 27 |
| SatI | GCNGC | 6 cut(s) | 161, 164, 291, 306, 315, 318 |
| Sau96I | GGNCC | 1 cut(s) | 246 |
| SetI | ASST | 5 cut(s) | 58, 72, 121, 292, 310 |
| SinI | GGWCC | 1 cut(s) | 246 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 180, 197 |
| Sse9I | AATT | 3 cut(s) | 6, 13, 97 |
| SsiI | CCGC | 1 cut(s) | 107 |
| SspMI | CTAG | 3 cut(s) | 270, 302, 328 |
| TaaI | ACNGT | 1 cut(s) | 229 |
| TasI | AATT | 3 cut(s) | 6, 13, 97 |
| TatI | WGTACW | 1 cut(s) | 37 |
| Tru1I | TTAA | 1 cut(s) | 27 |
| Tru9I | TTAA | 1 cut(s) | 27 |
| TscAI | CASTG | 1 cut(s) | 232 |
| TseFI | GTSAC | 1 cut(s) | 223 |
| TseI | GCWGC | 6 cut(s) | 160, 163, 290, 305, 314, 317 |
| Tsp45I | GTSAC | 1 cut(s) | 223 |
| TspRI | CASTG | 1 cut(s) | 232 |
| VpaK11BI | GGWCC | 1 cut(s) | 246 |
| XapI | RAATTY | 1 cut(s) | 97 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 256 |
| XspI | CTAG | 3 cut(s) | 270, 302, 328 |