Reverse transcriptase-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 54 |
| AfaI | GTAC | 2 cut(s) | 178, 270 |
| AgsI | TTSAA | 1 cut(s) | 121 |
| AluBI | AGCT | 4 cut(s) | 41, 85, 113, 297 |
| AluI | AGCT | 4 cut(s) | 41, 85, 113, 297 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw26I | GTCTC | 1 cut(s) | 315 |
| AoxI | GGCC | 2 cut(s) | 54, 302 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| AspA2I | CCTAGG | 1 cut(s) | 305 |
| AspLEI | GCGC | 1 cut(s) | 13 |
| AsuC2I | CCSGG | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 2 cut(s) | 143, 203 |
| AvrII | CCTAGG | 1 cut(s) | 305 |
| BalI | TGGCCA | 1 cut(s) | 56 |
| BanII | GRGCYC | 1 cut(s) | 266 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvI | GCAGC | 1 cut(s) | 100 |
| BccI | CCATC | 1 cut(s) | 154 |
| BcnI | CCSGG | 1 cut(s) | 129 |
| BcoDI | GTCTC | 1 cut(s) | 315 |
| BfaI | CTAG | 2 cut(s) | 285, 306 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlnI | CCTAGG | 1 cut(s) | 305 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 1 cut(s) | 129 |
| BmrFI | CCNGG | 1 cut(s) | 129 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 80, 112 |
| BpmI | CTGGAG | 1 cut(s) | 107 |
| BpuEI | CTTGAG | 1 cut(s) | 319 |
| BpuMI | CCSGG | 1 cut(s) | 129 |
| BsaI | GGTCTC | 1 cut(s) | 315 |
| BsaJI | CCNNGG | 1 cut(s) | 305 |
| BseDI | CCNNGG | 1 cut(s) | 305 |
| BseGI | GGATG | 1 cut(s) | 38 |
| BseXI | GCAGC | 1 cut(s) | 100 |
| BseYI | CCCAGC | 1 cut(s) | 41 |
| BshFI | GGCC | 2 cut(s) | 56, 304 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiSI | CCGG | 1 cut(s) | 128 |
| BsmAI | GTCTC | 1 cut(s) | 315 |
| BsnI | GGCC | 2 cut(s) | 56, 304 |
| Bso31I | GGTCTC | 1 cut(s) | 315 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 266 |
| BspANI | GGCC | 2 cut(s) | 56, 304 |
| BspTNI | GGTCTC | 1 cut(s) | 315 |
| BssECI | CCNNGG | 1 cut(s) | 305 |
| BssT1I | CCWWGG | 1 cut(s) | 305 |
| Bst6I | CTCTTC | 2 cut(s) | 103, 318 |
| BstF5I | GGATG | 1 cut(s) | 38 |
| BstHHI | GCGC | 1 cut(s) | 13 |
| BstMAI | GTCTC | 1 cut(s) | 315 |
| BstSCI | CCNGG | 1 cut(s) | 127 |
| BstV1I | GCAGC | 1 cut(s) | 100 |
| BsuRI | GGCC | 2 cut(s) | 56, 304 |
| BtsCI | GGATG | 1 cut(s) | 38 |
| CfoI | GCGC | 1 cut(s) | 13 |
| CseI | GACGC | 1 cut(s) | 174 |
| Csp6I | GTAC | 2 cut(s) | 177, 269 |
| CviAII | CATG | 1 cut(s) | 194 |
| CviJI | RGCY | 9 cut(s) | 26, 41, 56, 85, 113, 264, 284, 297, 304 |
| CviKI_1 | RGCY | 9 cut(s) | 26, 41, 56, 85, 113, 264, 284, 297, 304 |
| CviQI | GTAC | 2 cut(s) | 177, 269 |
| EaeI | YGGCCR | 1 cut(s) | 54 |
| Eam1104I | CTCTTC | 2 cut(s) | 103, 318 |
| EarI | CTCTTC | 2 cut(s) | 103, 318 |
| Eco130I | CCWWGG | 1 cut(s) | 305 |
| Eco147I | AGGCCT | 1 cut(s) | 304 |
| Eco24I | GRGCYC | 1 cut(s) | 266 |
| Eco31I | GGTCTC | 1 cut(s) | 315 |
| EcoT14I | CCWWGG | 1 cut(s) | 305 |
| EcoT38I | GRGCYC | 1 cut(s) | 266 |
| ErhI | CCWWGG | 1 cut(s) | 305 |
| FaeI | CATG | 1 cut(s) | 197 |
| FaiI | YATR | 2 cut(s) | 18, 195 |
| FatI | CATG | 1 cut(s) | 193 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| FokI | GGATG | 1 cut(s) | 45 |
| FriOI | GRGCYC | 1 cut(s) | 266 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| FspBI | CTAG | 2 cut(s) | 285, 306 |
| GlaI | GCGC | 1 cut(s) | 12 |
| GluI | GCNGC | 1 cut(s) | 114 |
| GsaI | CCCAGC | 1 cut(s) | 45 |
| GsuI | CTGGAG | 1 cut(s) | 107 |
| HaeIII | GGCC | 2 cut(s) | 56, 304 |
| HapII | CCGG | 1 cut(s) | 128 |
| HgaI | GACGC | 1 cut(s) | 174 |
| HhaI | GCGC | 1 cut(s) | 13 |
| Hin1II | CATG | 1 cut(s) | 197 |
| Hin6I | GCGC | 1 cut(s) | 11 |
| HinP1I | GCGC | 1 cut(s) | 11 |
| HinfI | GANTC | 1 cut(s) | 121 |
| HpaII | CCGG | 1 cut(s) | 128 |
| HphI | GGTGA | 2 cut(s) | 143, 203 |
| Hpy166II | GTNNAC | 1 cut(s) | 177 |
| Hpy188I | TCNGA | 1 cut(s) | 159 |
| Hpy188III | TCNNGA | 3 cut(s) | 169, 225, 331 |
| Hpy8I | GTNNAC | 1 cut(s) | 177 |
| Hpy99I | CGWCG | 1 cut(s) | 190 |
| HpyAV | CCTTC | 2 cut(s) | 67, 251 |
| HpyCH4IV | ACGT | 1 cut(s) | 346 |
| HpyCH4V | TGCA | 1 cut(s) | 116 |
| HpySE526I | ACGT | 1 cut(s) | 346 |
| Hsp92II | CATG | 1 cut(s) | 197 |
| HspAI | GCGC | 1 cut(s) | 11 |
| LpnPI | CCDG | 4 cut(s) | 27, 71, 141, 154 |
| Lsp1109I | GCAGC | 1 cut(s) | 100 |
| MaeI | CTAG | 2 cut(s) | 285, 306 |
| MaeII | ACGT | 1 cut(s) | 346 |
| MboII | GAAGA | 2 cut(s) | 90, 305 |
| MhlI | GDGCHC | 2 cut(s) | 8, 266 |
| MlsI | TGGCCA | 1 cut(s) | 56 |
| MluCI | AATT | 1 cut(s) | 228 |
| MluNI | TGGCCA | 1 cut(s) | 56 |
| MmeI | TCCRAC | 1 cut(s) | 50 |
| MnlI | CCTC | 4 cut(s) | 16, 201, 294, 327 |
| Mox20I | TGGCCA | 1 cut(s) | 56 |
| MscI | TGGCCA | 1 cut(s) | 56 |
| Msp20I | TGGCCA | 1 cut(s) | 56 |
| MspI | CCGG | 1 cut(s) | 128 |
| MspR9I | CCNGG | 1 cut(s) | 129 |
| NciI | CCSGG | 1 cut(s) | 129 |
| NlaIII | CATG | 1 cut(s) | 197 |
| PceI | AGGCCT | 1 cut(s) | 304 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 343 |
| PfeI | GAWTC | 1 cut(s) | 121 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PspFI | CCCAGC | 1 cut(s) | 41 |
| RsaI | GTAC | 2 cut(s) | 178, 270 |
| RsaNI | GTAC | 2 cut(s) | 177, 269 |
| SatI | GCNGC | 1 cut(s) | 114 |
| ScrFI | CCNGG | 1 cut(s) | 129 |
| SduI | GDGCHC | 2 cut(s) | 8, 266 |
| SetI | ASST | 7 cut(s) | 43, 70, 87, 115, 299, 311, 349 |
| SmlI | CTYRAG | 1 cut(s) | 298 |
| SmoI | CTYRAG | 1 cut(s) | 298 |
| Sse9I | AATT | 1 cut(s) | 228 |
| SseBI | AGGCCT | 1 cut(s) | 304 |
| SspMI | CTAG | 2 cut(s) | 285, 306 |
| StuI | AGGCCT | 1 cut(s) | 304 |
| StyD4I | CCNGG | 1 cut(s) | 127 |
| StyI | CCWWGG | 1 cut(s) | 305 |
| TaiI | ACGT | 1 cut(s) | 349 |
| TaqI | TCGA | 1 cut(s) | 226 |
| TasI | AATT | 1 cut(s) | 228 |
| TatI | WGTACW | 1 cut(s) | 176 |
| TfiI | GAWTC | 1 cut(s) | 121 |
| TseI | GCWGC | 1 cut(s) | 113 |
| TspDTI | ATGAA | 1 cut(s) | 50 |
| XmaJI | CCTAGG | 1 cut(s) | 305 |
| XspI | CTAG | 2 cut(s) | 285, 306 |