ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 268 |
| AccI | GTMKAC | 1 cut(s) | 67 |
| AciI | CCGC | 1 cut(s) | 196 |
| AfaI | GTAC | 1 cut(s) | 239 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 268 |
| AgsI | TTSAA | 2 cut(s) | 86, 152 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 200, 232 |
| AsuC2I | CCSGG | 1 cut(s) | 242 |
| BbvCI | CCTCAGC | 1 cut(s) | 284 |
| BcnI | CCSGG | 1 cut(s) | 242 |
| Bme1390I | CCNGG | 1 cut(s) | 242 |
| BmrFI | CCNGG | 1 cut(s) | 242 |
| Bpu10I | CCTNAGC | 1 cut(s) | 284 |
| BpuMI | CCSGG | 1 cut(s) | 242 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 268 |
| BseGI | GGATG | 2 cut(s) | 100, 190 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 268 |
| BseMII | CTCAG | 1 cut(s) | 275 |
| BsiSI | CCGG | 1 cut(s) | 241 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 268 |
| Bsp143I | GATC | 1 cut(s) | 99 |
| BspACI | CCGC | 1 cut(s) | 196 |
| BspCNI | CTCAG | 1 cut(s) | 276 |
| BspHI | TCATGA | 1 cut(s) | 205 |
| BssMI | GATC | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 2 cut(s) | 139, 254 |
| BstC8I | GCNNGC | 3 cut(s) | 7, 194, 270 |
| BstDEI | CTNAG | 1 cut(s) | 284 |
| BstF5I | GGATG | 2 cut(s) | 100, 190 |
| BstKTI | GATC | 1 cut(s) | 102 |
| BstMBI | GATC | 1 cut(s) | 99 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 29 |
| BstSCI | CCNGG | 1 cut(s) | 240 |
| BtsCI | GGATG | 2 cut(s) | 100, 190 |
| Cac8I | GCNNGC | 3 cut(s) | 7, 194, 270 |
| CciI | TCATGA | 1 cut(s) | 205 |
| Csp6I | GTAC | 1 cut(s) | 238 |
| CviAII | CATG | 3 cut(s) | 59, 206, 233 |
| CviJI | RGCY | 5 cut(s) | 47, 125, 260, 268, 272 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 125, 260, 268, 272 |
| CviQI | GTAC | 1 cut(s) | 238 |
| DdeI | CTNAG | 1 cut(s) | 284 |
| DpnI | GATC | 1 cut(s) | 101 |
| DpnII | GATC | 1 cut(s) | 99 |
| FaeI | CATG | 3 cut(s) | 62, 209, 236 |
| FaiI | YATR | 9 cut(s) | 21, 39, 41, 60, 122, 201, 207, 234, 264 |
| FatI | CATG | 3 cut(s) | 58, 205, 232 |
| FauNDI | CATATG | 1 cut(s) | 39 |
| FblI | GTMKAC | 1 cut(s) | 67 |
| FokI | GGATG | 2 cut(s) | 107, 197 |
| HapII | CCGG | 1 cut(s) | 241 |
| Hin1II | CATG | 3 cut(s) | 62, 209, 236 |
| HinfI | GANTC | 1 cut(s) | 50 |
| HpaII | CCGG | 1 cut(s) | 241 |
| Hpy166II | GTNNAC | 3 cut(s) | 68, 223, 238 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 206 |
| Hpy8I | GTNNAC | 3 cut(s) | 68, 223, 238 |
| HpyAV | CCTTC | 2 cut(s) | 64, 80 |
| HpyCH4III | ACNGT | 2 cut(s) | 139, 254 |
| HpyCH4V | TGCA | 1 cut(s) | 192 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 284 |
| Hsp92II | CATG | 3 cut(s) | 62, 209, 236 |
| Kzo9I | GATC | 1 cut(s) | 99 |
| LpnPI | CCDG | 4 cut(s) | 37, 160, 254, 254 |
| MaeIII | GTNAC | 1 cut(s) | 139 |
| MalI | GATC | 1 cut(s) | 101 |
| MboI | GATC | 1 cut(s) | 99 |
| MluCI | AATT | 1 cut(s) | 129 |
| MnlI | CCTC | 2 cut(s) | 37, 279 |
| MspI | CCGG | 1 cut(s) | 241 |
| MspR9I | CCNGG | 1 cut(s) | 242 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 29 |
| NciI | CCSGG | 1 cut(s) | 242 |
| NdeI | CATATG | 1 cut(s) | 39 |
| NdeII | GATC | 1 cut(s) | 99 |
| NlaIII | CATG | 3 cut(s) | 62, 209, 236 |
| PagI | TCATGA | 1 cut(s) | 205 |
| PfeI | GAWTC | 1 cut(s) | 50 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 268 |
| RsaI | GTAC | 1 cut(s) | 239 |
| RsaNI | GTAC | 1 cut(s) | 238 |
| Sau3AI | GATC | 1 cut(s) | 99 |
| ScrFI | CCNGG | 1 cut(s) | 242 |
| SetI | ASST | 4 cut(s) | 67, 91, 279, 290 |
| Sse9I | AATT | 1 cut(s) | 129 |
| SsiI | CCGC | 1 cut(s) | 196 |
| StyD4I | CCNGG | 1 cut(s) | 240 |
| TaaI | ACNGT | 2 cut(s) | 139, 254 |
| TaqI | TCGA | 1 cut(s) | 102 |
| TasI | AATT | 1 cut(s) | 129 |
| TfiI | GAWTC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 1 cut(s) | 194 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 268 |
| XmiI | GTMKAC | 1 cut(s) | 67 |