Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 534 |
| AccB1I | GGYRCC | 1 cut(s) | 155 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 442 |
| AcoI | YGGCCR | 2 cut(s) | 273, 524 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 66, 332, 438, 442, 578 |
| AflIII | ACRYGT | 1 cut(s) | 226 |
| AgsI | TTSAA | 3 cut(s) | 345, 371, 585 |
| AjiI | CACGTC | 1 cut(s) | 229 |
| AjnI | CCWGG | 1 cut(s) | 609 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 493, 525 |
| AluBI | AGCT | 4 cut(s) | 18, 41, 543, 588 |
| AluI | AGCT | 4 cut(s) | 18, 41, 543, 588 |
| Alw26I | GTCTC | 2 cut(s) | 235, 593 |
| AoxI | GGCC | 3 cut(s) | 273, 482, 524 |
| ApeKI | GCWGC | 1 cut(s) | 38 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 114, 146 |
| BalI | TGGCCA | 1 cut(s) | 526 |
| BanI | GGYRCC | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 50 |
| BccI | CCATC | 2 cut(s) | 456, 468 |
| BciT130I | CCWGG | 1 cut(s) | 611 |
| BcoDI | GTCTC | 2 cut(s) | 235, 593 |
| BfaI | CTAG | 1 cut(s) | 388 |
| BfmI | CTRYAG | 1 cut(s) | 213 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 177 |
| BisI | GCNGC | 1 cut(s) | 39 |
| BlsI | GCNGC | 1 cut(s) | 40 |
| Bme1390I | CCNGG | 1 cut(s) | 611 |
| BmgBI | CACGTC | 1 cut(s) | 229 |
| BmiI | GGNNCC | 2 cut(s) | 58, 157 |
| BmrFI | CCNGG | 1 cut(s) | 611 |
| BmrI | ACTGGG | 1 cut(s) | 567 |
| BmuI | ACTGGG | 1 cut(s) | 567 |
| BpmI | CTGGAG | 1 cut(s) | 559 |
| BsaJI | CCNNGG | 2 cut(s) | 61, 436 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 493, 523 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 66, 332, 438, 442, 578 |
| Bse118I | RCCGGY | 1 cut(s) | 275 |
| Bse1I | ACTGG | 4 cut(s) | 181, 542, 550, 573 |
| BseBI | CCWGG | 1 cut(s) | 611 |
| BseDI | CCNNGG | 2 cut(s) | 61, 436 |
| BseGI | GGATG | 1 cut(s) | 467 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 66, 332, 438, 442, 578 |
| BseNI | ACTGG | 4 cut(s) | 181, 542, 550, 573 |
| BseXI | GCAGC | 1 cut(s) | 50 |
| BseYI | CCCAGC | 1 cut(s) | 594 |
| BsgI | GTGCAG | 1 cut(s) | 379 |
| BshFI | GGCC | 3 cut(s) | 275, 484, 526 |
| BshNI | GGYRCC | 1 cut(s) | 155 |
| BsiSI | CCGG | 1 cut(s) | 276 |
| BslFI | GGGAC | 1 cut(s) | 418 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 66, 332, 438, 442, 578 |
| BsmAI | GTCTC | 2 cut(s) | 235, 593 |
| BsmBI | CGTCTC | 1 cut(s) | 235 |
| BsmFI | GGGAC | 1 cut(s) | 418 |
| BsnI | GGCC | 3 cut(s) | 275, 484, 526 |
| BspANI | GGCC | 3 cut(s) | 275, 484, 526 |
| BspLI | GGNNCC | 2 cut(s) | 58, 157 |
| BspT107I | GGYRCC | 1 cut(s) | 155 |
| BsrFI | RCCGGY | 1 cut(s) | 275 |
| BsrI | ACTGG | 4 cut(s) | 181, 542, 550, 573 |
| BssAI | RCCGGY | 1 cut(s) | 275 |
| BssECI | CCNNGG | 2 cut(s) | 61, 436 |
| BssT1I | CCWWGG | 1 cut(s) | 61 |
| Bst2UI | CCWGG | 1 cut(s) | 611 |
| Bst4CI | ACNGT | 7 cut(s) | 119, 126, 151, 217, 271, 358, 411 |
| BstC8I | GCNNGC | 1 cut(s) | 482 |
| BstDEI | CTNAG | 1 cut(s) | 313 |
| BstDSI | CCRYGG | 1 cut(s) | 436 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 330 |
| BstF5I | GGATG | 1 cut(s) | 467 |
| BstMAI | GTCTC | 2 cut(s) | 235, 593 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 177 |
| BstNI | CCWGG | 1 cut(s) | 611 |
| BstSCI | CCNGG | 1 cut(s) | 609 |
| BstSFI | CTRYAG | 1 cut(s) | 213 |
| BstV1I | GCAGC | 1 cut(s) | 50 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 492 |
| BsuRI | GGCC | 3 cut(s) | 275, 484, 526 |
| BtgI | CCRYGG | 1 cut(s) | 436 |
| BtrI | CACGTC | 1 cut(s) | 229 |
| BtsCI | GGATG | 1 cut(s) | 467 |
| BtsI | GCAGTG | 1 cut(s) | 355 |
| BtsIMutI | CAGTG | 4 cut(s) | 115, 354, 355, 557 |
| Cac8I | GCNNGC | 1 cut(s) | 482 |
| Cfr10I | RCCGGY | 1 cut(s) | 275 |
| CviAII | CATG | 2 cut(s) | 168, 458 |
| DdeI | CTNAG | 1 cut(s) | 313 |
| EaeI | YGGCCR | 2 cut(s) | 273, 524 |
| Eco130I | CCWWGG | 1 cut(s) | 61 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 330 |
| EcoRII | CCWGG | 1 cut(s) | 609 |
| EcoT14I | CCWWGG | 1 cut(s) | 61 |
| ErhI | CCWWGG | 1 cut(s) | 61 |
| Esp3I | CGTCTC | 1 cut(s) | 235 |
| FaeI | CATG | 2 cut(s) | 171, 461 |
| FaqI | GGGAC | 1 cut(s) | 418 |
| FatI | CATG | 2 cut(s) | 167, 457 |
| Fnu4HI | GCNGC | 1 cut(s) | 39 |
| FokI | GGATG | 1 cut(s) | 474 |
| Fsp4HI | GCNGC | 1 cut(s) | 39 |
| FspBI | CTAG | 1 cut(s) | 388 |
| GluI | GCNGC | 1 cut(s) | 39 |
| GsaI | CCCAGC | 1 cut(s) | 598 |
| GsuI | CTGGAG | 1 cut(s) | 559 |
| HaeIII | GGCC | 3 cut(s) | 275, 484, 526 |
| HapII | CCGG | 1 cut(s) | 276 |
| Hin1II | CATG | 2 cut(s) | 171, 461 |
| HincII | GTYRAC | 1 cut(s) | 455 |
| HindII | GTYRAC | 1 cut(s) | 455 |
| HindIII | AAGCTT | 1 cut(s) | 586 |
| HinfI | GANTC | 2 cut(s) | 99, 425 |
| HpaII | CCGG | 1 cut(s) | 276 |
| Hpy166II | GTNNAC | 2 cut(s) | 122, 455 |
| Hpy188III | TCNNGA | 2 cut(s) | 138, 513 |
| Hpy8I | GTNNAC | 2 cut(s) | 122, 455 |
| HpyAV | CCTTC | 3 cut(s) | 46, 267, 513 |
| HpyCH4III | ACNGT | 7 cut(s) | 119, 126, 151, 217, 271, 358, 411 |
| HpyCH4IV | ACGT | 1 cut(s) | 228 |
| HpyCH4V | TGCA | 1 cut(s) | 396 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 177 |
| HpyF3I | CTNAG | 1 cut(s) | 313 |
| HpySE526I | ACGT | 1 cut(s) | 228 |
| Hsp92II | CATG | 2 cut(s) | 171, 461 |
| LmnI | GCTCC | 1 cut(s) | 540 |
| Lsp1109I | GCAGC | 1 cut(s) | 50 |
| MaeI | CTAG | 1 cut(s) | 388 |
| MaeII | ACGT | 1 cut(s) | 228 |
| MaeIII | GTNAC | 2 cut(s) | 265, 350 |
| MboII | GAAGA | 3 cut(s) | 105, 178, 255 |
| MfeI | CAATTG | 1 cut(s) | 199 |
| MlsI | TGGCCA | 1 cut(s) | 526 |
| MluCI | AATT | 1 cut(s) | 199 |
| MluNI | TGGCCA | 1 cut(s) | 526 |
| MlyI | GAGTC | 2 cut(s) | 108, 434 |
| MnlI | CCTC | 6 cut(s) | 63, 83, 200, 336, 424, 439 |
| Mox20I | TGGCCA | 1 cut(s) | 526 |
| MscI | TGGCCA | 1 cut(s) | 526 |
| MseI | TTAA | 1 cut(s) | 448 |
| MslI | CAYNNNNRTG | 1 cut(s) | 490 |
| Msp20I | TGGCCA | 1 cut(s) | 526 |
| MspI | CCGG | 1 cut(s) | 276 |
| MspR9I | CCNGG | 1 cut(s) | 611 |
| MunI | CAATTG | 1 cut(s) | 199 |
| MvaI | CCWGG | 1 cut(s) | 611 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 177 |
| NlaIII | CATG | 2 cut(s) | 171, 461 |
| NlaIV | GGNNCC | 2 cut(s) | 58, 157 |
| NmuCI | GTSAC | 1 cut(s) | 350 |
| PflFI | GACNNNGTC | 1 cut(s) | 409 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 442 |
| PkrI | GCNGC | 1 cut(s) | 40 |
| PleI | GAGTC | 2 cut(s) | 107, 433 |
| PpsI | GAGTC | 2 cut(s) | 107, 433 |
| PsiI | TTATAA | 1 cut(s) | 534 |
| Psp6I | CCWGG | 1 cut(s) | 609 |
| PspFI | CCCAGC | 1 cut(s) | 594 |
| PspGI | CCWGG | 1 cut(s) | 609 |
| PspN4I | GGNNCC | 2 cut(s) | 58, 157 |
| PsyI | GACNNNGTC | 1 cut(s) | 409 |
| RseI | CAYNNNNRTG | 1 cut(s) | 490 |
| SaqAI | TTAA | 1 cut(s) | 448 |
| SatI | GCNGC | 1 cut(s) | 39 |
| SchI | GAGTC | 2 cut(s) | 108, 434 |
| ScrFI | CCNGG | 1 cut(s) | 611 |
| SetI | ASST | 9 cut(s) | 10, 20, 43, 231, 337, 524, 545, 590, 615 |
| SfcI | CTRYAG | 1 cut(s) | 213 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 490 |
| Sse9I | AATT | 1 cut(s) | 199 |
| SspMI | CTAG | 1 cut(s) | 388 |
| StyD4I | CCNGG | 1 cut(s) | 609 |
| StyI | CCWWGG | 1 cut(s) | 61 |
| TaaI | ACNGT | 7 cut(s) | 119, 126, 151, 217, 271, 358, 411 |
| TaiI | ACGT | 1 cut(s) | 231 |
| TaqI | TCGA | 2 cut(s) | 50, 416 |
| TasI | AATT | 1 cut(s) | 199 |
| Tru1I | TTAA | 1 cut(s) | 448 |
| Tru9I | TTAA | 1 cut(s) | 448 |
| TscAI | CASTG | 4 cut(s) | 122, 355, 361, 557 |
| TseFI | GTSAC | 1 cut(s) | 350 |
| TseI | GCWGC | 1 cut(s) | 38 |
| Tsp45I | GTSAC | 1 cut(s) | 350 |
| TspDTI | ATGAA | 2 cut(s) | 156, 532 |
| TspRI | CASTG | 4 cut(s) | 122, 355, 361, 557 |
| Tth111I | GACNNNGTC | 1 cut(s) | 409 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 442 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 330 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 439, 534 |
| XspI | CTAG | 1 cut(s) | 388 |