ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| p450 | PF00067 | 3 - 204 | 4.7e-31 | Cytochrome P450 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 53 |
| AclWI | GGATC | 2 cut(s) | 225, 335 |
| AcuI | CTGAAG | 1 cut(s) | 555 |
| AfaI | GTAC | 2 cut(s) | 181, 350 |
| AgsI | TTSAA | 5 cut(s) | 21, 172, 254, 504, 577 |
| AjnI | CCWGG | 1 cut(s) | 314 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 28 |
| AluBI | AGCT | 3 cut(s) | 122, 286, 572 |
| AluI | AGCT | 3 cut(s) | 122, 286, 572 |
| Alw26I | GTCTC | 4 cut(s) | 316, 329, 351, 575 |
| AlwI | GGATC | 2 cut(s) | 225, 335 |
| AoxI | GGCC | 1 cut(s) | 487 |
| ApeKI | GCWGC | 3 cut(s) | 119, 380, 569 |
| AseI | ATTAAT | 1 cut(s) | 236 |
| AspS9I | GGNCC | 1 cut(s) | 364 |
| AsuHPI | GGTGA | 1 cut(s) | 152 |
| AvaII | GGWCC | 1 cut(s) | 364 |
| BanI | GGYRCC | 1 cut(s) | 53 |
| BbvI | GCAGC | 3 cut(s) | 131, 367, 581 |
| BciT130I | CCWGG | 1 cut(s) | 316 |
| BciVI | GTATCC | 1 cut(s) | 95 |
| BcoDI | GTCTC | 4 cut(s) | 316, 329, 351, 575 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BfuI | GTATCC | 1 cut(s) | 95 |
| BisI | GCNGC | 3 cut(s) | 120, 381, 570 |
| BlsI | GCNGC | 3 cut(s) | 121, 382, 571 |
| BmcAI | AGTACT | 1 cut(s) | 350 |
| Bme1390I | CCNGG | 1 cut(s) | 316 |
| Bme18I | GGWCC | 1 cut(s) | 364 |
| BmgT120I | GGNCC | 1 cut(s) | 364 |
| BmiI | GGNNCC | 1 cut(s) | 55 |
| BmrFI | CCNGG | 1 cut(s) | 316 |
| BpmI | CTGGAG | 1 cut(s) | 298 |
| BpuEI | CTTGAG | 1 cut(s) | 373 |
| BsaJI | CCNNGG | 1 cut(s) | 12 |
| BsaWI | WCCGGW | 1 cut(s) | 87 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 296, 326 |
| Bse118I | RCCGGY | 1 cut(s) | 383 |
| Bse3DI | GCAATG | 1 cut(s) | 195 |
| BseBI | CCWGG | 1 cut(s) | 316 |
| BseDI | CCNNGG | 1 cut(s) | 12 |
| BseMI | GCAATG | 1 cut(s) | 195 |
| BseMII | CTCAG | 1 cut(s) | 601 |
| BseXI | GCAGC | 3 cut(s) | 131, 367, 581 |
| BshFI | GGCC | 1 cut(s) | 489 |
| BshNI | GGYRCC | 1 cut(s) | 53 |
| BsiSI | CCGG | 2 cut(s) | 88, 384 |
| BsmAI | GTCTC | 4 cut(s) | 316, 329, 351, 575 |
| BsmBI | CGTCTC | 2 cut(s) | 316, 575 |
| BsnI | GGCC | 1 cut(s) | 489 |
| Bsp143I | GATC | 4 cut(s) | 46, 156, 217, 340 |
| BspANI | GGCC | 1 cut(s) | 489 |
| BspCNI | CTCAG | 1 cut(s) | 600 |
| BspLI | GGNNCC | 1 cut(s) | 55 |
| BspPI | GGATC | 2 cut(s) | 225, 335 |
| BspT107I | GGYRCC | 1 cut(s) | 53 |
| BsrDI | GCAATG | 1 cut(s) | 195 |
| BsrFI | RCCGGY | 1 cut(s) | 383 |
| BssAI | RCCGGY | 1 cut(s) | 383 |
| BssECI | CCNNGG | 1 cut(s) | 12 |
| BssMI | GATC | 4 cut(s) | 46, 156, 217, 340 |
| BssT1I | CCWWGG | 1 cut(s) | 12 |
| Bst2UI | CCWGG | 1 cut(s) | 316 |
| Bst4CI | ACNGT | 2 cut(s) | 165, 604 |
| BstDEI | CTNAG | 2 cut(s) | 194, 587 |
| BstKTI | GATC | 4 cut(s) | 49, 159, 220, 343 |
| BstMAI | GTCTC | 4 cut(s) | 316, 329, 351, 575 |
| BstMBI | GATC | 4 cut(s) | 46, 156, 217, 340 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 107, 116 |
| BstNI | CCWGG | 1 cut(s) | 316 |
| BstSCI | CCNGG | 1 cut(s) | 314 |
| BstV1I | GCAGC | 3 cut(s) | 131, 367, 581 |
| BsuI | GTATCC | 1 cut(s) | 95 |
| BsuRI | GGCC | 1 cut(s) | 489 |
| Cfr10I | RCCGGY | 1 cut(s) | 383 |
| Cfr13I | GGNCC | 1 cut(s) | 364 |
| CseI | GACGC | 2 cut(s) | 116, 592 |
| Csp6I | GTAC | 2 cut(s) | 180, 349 |
| CviAII | CATG | 4 cut(s) | 58, 361, 414, 566 |
| CviJI | RGCY | 5 cut(s) | 122, 286, 319, 489, 572 |
| CviKI_1 | RGCY | 5 cut(s) | 122, 286, 319, 489, 572 |
| CviQI | GTAC | 2 cut(s) | 180, 349 |
| DdeI | CTNAG | 2 cut(s) | 194, 587 |
| DpnI | GATC | 4 cut(s) | 48, 158, 219, 342 |
| DpnII | GATC | 4 cut(s) | 46, 156, 217, 340 |
| Eco130I | CCWWGG | 1 cut(s) | 12 |
| Eco147I | AGGCCT | 1 cut(s) | 489 |
| Eco32I | GATATC | 1 cut(s) | 145 |
| Eco47I | GGWCC | 1 cut(s) | 364 |
| Eco57I | CTGAAG | 1 cut(s) | 555 |
| EcoRII | CCWGG | 1 cut(s) | 314 |
| EcoRV | GATATC | 1 cut(s) | 145 |
| EcoT14I | CCWWGG | 1 cut(s) | 12 |
| ErhI | CCWWGG | 1 cut(s) | 12 |
| Esp3I | CGTCTC | 2 cut(s) | 316, 575 |
| FaeI | CATG | 4 cut(s) | 61, 364, 417, 569 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 528, 560 |
| FatI | CATG | 4 cut(s) | 57, 360, 413, 565 |
| FauNDI | CATATG | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 3 cut(s) | 120, 381, 570 |
| Fsp4HI | GCNGC | 3 cut(s) | 120, 381, 570 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GluI | GCNGC | 3 cut(s) | 120, 381, 570 |
| GsuI | CTGGAG | 1 cut(s) | 298 |
| HaeIII | GGCC | 1 cut(s) | 489 |
| HapII | CCGG | 2 cut(s) | 88, 384 |
| HgaI | GACGC | 2 cut(s) | 116, 592 |
| Hin1II | CATG | 4 cut(s) | 61, 364, 417, 569 |
| HinfI | GANTC | 4 cut(s) | 17, 31, 258, 591 |
| HpaII | CCGG | 2 cut(s) | 88, 384 |
| HphI | GGTGA | 1 cut(s) | 152 |
| Hpy188I | TCNGA | 1 cut(s) | 590 |
| Hpy188III | TCNNGA | 5 cut(s) | 28, 63, 169, 269, 443 |
| HpyCH4III | ACNGT | 2 cut(s) | 165, 604 |
| HpyCH4V | TGCA | 5 cut(s) | 435, 464, 521, 556, 569 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 107, 116 |
| HpyF3I | CTNAG | 2 cut(s) | 194, 587 |
| Hsp92II | CATG | 4 cut(s) | 61, 364, 417, 569 |
| Kzo9I | GATC | 4 cut(s) | 46, 156, 217, 340 |
| Lsp1109I | GCAGC | 3 cut(s) | 131, 367, 581 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MalI | GATC | 4 cut(s) | 48, 158, 219, 342 |
| MboI | GATC | 4 cut(s) | 46, 156, 217, 340 |
| MboII | GAAGA | 4 cut(s) | 89, 166, 284, 548 |
| MluCI | AATT | 3 cut(s) | 221, 233, 616 |
| MlyI | GAGTC | 2 cut(s) | 252, 585 |
| MnlI | CCTC | 1 cut(s) | 377 |
| MseI | TTAA | 3 cut(s) | 236, 546, 619 |
| MspI | CCGG | 2 cut(s) | 88, 384 |
| MspR9I | CCNGG | 1 cut(s) | 316 |
| MvaI | CCWGG | 1 cut(s) | 316 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 107, 116 |
| NdeI | CATATG | 1 cut(s) | 204 |
| NdeII | GATC | 4 cut(s) | 46, 156, 217, 340 |
| NlaIII | CATG | 4 cut(s) | 61, 364, 417, 569 |
| NlaIV | GGNNCC | 1 cut(s) | 55 |
| PceI | AGGCCT | 1 cut(s) | 489 |
| PfeI | GAWTC | 2 cut(s) | 17, 31 |
| PflFI | GACNNNGTC | 2 cut(s) | 308, 362 |
| PkrI | GCNGC | 3 cut(s) | 121, 382, 571 |
| PleI | GAGTC | 2 cut(s) | 252, 585 |
| PpsI | GAGTC | 2 cut(s) | 252, 585 |
| PshBI | ATTAAT | 1 cut(s) | 236 |
| Psp6I | CCWGG | 1 cut(s) | 314 |
| PspGI | CCWGG | 1 cut(s) | 314 |
| PspN4I | GGNNCC | 1 cut(s) | 55 |
| PspPI | GGNCC | 1 cut(s) | 364 |
| PsyI | GACNNNGTC | 2 cut(s) | 308, 362 |
| RsaI | GTAC | 2 cut(s) | 181, 350 |
| RsaNI | GTAC | 2 cut(s) | 180, 349 |
| SaqAI | TTAA | 3 cut(s) | 236, 546, 619 |
| SatI | GCNGC | 3 cut(s) | 120, 381, 570 |
| Sau3AI | GATC | 4 cut(s) | 46, 156, 217, 340 |
| Sau96I | GGNCC | 1 cut(s) | 364 |
| ScaI | AGTACT | 1 cut(s) | 350 |
| SchI | GAGTC | 2 cut(s) | 252, 585 |
| ScrFI | CCNGG | 1 cut(s) | 316 |
| SetI | ASST | 5 cut(s) | 14, 124, 288, 531, 574 |
| SinI | GGWCC | 1 cut(s) | 364 |
| SmlI | CTYRAG | 1 cut(s) | 352 |
| SmoI | CTYRAG | 1 cut(s) | 352 |
| Sse9I | AATT | 3 cut(s) | 221, 233, 616 |
| SseBI | AGGCCT | 1 cut(s) | 489 |
| SspMI | CTAG | 1 cut(s) | 50 |
| StuI | AGGCCT | 1 cut(s) | 489 |
| StyD4I | CCNGG | 1 cut(s) | 314 |
| StyI | CCWWGG | 1 cut(s) | 12 |
| TaaI | ACNGT | 2 cut(s) | 165, 604 |
| TaqI | TCGA | 1 cut(s) | 45 |
| TasI | AATT | 3 cut(s) | 221, 233, 616 |
| TatI | WGTACW | 1 cut(s) | 348 |
| TfiI | GAWTC | 2 cut(s) | 17, 31 |
| Tru1I | TTAA | 3 cut(s) | 236, 546, 619 |
| Tru9I | TTAA | 3 cut(s) | 236, 546, 619 |
| TseI | GCWGC | 3 cut(s) | 119, 380, 569 |
| TspDTI | ATGAA | 5 cut(s) | 17, 90, 221, 402, 528 |
| Tth111I | GACNNNGTC | 2 cut(s) | 308, 362 |
| VpaK11BI | GGWCC | 1 cut(s) | 364 |
| VspI | ATTAAT | 1 cut(s) | 236 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 607 |
| XspI | CTAG | 1 cut(s) | 50 |
| ZrmI | AGTACT | 1 cut(s) | 350 |