ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 524 |
| AclWI | GGATC | 1 cut(s) | 343 |
| AcsI | RAATTY | 1 cut(s) | 357 |
| AcuI | CTGAAG | 1 cut(s) | 603 |
| AfaI | GTAC | 3 cut(s) | 571, 728, 762 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 43, 424 |
| AgsI | TTSAA | 2 cut(s) | 56, 307 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 346, 378 |
| AluBI | AGCT | 6 cut(s) | 313, 423, 432, 461, 772, 825 |
| AluI | AGCT | 6 cut(s) | 313, 423, 432, 461, 772, 825 |
| Alw21I | GWGCWC | 1 cut(s) | 322 |
| AlwI | GGATC | 1 cut(s) | 343 |
| AoxI | GGCC | 2 cut(s) | 69, 515 |
| ApeKI | GCWGC | 1 cut(s) | 530 |
| ApoI | RAATTY | 1 cut(s) | 357 |
| AspS9I | GGNCC | 1 cut(s) | 69 |
| AsuNHI | GCTAGC | 1 cut(s) | 428 |
| AxyI | CCTNAGG | 1 cut(s) | 73 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 588, 621, 744, 777 |
| BbsI | GAAGAC | 1 cut(s) | 265 |
| Bbv12I | GWGCWC | 1 cut(s) | 322 |
| BbvI | GCAGC | 1 cut(s) | 542 |
| BccI | CCATC | 1 cut(s) | 695 |
| BclI | TGATCA | 1 cut(s) | 228 |
| BfaI | CTAG | 4 cut(s) | 410, 429, 507, 822 |
| BfuAI | ACCTGC | 1 cut(s) | 524 |
| BisI | GCNGC | 1 cut(s) | 531 |
| BlsI | GCNGC | 1 cut(s) | 532 |
| BmgT120I | GGNCC | 1 cut(s) | 69 |
| BmiI | GGNNCC | 1 cut(s) | 416 |
| BmsI | GCATC | 2 cut(s) | 435, 622 |
| BmtI | GCTAGC | 1 cut(s) | 432 |
| BpiI | GAAGAC | 1 cut(s) | 265 |
| Bpu10I | CCTNAGC | 1 cut(s) | 552 |
| BpuEI | CTTGAG | 1 cut(s) | 228 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 156, 186 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 43, 424 |
| Bse1I | ACTGG | 1 cut(s) | 153 |
| Bse21I | CCTNAGG | 1 cut(s) | 73 |
| BseGI | GGATG | 1 cut(s) | 637 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 43, 424 |
| BseMII | CTCAG | 3 cut(s) | 87, 335, 566 |
| BseNI | ACTGG | 1 cut(s) | 153 |
| BseXI | GCAGC | 1 cut(s) | 542 |
| BshFI | GGCC | 2 cut(s) | 71, 517 |
| BsiHKAI | GWGCWC | 1 cut(s) | 322 |
| BslFI | GGGAC | 1 cut(s) | 420 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 43, 424 |
| BsmFI | GGGAC | 1 cut(s) | 420 |
| BsmI | GAATGC | 2 cut(s) | 382, 532 |
| BsnI | GGCC | 2 cut(s) | 71, 517 |
| Bsp1286I | GDGCHC | 1 cut(s) | 322 |
| Bsp143I | GATC | 2 cut(s) | 228, 335 |
| BspANI | GGCC | 2 cut(s) | 71, 517 |
| BspCNI | CTCAG | 3 cut(s) | 86, 334, 565 |
| BspHI | TCATGA | 1 cut(s) | 520 |
| BspLI | GGNNCC | 1 cut(s) | 416 |
| BspMI | ACCTGC | 1 cut(s) | 524 |
| BspOI | GCTAGC | 1 cut(s) | 432 |
| BspPI | GGATC | 1 cut(s) | 343 |
| BsrI | ACTGG | 1 cut(s) | 153 |
| BssMI | GATC | 2 cut(s) | 228, 335 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 539 |
| BstC8I | GCNNGC | 2 cut(s) | 430, 450 |
| BstDEI | CTNAG | 5 cut(s) | 73, 203, 321, 552, 653 |
| BstF5I | GGATG | 1 cut(s) | 637 |
| BstKTI | GATC | 2 cut(s) | 231, 338 |
| BstMBI | GATC | 2 cut(s) | 228, 335 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 429, 449, 458, 502, 539, 548 |
| BstV1I | GCAGC | 1 cut(s) | 542 |
| BstV2I | GAAGAC | 1 cut(s) | 265 |
| BstX2I | RGATCY | 1 cut(s) | 335 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 335 |
| Bsu36I | CCTNAGG | 1 cut(s) | 73 |
| BsuRI | GGCC | 2 cut(s) | 71, 517 |
| BtgZI | GCGATG | 1 cut(s) | 458 |
| BtsCI | GGATG | 1 cut(s) | 637 |
| BtsIMutI | CAGTG | 1 cut(s) | 783 |
| BveI | ACCTGC | 1 cut(s) | 524 |
| Cac8I | GCNNGC | 2 cut(s) | 430, 450 |
| CciI | TCATGA | 1 cut(s) | 520 |
| Cfr13I | GGNCC | 1 cut(s) | 69 |
| CseI | GACGC | 1 cut(s) | 259 |
| Csp6I | GTAC | 3 cut(s) | 570, 727, 761 |
| CviAII | CATG | 5 cut(s) | 14, 185, 265, 372, 521 |
| CviQI | GTAC | 3 cut(s) | 570, 727, 761 |
| DdeI | CTNAG | 5 cut(s) | 73, 203, 321, 552, 653 |
| DpnI | GATC | 2 cut(s) | 230, 337 |
| DpnII | GATC | 2 cut(s) | 228, 335 |
| Eco147I | AGGCCT | 1 cut(s) | 517 |
| Eco57I | CTGAAG | 1 cut(s) | 603 |
| Eco81I | CCTNAGG | 1 cut(s) | 73 |
| EcoO109I | RGGNCCY | 1 cut(s) | 69 |
| EcoT22I | ATGCAT | 1 cut(s) | 382 |
| FaeI | CATG | 5 cut(s) | 17, 188, 268, 375, 524 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 722, 754 |
| FaqI | GGGAC | 1 cut(s) | 420 |
| FatI | CATG | 5 cut(s) | 13, 184, 264, 371, 520 |
| FbaI | TGATCA | 1 cut(s) | 228 |
| Fnu4HI | GCNGC | 1 cut(s) | 531 |
| FokI | GGATG | 1 cut(s) | 644 |
| Fsp4HI | GCNGC | 1 cut(s) | 531 |
| FspBI | CTAG | 4 cut(s) | 410, 429, 507, 822 |
| GluI | GCNGC | 1 cut(s) | 531 |
| HaeIII | GGCC | 2 cut(s) | 71, 517 |
| HgaI | GACGC | 1 cut(s) | 259 |
| Hin1II | CATG | 5 cut(s) | 17, 188, 268, 375, 524 |
| HincII | GTYRAC | 2 cut(s) | 178, 781 |
| HindII | GTYRAC | 2 cut(s) | 178, 781 |
| HindIII | AAGCTT | 1 cut(s) | 459 |
| HinfI | GANTC | 3 cut(s) | 40, 179, 817 |
| HpaI | GTTAAC | 1 cut(s) | 781 |
| Hpy166II | GTNNAC | 4 cut(s) | 127, 178, 761, 781 |
| Hpy188I | TCNGA | 3 cut(s) | 393, 562, 622 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 75, 521 |
| Hpy8I | GTNNAC | 4 cut(s) | 127, 178, 761, 781 |
| HpyAV | CCTTC | 2 cut(s) | 395, 657 |
| HpyCH4V | TGCA | 3 cut(s) | 139, 380, 530 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 429, 449, 458, 502, 539, 548 |
| HpyF3I | CTNAG | 5 cut(s) | 73, 203, 321, 552, 653 |
| Hsp92II | CATG | 5 cut(s) | 17, 188, 268, 375, 524 |
| Ksp22I | TGATCA | 1 cut(s) | 228 |
| KspAI | GTTAAC | 1 cut(s) | 781 |
| Kzo9I | GATC | 2 cut(s) | 228, 335 |
| LpnPI | CCDG | 8 cut(s) | 29, 50, 60, 166, 198, 217, 519, 539 |
| Lsp1109I | GCAGC | 1 cut(s) | 542 |
| LweI | GCATC | 2 cut(s) | 435, 622 |
| MaeI | CTAG | 4 cut(s) | 410, 429, 507, 822 |
| MaeIII | GTNAC | 3 cut(s) | 32, 198, 249 |
| MalI | GATC | 2 cut(s) | 230, 337 |
| MboI | GATC | 2 cut(s) | 228, 335 |
| MboII | GAAGA | 7 cut(s) | 38, 155, 265, 311, 410, 609, 826 |
| MfeI | CAATTG | 2 cut(s) | 80, 278 |
| MflI | RGATCY | 1 cut(s) | 335 |
| MhlI | GDGCHC | 1 cut(s) | 322 |
| MluCI | AATT | 9 cut(s) | 80, 88, 278, 357, 436, 487, 589, 689, 800 |
| MlyI | GAGTC | 1 cut(s) | 173 |
| MnlI | CCTC | 6 cut(s) | 60, 82, 459, 528, 616, 660 |
| Mph1103I | ATGCAT | 1 cut(s) | 382 |
| MseI | TTAA | 5 cut(s) | 87, 435, 641, 717, 780 |
| MslI | CAYNNNNRTG | 1 cut(s) | 525 |
| MunI | CAATTG | 2 cut(s) | 80, 278 |
| Mva1269I | GAATGC | 2 cut(s) | 382, 532 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 429, 449, 458, 502, 539, 548 |
| NdeII | GATC | 2 cut(s) | 228, 335 |
| NheI | GCTAGC | 1 cut(s) | 428 |
| NlaIII | CATG | 5 cut(s) | 17, 188, 268, 375, 524 |
| NlaIV | GGNNCC | 1 cut(s) | 416 |
| NsiI | ATGCAT | 1 cut(s) | 382 |
| PagI | TCATGA | 1 cut(s) | 520 |
| PceI | AGGCCT | 1 cut(s) | 517 |
| PctI | GAATGC | 2 cut(s) | 382, 532 |
| PfeI | GAWTC | 2 cut(s) | 40, 817 |
| PkrI | GCNGC | 1 cut(s) | 532 |
| PleI | GAGTC | 1 cut(s) | 173 |
| PpsI | GAGTC | 1 cut(s) | 173 |
| PspN4I | GGNNCC | 1 cut(s) | 416 |
| PspPI | GGNCC | 1 cut(s) | 69 |
| PsuI | RGATCY | 1 cut(s) | 335 |
| RsaI | GTAC | 3 cut(s) | 571, 728, 762 |
| RsaNI | GTAC | 3 cut(s) | 570, 727, 761 |
| RseI | CAYNNNNRTG | 1 cut(s) | 525 |
| SaqAI | TTAA | 5 cut(s) | 87, 435, 641, 717, 780 |
| SatI | GCNGC | 1 cut(s) | 531 |
| Sau3AI | GATC | 2 cut(s) | 228, 335 |
| Sau96I | GGNCC | 1 cut(s) | 69 |
| SchI | GAGTC | 1 cut(s) | 173 |
| SduI | GDGCHC | 1 cut(s) | 322 |
| SfaNI | GCATC | 2 cut(s) | 435, 622 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 525 |
| SmlI | CTYRAG | 1 cut(s) | 243 |
| SmoI | CTYRAG | 1 cut(s) | 243 |
| Sse9I | AATT | 9 cut(s) | 80, 88, 278, 357, 436, 487, 589, 689, 800 |
| SseBI | AGGCCT | 1 cut(s) | 517 |
| SspI | AATATT | 2 cut(s) | 475, 710 |
| SspMI | CTAG | 4 cut(s) | 410, 429, 507, 822 |
| StuI | AGGCCT | 1 cut(s) | 517 |
| TasI | AATT | 9 cut(s) | 80, 88, 278, 357, 436, 487, 589, 689, 800 |
| TfiI | GAWTC | 2 cut(s) | 40, 817 |
| Tru1I | TTAA | 5 cut(s) | 87, 435, 641, 717, 780 |
| Tru9I | TTAA | 5 cut(s) | 87, 435, 641, 717, 780 |
| TscAI | CASTG | 1 cut(s) | 790 |
| TseI | GCWGC | 1 cut(s) | 530 |
| TspDTI | ATGAA | 2 cut(s) | 201, 350 |
| TspGWI | ACGGA | 1 cut(s) | 407 |
| TspRI | CASTG | 1 cut(s) | 790 |
| XapI | RAATTY | 1 cut(s) | 357 |
| XspI | CTAG | 4 cut(s) | 410, 429, 507, 822 |
| Zsp2I | ATGCAT | 1 cut(s) | 382 |